RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 SDSP20132 328 aa12.36□□□□□ -0.43
PTCH1-206ENST00000421141 BICD1Q96G01 975 aa12.36□□□□□ -0.43
PTCH1-206ENST00000421141 XAGE2Q96GT9 111 aa12.36□□□□□ -0.43
PTCH1-206ENST00000421141 KDRP35968 1356 aa12.36□□□□□ -0.43
PTCH1-206ENST00000421141 SSFA2P28290 1259 aa12.36□□□□□ -0.43
PTCH1-206ENST00000421141 TMC4Q7Z404 712 aa12.36□□□□□ -0.43
PTCH1-206ENST00000421141 KLF18A0A0U1RQI7 1052 aa12.36□□□□□ -0.43
PTCH1-206ENST00000421141 NEURL1BA8MQ27 555 aa12.36□□□□□ -0.43
PTCH1-206ENST00000421141 TAF5LO75529 589 aa12.36□□□□□ -0.43
PTCH1-206ENST00000421141 FRMPD1Q5SYB0 1578 aa12.36□□□□□ -0.43
PTCH1-206ENST00000421141 PPEF1O14829 653 aaPredicted RBP12.36□□□□□ -0.43
PTCH1-206ENST00000421141 PARP1P09874 1014 aaKnown RBP12.36□□□□□ -0.43
PTCH1-206ENST00000421141 HELLSQ9NRZ9 838 aa12.36□□□□□ -0.43
PTCH1-206ENST00000421141 ORC3Q9UBD5 711 aaPredicted RBP12.36□□□□□ -0.43
PTCH1-206ENST00000421141 CCDC171Q6TFL3 1326 aa12.36□□□□□ -0.43
PTCH1-206ENST00000421141 BMP15O95972 392 aa12.35□□□□□ -0.43
PTCH1-206ENST00000421141 TRMT1LQ7Z2T5 733 aaKnown RBP12.35□□□□□ -0.43
PTCH1-206ENST00000421141 ASAP1Q9ULH1 1129 aa12.35□□□□□ -0.43
PTCH1-206ENST00000421141 GNA11P29992 359 aa12.35□□□□□ -0.43
PTCH1-206ENST00000421141 EIF5P55010 431 aaKnown RBP12.35□□□□□ -0.43
PTCH1-206ENST00000421141 HSP90AA2PQ14568 343 aaPredicted RBP12.35□□□□□ -0.43
PTCH1-206ENST00000421141 DALRD3Q5D0E6 543 aaKnown RBP12.35□□□□□ -0.43
PTCH1-206ENST00000421141 AATFQ9NY61 560 aaKnown RBP eCLIP12.35□□□□□ -0.43
PTCH1-206ENST00000421141 LMTK2Q8IWU2 1503 aa12.35□□□□□ -0.43
PTCH1-206ENST00000421141 FKBP15Q5T1M5 1219 aa12.35□□□□□ -0.43
PTCH1-206ENST00000421141 DCAF15Q66K64 600 aa12.35□□□□□ -0.43
PTCH1-206ENST00000421141 TNNI3KQ59H18 835 aa12.35□□□□□ -0.43
PTCH1-206ENST00000421141 MFSD14BQ5SR56 506 aa12.35□□□□□ -0.43
PTCH1-206ENST00000421141 FPGT-TNNI3KV9GXZ4 949 aa12.35□□□□□ -0.43
PTCH1-206ENST00000421141 USP19O94966 1318 aa12.35□□□□□ -0.43
PTCH1-206ENST00000421141 ZNF594Q96JF6 807 aaPredicted RBP12.35□□□□□ -0.43
PTCH1-206ENST00000421141 GJD4Q96KN9 370 aaPredicted RBP12.35□□□□□ -0.43
PTCH1-206ENST00000421141 ECM2O94769 699 aaPredicted RBP12.34□□□□□ -0.43
PTCH1-206ENST00000421141 SLC27A3Q5K4L6 730 aa12.34□□□□□ -0.43
PTCH1-206ENST00000421141 RBM8AQ9Y5S9 174 aaKnown RBP12.34□□□□□ -0.43
PTCH1-206ENST00000421141 TBCAO75347 108 aaKnown RBP12.34□□□□□ -0.43
PTCH1-206ENST00000421141 RNF214Q8ND24 703 aa12.34□□□□□ -0.43
PTCH1-206ENST00000421141 TRIM35Q9UPQ4 493 aa12.34□□□□□ -0.43
PTCH1-206ENST00000421141 RBM25P49756 843 aaKnown RBP12.34□□□□□ -0.43
PTCH1-206ENST00000421141 KANK3Q6NY19 840 aa12.34□□□□□ -0.43
PTCH1-206ENST00000421141 TNNT3P45378 269 aaPredicted RBP12.34□□□□□ -0.43
PTCH1-206ENST00000421141 USPL1Q5W0Q7 1092 aa12.34□□□□□ -0.43
PTCH1-206ENST00000421141 CNNM3Q8NE01 707 aa12.34□□□□□ -0.43
PTCH1-206ENST00000421141 SMCR8Q8TEV9 937 aaPredicted RBP12.34□□□□□ -0.43
PTCH1-206ENST00000421141 AS3MTQ9HBK9 375 aa12.34□□□□□ -0.43
PTCH1-206ENST00000421141 TTF2Q9UNY4 1162 aaKnown RBP12.34□□□□□ -0.43
PTCH1-206ENST00000421141 MBD4O95243 580 aa12.34□□□□□ -0.43
PTCH1-206ENST00000421141 CDR1P51861 262 aa12.34□□□□□ -0.43
PTCH1-206ENST00000421141 NMIQ13287 307 aaPredicted RBP12.34□□□□□ -0.43
PTCH1-206ENST00000421141 KIF22Q14807 665 aa12.34□□□□□ -0.43
PTCH1-206ENST00000421141 PALLDQ8WX93 1383 aa12.34□□□□□ -0.43
PTCH1-206ENST00000421141 SLC5A4Q9NY91 659 aa12.33□□□□□ -0.43
PTCH1-206ENST00000421141 TCP10Q12799 353 aa12.33□□□□□ -0.44
PTCH1-206ENST00000421141 FAM182BQ5T319 152 aa12.33□□□□□ -0.44
PTCH1-206ENST00000421141 USP48Q86UV5 1035 aa12.33□□□□□ -0.44
PTCH1-206ENST00000421141 SPATA5Q8NB90 893 aa12.33□□□□□ -0.44
PTCH1-206ENST00000421141 MAP3K11Q16584 847 aa12.33□□□□□ -0.44
PTCH1-206ENST00000421141 TIMM10P62072 90 aa12.33□□□□□ -0.44
PTCH1-206ENST00000421141 VPS36Q86VN1 386 aa12.33□□□□□ -0.44
PTCH1-206ENST00000421141 ZSCAN16Q9H4T2 348 aaPredicted RBP12.33□□□□□ -0.44
PTCH1-206ENST00000421141 G2E3Q7L622 706 aa12.33□□□□□ -0.44
PTCH1-206ENST00000421141 DCTPP1Q9H773 170 aa12.33□□□□□ -0.44
PTCH1-206ENST00000421141 GPHNQ9NQX3 736 aaPredicted RBP12.33□□□□□ -0.44
PTCH1-206ENST00000421141 USP37Q86T82 979 aa12.33□□□□□ -0.44
PTCH1-206ENST00000421141 CRB1P82279 1406 aa12.33□□□□□ -0.44
PTCH1-206ENST00000421141 GTF2IP78347 998 aa12.32□□□□□ -0.44
PTCH1-206ENST00000421141 MNS1Q8NEH6 495 aa12.32□□□□□ -0.44
PTCH1-206ENST00000421141 IQGAP1P46940 1657 aa12.32□□□□□ -0.44
PTCH1-206ENST00000421141 IRX3P78415 501 aaPredicted RBP12.32□□□□□ -0.44
PTCH1-206ENST00000421141 FERMT3Q86UX7 667 aa12.32□□□□□ -0.44
PTCH1-206ENST00000421141 NCAPD2Q15021 1401 aa12.32□□□□□ -0.44
PTCH1-206ENST00000421141 CTAGE5O15320 804 aa12.32□□□□□ -0.44
PTCH1-206ENST00000421141 PRC1O43663 620 aa12.32□□□□□ -0.44
PTCH1-206ENST00000421141 GJB2P29033 226 aa12.32□□□□□ -0.44
PTCH1-206ENST00000421141 MAP3K9P80192 1104 aa12.32□□□□□ -0.44
PTCH1-206ENST00000421141 ESYT1Q9BSJ8 1104 aa12.32□□□□□ -0.44
PTCH1-206ENST00000421141 ALG1Q9BT22 464 aa12.32□□□□□ -0.44
PTCH1-206ENST00000421141 IBTKQ9P2D0 1353 aaPredicted RBP12.32□□□□□ -0.44
PTCH1-206ENST00000421141 APBB1IPQ7Z5R6 666 aaPredicted RBP12.32□□□□□ -0.44
PTCH1-206ENST00000421141 XDHP47989 1333 aa12.32□□□□□ -0.44
PTCH1-206ENST00000421141 ARHGEF6Q15052 776 aa12.32□□□□□ -0.44
PTCH1-206ENST00000421141 Q6ZUG5 572 aa12.32□□□□□ -0.44
PTCH1-206ENST00000421141 IL17REQ8NFR9 667 aa12.32□□□□□ -0.44
PTCH1-206ENST00000421141 PTCH1Q13635 1447 aa12.32□□□□□ -0.44
PTCH1-206ENST00000421141 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.32□□□□□ -0.44
PTCH1-206ENST00000421141 ERLIN2O94905 339 aa12.32□□□□□ -0.44
PTCH1-206ENST00000421141 ANAPC15P60006 121 aa12.31□□□□□ -0.44
PTCH1-206ENST00000421141 SERPINB2P05120 415 aa12.31□□□□□ -0.44
PTCH1-206ENST00000421141 PABPC4Q13310 644 aaKnown RBP eCLIP12.31□□□□□ -0.44
PTCH1-206ENST00000421141 OTUD7BQ6GQQ9 843 aa12.31□□□□□ -0.44
PTCH1-206ENST00000421141 CCDC174Q6PII3 467 aa12.31□□□□□ -0.44
PTCH1-206ENST00000421141 CETN2P41208 172 aa12.31□□□□□ -0.44
PTCH1-206ENST00000421141 SSR1P43307 286 aaKnown RBP12.31□□□□□ -0.44
PTCH1-206ENST00000421141 KLHL10Q6JEL2 608 aa12.31□□□□□ -0.44
PTCH1-206ENST00000421141 ATP10DQ9P241 1426 aa12.31□□□□□ -0.44
PTCH1-206ENST00000421141 GLT8D2Q9H1C3 349 aa12.31□□□□□ -0.44
PTCH1-206ENST00000421141 IGSF1Q8N6C5 1336 aa12.31□□□□□ -0.44
PTCH1-206ENST00000421141 RAD50Q92878 1312 aa12.31□□□□□ -0.44
PTCH1-206ENST00000421141 FERMT2Q96AC1 680 aa12.3□□□□□ -0.44
PTCH1-206ENST00000421141 ATF5Q9Y2D1 282 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms