RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 POLR3DP05423 398 aaPredicted RBP7.78□□□□□ -1.16
LINC00397-201ENST00000422074 ORC1Q13415 861 aa7.78□□□□□ -1.16
LINC00397-201ENST00000422074 KIAA1211Q6ZU35 1233 aa7.78□□□□□ -1.16
LINC00397-201ENST00000422074 SOX1O00570 391 aaPredicted RBP7.77□□□□□ -1.17
LINC00397-201ENST00000422074 CDC25BP30305 580 aa7.77□□□□□ -1.17
LINC00397-201ENST00000422074 DCTN4Q9UJW0 460 aa7.77□□□□□ -1.17
LINC00397-201ENST00000422074 EIF4EBP3O60516 100 aaPredicted RBP7.76□□□□□ -1.17
LINC00397-201ENST00000422074 ESRRAP11474 423 aaPredicted RBP7.76□□□□□ -1.17
LINC00397-201ENST00000422074 C19orf57Q0VDD7 668 aa7.76□□□□□ -1.17
LINC00397-201ENST00000422074 DSC3Q14574 896 aa7.76□□□□□ -1.17
LINC00397-201ENST00000422074 NIF3L1Q9GZT8 377 aa7.76□□□□□ -1.17
LINC00397-201ENST00000422074 EIF1AYO14602 144 aaKnown RBP7.75□□□□□ -1.17
LINC00397-201ENST00000422074 DDX3YO15523 660 aaKnown RBP7.75□□□□□ -1.17
LINC00397-201ENST00000422074 ARL4DP49703 201 aa7.75□□□□□ -1.17
LINC00397-201ENST00000422074 IKBKEQ14164 716 aa7.75□□□□□ -1.17
LINC00397-201ENST00000422074 DUOXA2Q1HG44 320 aa7.75□□□□□ -1.17
LINC00397-201ENST00000422074 HGSNATQ68CP4 663 aa7.75□□□□□ -1.17
LINC00397-201ENST00000422074 TMC7Q7Z402 723 aa7.75□□□□□ -1.17
LINC00397-201ENST00000422074 AGGF1Q8N302 714 aaeCLIP7.75□□□□□ -1.17
LINC00397-201ENST00000422074 CCDC74AQ96AQ1 378 aa7.75□□□□□ -1.17
LINC00397-201ENST00000422074 CSRNP1Q96S65 589 aa7.75□□□□□ -1.17
LINC00397-201ENST00000422074 UBL7Q96S82 380 aaPredicted RBP7.75□□□□□ -1.17
LINC00397-201ENST00000422074 LIN7BQ9HAP6 207 aa7.75□□□□□ -1.17
LINC00397-201ENST00000422074 A0A096LPE4 126 aa7.74□□□□□ -1.17
LINC00397-201ENST00000422074 A0A1W2PPZ6 126 aa7.74□□□□□ -1.17
LINC00397-201ENST00000422074 MEGF11A6BM72 1044 aa7.74□□□□□ -1.17
LINC00397-201ENST00000422074 GRIA4P48058 902 aa7.74□□□□□ -1.17
LINC00397-201ENST00000422074 PTPN12Q05209 780 aaKnown RBP7.74□□□□□ -1.17
LINC00397-201ENST00000422074 PRSS36Q5K4E3 855 aa7.74□□□□□ -1.17
LINC00397-201ENST00000422074 PRR23CQ6ZRP0 262 aa7.74□□□□□ -1.17
LINC00397-201ENST00000422074 ACAD11Q709F0 780 aa7.74□□□□□ -1.17
LINC00397-201ENST00000422074 ASAP3Q8TDY4 903 aa7.74□□□□□ -1.17
LINC00397-201ENST00000422074 CEP41Q9BYV8 373 aa7.74□□□□□ -1.17
LINC00397-201ENST00000422074 METTL12A8MUP2 240 aa7.73□□□□□ -1.17
LINC00397-201ENST00000422074 PATL2C9JE40 543 aaKnown RBP7.73□□□□□ -1.17
LINC00397-201ENST00000422074 TREHO43280 583 aa7.73□□□□□ -1.17
LINC00397-201ENST00000422074 ITPKAP23677 461 aa7.73□□□□□ -1.17
LINC00397-201ENST00000422074 UVSSAQ2YD98 709 aa7.73□□□□□ -1.17
LINC00397-201ENST00000422074 PRPF40BQ6NWY9 871 aaKnown RBP7.73□□□□□ -1.17
LINC00397-201ENST00000422074 SLC51AQ86UW1 340 aa7.73□□□□□ -1.17
LINC00397-201ENST00000422074 TMC1Q8TDI8 760 aa7.73□□□□□ -1.17
LINC00397-201ENST00000422074 UBASH3BQ8TF42 649 aa7.73□□□□□ -1.17
LINC00397-201ENST00000422074 SLC7A3Q8WY07 619 aa7.73□□□□□ -1.17
LINC00397-201ENST00000422074 FAM46AQ96IP4 442 aaKnown RBP7.73□□□□□ -1.17
LINC00397-201ENST00000422074 NRSN2Q9GZP1 204 aa7.73□□□□□ -1.17
LINC00397-201ENST00000422074 CLEC4MQ9H2X3 399 aaPredicted RBP7.73□□□□□ -1.17
LINC00397-201ENST00000422074 IVNS1ABPQ9Y6Y0 642 aa7.73□□□□□ -1.17
LINC00397-201ENST00000422074 GLB1P16278 677 aa7.72□□□□□ -1.17
LINC00397-201ENST00000422074 SPRED3Q2MJR0 410 aa7.72□□□□□ -1.17
LINC00397-201ENST00000422074 RNF208Q9H0X6 261 aa7.72□□□□□ -1.17
LINC00397-201ENST00000422074 NPHS2Q9NP85 383 aa7.72□□□□□ -1.17
LINC00397-201ENST00000422074 BIN2Q9UBW5 565 aaPredicted RBP7.72□□□□□ -1.17
LINC00397-201ENST00000422074 ZNF423Q2M1K9 1284 aa7.71□□□□□ -1.18
LINC00397-201ENST00000422074 ARMC10Q8N2F6 343 aa7.71□□□□□ -1.18
LINC00397-201ENST00000422074 TMPRSS13Q9BYE2 586 aa7.71□□□□□ -1.18
LINC00397-201ENST00000422074 LOC100289279A0A1B0GTE1 492 aa7.7□□□□□ -1.18
LINC00397-201ENST00000422074 NLRP12P59046 1061 aa7.7□□□□□ -1.18
LINC00397-201ENST00000422074 PCDH1Q08174 1060 aa7.7□□□□□ -1.18
LINC00397-201ENST00000422074 ANKRD34AQ69YU3 496 aa7.7□□□□□ -1.18
LINC00397-201ENST00000422074 GLIS3Q8NEA6 775 aa7.7□□□□□ -1.18
LINC00397-201ENST00000422074 EHD4Q9H223 541 aa7.7□□□□□ -1.18
LINC00397-201ENST00000422074 ZNF576Q9H609 170 aa7.7□□□□□ -1.18
LINC00397-201ENST00000422074 SUGCTQ9HAC7 445 aa7.7□□□□□ -1.18
LINC00397-201ENST00000422074 ABCB6Q9NP58 842 aa7.7□□□□□ -1.18
LINC00397-201ENST00000422074 B3GALT4O96024 378 aa7.69□□□□□ -1.18
LINC00397-201ENST00000422074 MAPK1P28482 360 aa7.69□□□□□ -1.18
LINC00397-201ENST00000422074 PLCB3Q01970 1234 aa7.69□□□□□ -1.18
LINC00397-201ENST00000422074 ENOX2Q16206 610 aaKnown RBP7.69□□□□□ -1.18
LINC00397-201ENST00000422074 RPS26P11Q5JNZ5 115 aaPredicted RBP7.69□□□□□ -1.18
LINC00397-201ENST00000422074 RUSC1Q9BVN2 902 aa7.69□□□□□ -1.18
LINC00397-201ENST00000422074 TMEM238LA0A1B0GVL6 79 aa7.68□□□□□ -1.18
LINC00397-201ENST00000422074 SMG8Q8ND04 991 aaKnown RBP7.68□□□□□ -1.18
LINC00397-201ENST00000422074 EPS8L3Q8TE67 593 aaKnown RBP7.68□□□□□ -1.18
LINC00397-201ENST00000422074 MYRFLQ96LU7 910 aa7.68□□□□□ -1.18
LINC00397-201ENST00000422074 ASB16Q96NS5 453 aa7.68□□□□□ -1.18
LINC00397-201ENST00000422074 TRAK1Q9UPV9 953 aa7.68□□□□□ -1.18
LINC00397-201ENST00000422074 RAXQ9Y2V3 346 aa7.68□□□□□ -1.18
LINC00397-201ENST00000422074 DHX15O43143 795 aaKnown RBP7.67□□□□□ -1.18
LINC00397-201ENST00000422074 DLGAP3O95886 979 aa7.67□□□□□ -1.18
LINC00397-201ENST00000422074 GSTM4Q03013 218 aa7.67□□□□□ -1.18
LINC00397-201ENST00000422074 FMR1Q06787 632 aaKnown RBP eCLIP7.67□□□□□ -1.18
LINC00397-201ENST00000422074 GRM2Q14416 872 aa7.67□□□□□ -1.18
LINC00397-201ENST00000422074 EXOSC6Q5RKV6 272 aaKnown RBP7.67□□□□□ -1.18
LINC00397-201ENST00000422074 ZMYM1Q5SVZ6 1142 aa7.67□□□□□ -1.18
LINC00397-201ENST00000422074 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.67□□□□□ -1.18
LINC00397-201ENST00000422074 GADD45BO75293 160 aaPredicted RBP7.66□□□□□ -1.18
LINC00397-201ENST00000422074 TIAF1O95411 115 aa7.66□□□□□ -1.18
LINC00397-201ENST00000422074 HIF3AQ9Y2N7 669 aa7.66□□□□□ -1.18
LINC00397-201ENST00000422074 CYP11A1P05108 521 aa7.65□□□□□ -1.18
LINC00397-201ENST00000422074 FSTP19883 344 aa7.65□□□□□ -1.18
LINC00397-201ENST00000422074 PREPP48147 710 aa7.65□□□□□ -1.18
LINC00397-201ENST00000422074 ZSCAN29Q8IWY8 852 aaPredicted RBP7.65□□□□□ -1.18
LINC00397-201ENST00000422074 FAM20CQ8IXL6 584 aa7.65□□□□□ -1.18
LINC00397-201ENST00000422074 Q8N3U1 123 aa7.65□□□□□ -1.18
LINC00397-201ENST00000422074 FBF1Q8TES7 1133 aa7.65□□□□□ -1.18
LINC00397-201ENST00000422074 UTP4Q969X6 686 aaKnown RBP7.65□□□□□ -1.18
LINC00397-201ENST00000422074 TRIM56Q9BRZ2 755 aaKnown RBP7.65□□□□□ -1.18
LINC00397-201ENST00000422074 USP26Q9BXU7 913 aa7.65□□□□□ -1.18
LINC00397-201ENST00000422074 ZFYVE1Q9HBF4 777 aa7.65□□□□□ -1.18
LINC00397-201ENST00000422074 GSC2O15499 205 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms