RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 ZNF532Q9HCE3 1301 aa19.97■□□□□ 0.79
SSBP3-205ENST00000417664 GOLGA6L22H0YM25 854 aa19.97■□□□□ 0.79
SSBP3-205ENST00000417664 APBA3O96018 575 aa19.97■□□□□ 0.79
SSBP3-205ENST00000417664 SERPINB2P05120 415 aa19.97■□□□□ 0.79
SSBP3-205ENST00000417664 IMMTQ16891 758 aaKnown RBP19.97■□□□□ 0.79
SSBP3-205ENST00000417664 DENND2AQ9ULE3 1009 aa19.97■□□□□ 0.79
SSBP3-205ENST00000417664 TAF6LQ9Y6J9 622 aa19.97■□□□□ 0.79
SSBP3-205ENST00000417664 CRY2Q49AN0 593 aa19.96■□□□□ 0.79
SSBP3-205ENST00000417664 TMED8Q6PL24 325 aaPredicted RBP19.96■□□□□ 0.79
SSBP3-205ENST00000417664 FBXO33Q7Z6M2 555 aa19.96■□□□□ 0.79
SSBP3-205ENST00000417664 VPS37DQ86XT2 251 aa19.96■□□□□ 0.79
SSBP3-205ENST00000417664 TNRC6CQ9HCJ0 1690 aaKnown RBP19.96■□□□□ 0.79
SSBP3-205ENST00000417664 TAF1P21675 1872 aa19.95■□□□□ 0.78
SSBP3-205ENST00000417664 IGSF3O75054 1194 aa19.95■□□□□ 0.78
SSBP3-205ENST00000417664 DHX32Q7L7V1 743 aaKnown RBP19.95■□□□□ 0.78
SSBP3-205ENST00000417664 AKT1S1Q96B36 256 aa19.95■□□□□ 0.78
SSBP3-205ENST00000417664 ZMYM6O95789 1325 aa19.95■□□□□ 0.78
SSBP3-205ENST00000417664 FGAP02671 866 aa19.94■□□□□ 0.78
SSBP3-205ENST00000417664 NLGN1Q8N2Q7 840 aa19.94■□□□□ 0.78
SSBP3-205ENST00000417664 AIDAQ96BJ3 306 aa19.94■□□□□ 0.78
SSBP3-205ENST00000417664 FAM84BQ96KN1 310 aaPredicted RBP19.94■□□□□ 0.78
SSBP3-205ENST00000417664 TFCP2L1Q9NZI6 479 aa19.94■□□□□ 0.78
SSBP3-205ENST00000417664 WWC3Q9ULE0 1092 aa19.94■□□□□ 0.78
SSBP3-205ENST00000417664 EP400Q96L91 3159 aa19.94■□□□□ 0.78
SSBP3-205ENST00000417664 RGPD3A6NKT7 1758 aaPredicted RBP19.94■□□□□ 0.78
SSBP3-205ENST00000417664 RGPD4Q7Z3J3 1758 aa19.94■□□□□ 0.78
SSBP3-205ENST00000417664 E7EWF7 191 aa19.94■□□□□ 0.78
SSBP3-205ENST00000417664 FOXP2O15409 715 aa19.94■□□□□ 0.78
SSBP3-205ENST00000417664 BRD1O95696 1058 aa19.94■□□□□ 0.78
SSBP3-205ENST00000417664 GNAT2P19087 354 aa19.94■□□□□ 0.78
SSBP3-205ENST00000417664 TOB2Q14106 344 aaPredicted RBP19.94■□□□□ 0.78
SSBP3-205ENST00000417664 ALX1Q15699 326 aa19.94■□□□□ 0.78
SSBP3-205ENST00000417664 FBXL16Q8N461 479 aa19.94■□□□□ 0.78
SSBP3-205ENST00000417664 CCDC24Q8N4L8 307 aa19.94■□□□□ 0.78
SSBP3-205ENST00000417664 RPGRQ92834 1020 aaKnown RBP19.94■□□□□ 0.78
SSBP3-205ENST00000417664 SMC3Q9UQE7 1217 aa19.94■□□□□ 0.78
SSBP3-205ENST00000417664 LEMD3Q9Y2U8 911 aa19.94■□□□□ 0.78
SSBP3-205ENST00000417664 GYG1P46976 350 aa19.93■□□□□ 0.78
SSBP3-205ENST00000417664 ME3Q16798 604 aa19.93■□□□□ 0.78
SSBP3-205ENST00000417664 MAGEB6Q8N7X4 407 aa19.93■□□□□ 0.78
SSBP3-205ENST00000417664 LRP2BPQ9P2M1 347 aa19.93■□□□□ 0.78
SSBP3-205ENST00000417664 TPCN1Q9ULQ1 816 aa19.93■□□□□ 0.78
SSBP3-205ENST00000417664 POLRMTO00411 1230 aaKnown RBP19.92■□□□□ 0.78
SSBP3-205ENST00000417664 BAG4O95429 457 aaKnown RBP19.92■□□□□ 0.78
SSBP3-205ENST00000417664 STOX1Q6ZVD7 989 aa19.92■□□□□ 0.78
SSBP3-205ENST00000417664 CHMP4CQ96CF2 233 aa19.92■□□□□ 0.78
SSBP3-205ENST00000417664 RBM17Q96I25 401 aaKnown RBP19.92■□□□□ 0.78
SSBP3-205ENST00000417664 STRBPQ96SI9 672 aaKnown RBP19.92■□□□□ 0.78
SSBP3-205ENST00000417664 AGXT2Q9BYV1 514 aa19.92■□□□□ 0.78
SSBP3-205ENST00000417664 MYO5AQ9Y4I1 1855 aaKnown RBP19.92■□□□□ 0.78
SSBP3-205ENST00000417664 WDR33Q9C0J8 1336 aaKnown RBP19.92■□□□□ 0.78
SSBP3-205ENST00000417664 KLRG2A4D1S0 409 aaPredicted RBP19.91■□□□□ 0.78
SSBP3-205ENST00000417664 ZNF213O14771 459 aa19.91■□□□□ 0.78
SSBP3-205ENST00000417664 HIBADHP31937 336 aaKnown RBP19.91■□□□□ 0.78
SSBP3-205ENST00000417664 EXOSC10Q01780 885 aaKnown RBP19.91■□□□□ 0.78
SSBP3-205ENST00000417664 SKOR2Q2VWA4 1001 aaPredicted RBP19.91■□□□□ 0.78
SSBP3-205ENST00000417664 ZDHHC9Q9Y397 364 aa19.91■□□□□ 0.78
SSBP3-205ENST00000417664 PNPLA7Q6ZV29 1317 aa19.91■□□□□ 0.78
SSBP3-205ENST00000417664 LARGE1O95461 756 aa19.91■□□□□ 0.78
SSBP3-205ENST00000417664 HOXA10P31260 410 aaPredicted RBP19.91■□□□□ 0.78
SSBP3-205ENST00000417664 PKP1Q13835 747 aa19.91■□□□□ 0.78
SSBP3-205ENST00000417664 TMC4Q7Z404 712 aa19.91■□□□□ 0.78
SSBP3-205ENST00000417664 CCDC83Q8IWF9 413 aa19.91■□□□□ 0.78
SSBP3-205ENST00000417664 XDHP47989 1333 aa19.9■□□□□ 0.78
SSBP3-205ENST00000417664 WDR19Q8NEZ3 1342 aa19.9■□□□□ 0.78
SSBP3-205ENST00000417664 PATL2C9JE40 543 aaKnown RBP19.9■□□□□ 0.78
SSBP3-205ENST00000417664 BBOX1O75936 387 aa19.9■□□□□ 0.78
SSBP3-205ENST00000417664 Q6ZUG5 572 aa19.9■□□□□ 0.78
SSBP3-205ENST00000417664 C15orf52Q6ZUT6 534 aaKnown RBP19.9■□□□□ 0.78
SSBP3-205ENST00000417664 CRAMP1Q96RY5 1269 aa19.9■□□□□ 0.78
SSBP3-205ENST00000417664 FGD1P98174 961 aa19.89■□□□□ 0.77
SSBP3-205ENST00000417664 DDR1Q08345 913 aa19.89■□□□□ 0.77
SSBP3-205ENST00000417664 ZNF827Q17R98 1081 aa19.89■□□□□ 0.77
SSBP3-205ENST00000417664 TTLL5Q6EMB2 1281 aa19.89■□□□□ 0.77
SSBP3-205ENST00000417664 LARP6Q9BRS8 491 aaKnown RBP19.89■□□□□ 0.77
SSBP3-205ENST00000417664 NCOA7Q8NI08 942 aa19.88■□□□□ 0.77
SSBP3-205ENST00000417664 ANKIB1Q9P2G1 1089 aa19.88■□□□□ 0.77
SSBP3-205ENST00000417664 LAMA4Q16363 1823 aa19.88■□□□□ 0.77
SSBP3-205ENST00000417664 TRAK2O60296 914 aa19.87■□□□□ 0.77
SSBP3-205ENST00000417664 COL9A3Q14050 684 aaPredicted RBP19.87■□□□□ 0.77
SSBP3-205ENST00000417664 GSE1Q14687 1217 aa19.87■□□□□ 0.77
SSBP3-205ENST00000417664 COL23A1Q86Y22 540 aaPredicted RBP19.87■□□□□ 0.77
SSBP3-205ENST00000417664 TCEANC2Q96MN5 208 aa19.87■□□□□ 0.77
SSBP3-205ENST00000417664 NACAP1Q9BZK3 213 aa19.87■□□□□ 0.77
SSBP3-205ENST00000417664 IRS2Q9Y4H2 1338 aa19.87■□□□□ 0.77
SSBP3-205ENST00000417664 TNS1Q9HBL0 1735 aaKnown RBP19.87■□□□□ 0.77
SSBP3-205ENST00000417664 MBD4O95243 580 aa19.87■□□□□ 0.77
SSBP3-205ENST00000417664 APPP05067 770 aa19.87■□□□□ 0.77
SSBP3-205ENST00000417664 PDCP20941 246 aa19.87■□□□□ 0.77
SSBP3-205ENST00000417664 TRDNQ13061 729 aa19.87■□□□□ 0.77
SSBP3-205ENST00000417664 BRIP1Q9BX63 1249 aa19.87■□□□□ 0.77
SSBP3-205ENST00000417664 ABCF2Q9UG63 623 aa19.87■□□□□ 0.77
SSBP3-205ENST00000417664 COL1A1P02452 1464 aaPredicted RBP19.86■□□□□ 0.77
SSBP3-205ENST00000417664 GJB2P29033 226 aa19.86■□□□□ 0.77
SSBP3-205ENST00000417664 MCM5P33992 734 aa19.86■□□□□ 0.77
SSBP3-205ENST00000417664 ST3GAL1Q11201 340 aa19.86■□□□□ 0.77
SSBP3-205ENST00000417664 RALYLQ86SE5 291 aaKnown RBP19.86■□□□□ 0.77
SSBP3-205ENST00000417664 GTF3C6Q969F1 213 aa19.86■□□□□ 0.77
SSBP3-205ENST00000417664 RAI14Q9P0K7 980 aa19.86■□□□□ 0.77
SSBP3-205ENST00000417664 WTIPA6NIX2 430 aaPredicted RBP19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms