RNA–Protein interactions for RNA: ENST00000417495.7

SP140-204, Transcript of SP140 nuclear body protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP140, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-204ENST00000417495 TINF2Q9BSI4 451 aa10.42□□□□□ -0.74
SP140-204ENST00000417495 PPFIA2O75334 1257 aa10.41□□□□□ -0.74
SP140-204ENST00000417495 MCTP2Q6DN12 878 aa10.41□□□□□ -0.74
SP140-204ENST00000417495 TSPYL6Q8N831 410 aa10.41□□□□□ -0.74
SP140-204ENST00000417495 UPF1Q92900 1129 aaKnown RBP eCLIP10.41□□□□□ -0.74
SP140-204ENST00000417495 PDZRN3Q9UPQ7 1066 aa10.41□□□□□ -0.74
SP140-204ENST00000417495 FAN1Q9Y2M0 1017 aa10.41□□□□□ -0.74
SP140-204ENST00000417495 UBR2Q8IWV8 1755 aa10.41□□□□□ -0.74
SP140-204ENST00000417495 SKILP12757 684 aa10.41□□□□□ -0.74
SP140-204ENST00000417495 ATF3P18847 181 aa10.41□□□□□ -0.74
SP140-204ENST00000417495 DSG3P32926 999 aa10.41□□□□□ -0.74
SP140-204ENST00000417495 ADCY2Q08462 1091 aa10.41□□□□□ -0.74
SP140-204ENST00000417495 CCDC30Q5VVM6 783 aa10.41□□□□□ -0.74
SP140-204ENST00000417495 ZCRB1Q8TBF4 217 aaKnown RBP10.41□□□□□ -0.74
SP140-204ENST00000417495 IRAK4Q9NWZ3 460 aa10.41□□□□□ -0.74
SP140-204ENST00000417495 SPATA31A3Q5VYP0 1347 aa10.41□□□□□ -0.74
SP140-204ENST00000417495 TLDC2A0PJX2 215 aa10.4□□□□□ -0.74
SP140-204ENST00000417495 GYS2P54840 703 aa10.4□□□□□ -0.74
SP140-204ENST00000417495 TRAF1Q13077 416 aa10.4□□□□□ -0.74
SP140-204ENST00000417495 TTC31Q49AM3 519 aaPredicted RBP10.4□□□□□ -0.74
SP140-204ENST00000417495 ITPRIPQ8IWB1 547 aa10.4□□□□□ -0.74
SP140-204ENST00000417495 STAG1Q8WVM7 1258 aa10.4□□□□□ -0.74
SP140-204ENST00000417495 SLKQ9H2G2 1235 aaPredicted RBP10.4□□□□□ -0.74
SP140-204ENST00000417495 SYNPO2Q9UMS6 1093 aa10.4□□□□□ -0.74
SP140-204ENST00000417495 LRP6O75581 1613 aa10.4□□□□□ -0.74
SP140-204ENST00000417495 SOS2Q07890 1332 aaPredicted RBP10.4□□□□□ -0.74
SP140-204ENST00000417495 CCDC194A0A1B0GVG4 234 aa10.4□□□□□ -0.74
SP140-204ENST00000417495 PPP1R3GB7ZBB8 358 aa10.4□□□□□ -0.74
SP140-204ENST00000417495 CTIFO43310 598 aaKnown RBP10.4□□□□□ -0.74
SP140-204ENST00000417495 ANKRD44Q8N8A2 993 aa10.4□□□□□ -0.74
SP140-204ENST00000417495 FRMD4BQ9Y2L6 1034 aa10.4□□□□□ -0.74
SP140-204ENST00000417495 ZRANB2O95218 330 aaKnown RBP eCLIP10.4□□□□□ -0.75
SP140-204ENST00000417495 FAM163BP0C2L3 166 aa10.4□□□□□ -0.75
SP140-204ENST00000417495 PTPROQ16827 1216 aa10.4□□□□□ -0.75
SP140-204ENST00000417495 SDE2Q6IQ49 451 aa10.4□□□□□ -0.75
SP140-204ENST00000417495 SNRNP27Q8WVK2 155 aaKnown RBP10.4□□□□□ -0.75
SP140-204ENST00000417495 CHCHD3Q9NX63 227 aaKnown RBP10.4□□□□□ -0.75
SP140-204ENST00000417495 PRKAG2Q9UGJ0 569 aa10.4□□□□□ -0.75
SP140-204ENST00000417495 KAT6BQ8WYB5 2073 aa10.39□□□□□ -0.75
SP140-204ENST00000417495 KDM4FA0A1W2PPD8 638 aa10.39□□□□□ -0.75
SP140-204ENST00000417495 SART3Q15020 963 aaKnown RBP10.39□□□□□ -0.75
SP140-204ENST00000417495 TMEM259Q4ZIN3 620 aa10.39□□□□□ -0.75
SP140-204ENST00000417495 ATG3Q9NT62 314 aa10.39□□□□□ -0.75
SP140-204ENST00000417495 CHMP5Q9NZZ3 219 aa10.39□□□□□ -0.75
SP140-204ENST00000417495 TSPYL4Q9UJ04 414 aa10.39□□□□□ -0.75
SP140-204ENST00000417495 TNNQ9UQP3 1299 aa10.39□□□□□ -0.75
SP140-204ENST00000417495 KINO60870 393 aaKnown RBP10.39□□□□□ -0.75
SP140-204ENST00000417495 RABEP1Q15276 862 aa10.39□□□□□ -0.75
SP140-204ENST00000417495 SLFNL1Q499Z3 407 aa10.39□□□□□ -0.75
SP140-204ENST00000417495 KRBA2Q6ZNG9 492 aa10.39□□□□□ -0.75
SP140-204ENST00000417495 NT5DC4Q86YG4 428 aa10.39□□□□□ -0.75
SP140-204ENST00000417495 RPUSD2Q8IZ73 545 aaKnown RBP10.39□□□□□ -0.75
SP140-204ENST00000417495 DCTPP1Q9H773 170 aa10.39□□□□□ -0.75
SP140-204ENST00000417495 DIAPH3Q9NSV4 1193 aa10.39□□□□□ -0.75
SP140-204ENST00000417495 MRPL42Q9Y6G3 142 aaKnown RBP10.39□□□□□ -0.75
SP140-204ENST00000417495 WNK3Q9BYP7 1800 aa10.39□□□□□ -0.75
SP140-204ENST00000417495 CICQ96RK0 1608 aaPredicted RBP10.38□□□□□ -0.75
SP140-204ENST00000417495 ERBB3P21860 1342 aa10.38□□□□□ -0.75
SP140-204ENST00000417495 GLI3P10071 1580 aa10.38□□□□□ -0.75
SP140-204ENST00000417495 FAM83GA6ND36 823 aa10.38□□□□□ -0.75
SP140-204ENST00000417495 ZNF211Q13398 564 aaPredicted RBP10.38□□□□□ -0.75
SP140-204ENST00000417495 CRTC2Q53ET0 693 aaPredicted RBP10.38□□□□□ -0.75
SP140-204ENST00000417495 CCDC181Q5TID7 509 aa10.38□□□□□ -0.75
SP140-204ENST00000417495 AP1ARQ63HQ0 302 aa10.38□□□□□ -0.75
SP140-204ENST00000417495 C10orf67Q8IYJ2 551 aa10.38□□□□□ -0.75
SP140-204ENST00000417495 IL17REQ8NFR9 667 aa10.38□□□□□ -0.75
SP140-204ENST00000417495 CABLES1Q8TDN4 633 aa10.38□□□□□ -0.75
SP140-204ENST00000417495 CHPF2Q9P2E5 772 aa10.38□□□□□ -0.75
SP140-204ENST00000417495 ZNF232Q9UNY5 417 aa10.38□□□□□ -0.75
SP140-204ENST00000417495 TMA7Q9Y2S6 64 aaKnown RBP10.38□□□□□ -0.75
SP140-204ENST00000417495 SHANK3Q9BYB0 1731 aa10.38□□□□□ -0.75
SP140-204ENST00000417495 NAP1L1P55209 391 aaKnown RBP10.38□□□□□ -0.75
SP140-204ENST00000417495 RHBDL3P58872 404 aa10.38□□□□□ -0.75
SP140-204ENST00000417495 FOXD4Q12950 439 aaPredicted RBP10.38□□□□□ -0.75
SP140-204ENST00000417495 MTMR3Q13615 1198 aa10.38□□□□□ -0.75
SP140-204ENST00000417495 BMP2KLQ5H9B9 411 aa10.38□□□□□ -0.75
SP140-204ENST00000417495 WWC2Q6AWC2 1192 aa10.38□□□□□ -0.75
SP140-204ENST00000417495 TRIM74Q86UV6 250 aa10.38□□□□□ -0.75
SP140-204ENST00000417495 TRIM73Q86UV7 250 aa10.38□□□□□ -0.75
SP140-204ENST00000417495 DZIP3Q86Y13 1208 aaKnown RBP10.38□□□□□ -0.75
SP140-204ENST00000417495 TXLNBQ8N3L3 684 aa10.38□□□□□ -0.75
SP140-204ENST00000417495 TSC1Q92574 1164 aa10.38□□□□□ -0.75
SP140-204ENST00000417495 ZNF396Q96N95 335 aaPredicted RBP10.38□□□□□ -0.75
SP140-204ENST00000417495 THUMPD2Q9BTF0 503 aaKnown RBP10.38□□□□□ -0.75
SP140-204ENST00000417495 FAM53CQ9NYF3 392 aa10.38□□□□□ -0.75
SP140-204ENST00000417495 SUN2Q9UH99 717 aa10.38□□□□□ -0.75
SP140-204ENST00000417495 COL15A1P39059 1388 aa10.38□□□□□ -0.75
SP140-204ENST00000417495 hCG_2014768A0A024R1R8 64 aa10.37□□□□□ -0.75
SP140-204ENST00000417495 ORAI2Q96SN7 254 aa10.37□□□□□ -0.75
SP140-204ENST00000417495 COL14A1Q05707 1796 aaKnown RBP10.37□□□□□ -0.75
SP140-204ENST00000417495 SYNRGQ9UMZ2 1314 aa10.37□□□□□ -0.75
SP140-204ENST00000417495 VAMP1P23763 118 aa10.37□□□□□ -0.75
SP140-204ENST00000417495 NEXNQ0ZGT2 675 aa10.37□□□□□ -0.75
SP140-204ENST00000417495 PES1O00541 588 aaKnown RBP10.36□□□□□ -0.75
SP140-204ENST00000417495 MCM10Q7L590 875 aa10.36□□□□□ -0.75
SP140-204ENST00000417495 METTL16Q86W50 562 aaKnown RBP10.36□□□□□ -0.75
SP140-204ENST00000417495 CHD1LQ86WJ1 897 aa10.36□□□□□ -0.75
SP140-204ENST00000417495 ARPC5LQ9BPX5 153 aa10.36□□□□□ -0.75
SP140-204ENST00000417495 ZNF446Q9NWS9 450 aa10.36□□□□□ -0.75
SP140-204ENST00000417495 METTL3Q86U44 580 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms