RNA–Protein interactions for RNA: ENST00000416438.6

LINC00475-202, long intergenic non-protein coding RNA 475, humanhuman

TSL 2 BASIC

Gene LINC00475, Length 2,506 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-202ENST00000416438 PPP4R3BQ5MIZ7 849 aa17.21■□□□□ 0.35
LINC00475-202ENST00000416438 WDR17Q8IZU2 1322 aa17.21■□□□□ 0.34
LINC00475-202ENST00000416438 PCDH11XQ9BZA7 1347 aa17.21■□□□□ 0.34
LINC00475-202ENST00000416438 PCDH11YQ9BZA8 1340 aa17.21■□□□□ 0.34
LINC00475-202ENST00000416438 NDUFA8P51970 172 aa17.2■□□□□ 0.34
LINC00475-202ENST00000416438 LRRC8AQ8IWT6 810 aa17.2■□□□□ 0.34
LINC00475-202ENST00000416438 SDF4Q9BRK5 362 aa17.2■□□□□ 0.34
LINC00475-202ENST00000416438 USP27XA6NNY8 438 aa17.2■□□□□ 0.34
LINC00475-202ENST00000416438 CAVIN2O95810 425 aa17.2■□□□□ 0.34
LINC00475-202ENST00000416438 TPD52L1Q16890 204 aaPredicted RBP17.2■□□□□ 0.34
LINC00475-202ENST00000416438 IMMTQ16891 758 aaKnown RBP17.2■□□□□ 0.34
LINC00475-202ENST00000416438 AOPEPQ8N6M6 819 aa17.2■□□□□ 0.34
LINC00475-202ENST00000416438 NKX2-3Q8TAU0 364 aa17.2■□□□□ 0.34
LINC00475-202ENST00000416438 ERVV-2B6SEH9 535 aa17.19■□□□□ 0.34
LINC00475-202ENST00000416438 ANTXR2P58335 489 aa17.19■□□□□ 0.34
LINC00475-202ENST00000416438 TAF7LQ5H9L4 462 aa17.19■□□□□ 0.34
LINC00475-202ENST00000416438 SARM1Q6SZW1 724 aa17.19■□□□□ 0.34
LINC00475-202ENST00000416438 FMR1NBQ8N0W7 255 aaPredicted RBP17.19■□□□□ 0.34
LINC00475-202ENST00000416438 C8orf76Q96K31 380 aa17.19■□□□□ 0.34
LINC00475-202ENST00000416438 ISCA1Q9BUE6 129 aa17.19■□□□□ 0.34
LINC00475-202ENST00000416438 ATG3Q9NT62 314 aa17.19■□□□□ 0.34
LINC00475-202ENST00000416438 HPS5Q9UPZ3 1129 aa17.19■□□□□ 0.34
LINC00475-202ENST00000416438 GOLGA8BA8MQT2 603 aa17.19■□□□□ 0.34
LINC00475-202ENST00000416438 CBX1P83916 185 aa17.19■□□□□ 0.34
LINC00475-202ENST00000416438 TCIRG1Q13488 830 aa17.19■□□□□ 0.34
LINC00475-202ENST00000416438 NAA30Q147X3 362 aaPredicted RBP17.19■□□□□ 0.34
LINC00475-202ENST00000416438 SF3A1Q15459 793 aaKnown RBP17.19■□□□□ 0.34
LINC00475-202ENST00000416438 LINC00301Q8NCQ3 95 aa17.19■□□□□ 0.34
LINC00475-202ENST00000416438 MRPS27Q92552 414 aaKnown RBP17.19■□□□□ 0.34
LINC00475-202ENST00000416438 ANO10Q9NW15 660 aa17.19■□□□□ 0.34
LINC00475-202ENST00000416438 ORC3Q9UBD5 711 aaPredicted RBP17.19■□□□□ 0.34
LINC00475-202ENST00000416438 STK38Q15208 465 aa17.18■□□□□ 0.34
LINC00475-202ENST00000416438 ATP2B3Q16720 1220 aa17.18■□□□□ 0.34
LINC00475-202ENST00000416438 ZNF592Q92610 1267 aa17.18■□□□□ 0.34
LINC00475-202ENST00000416438 STRN4Q9NRL3 753 aa17.18■□□□□ 0.34
LINC00475-202ENST00000416438 RTEL1Q9NZ71 1219 aa17.18■□□□□ 0.34
LINC00475-202ENST00000416438 KIF28PB7ZC32 967 aa17.18■□□□□ 0.34
LINC00475-202ENST00000416438 CDC25BP30305 580 aa17.18■□□□□ 0.34
LINC00475-202ENST00000416438 EVCP57679 992 aa17.18■□□□□ 0.34
LINC00475-202ENST00000416438 ATL3Q6DD88 541 aa17.18■□□□□ 0.34
LINC00475-202ENST00000416438 ADALQ6DHV7 355 aa17.18■□□□□ 0.34
LINC00475-202ENST00000416438 MB21D2Q8IYB1 491 aaPredicted RBP17.18■□□□□ 0.34
LINC00475-202ENST00000416438 CTNNA3Q9UI47 895 aa17.18■□□□□ 0.34
LINC00475-202ENST00000416438 LAMB4A4D0S4 1761 aa17.18■□□□□ 0.34
LINC00475-202ENST00000416438 CTIFO43310 598 aaKnown RBP17.17■□□□□ 0.34
LINC00475-202ENST00000416438 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.17■□□□□ 0.34
LINC00475-202ENST00000416438 MRFAP1L1Q96HT8 127 aa17.17■□□□□ 0.34
LINC00475-202ENST00000416438 AIFM3Q96NN9 605 aa17.17■□□□□ 0.34
LINC00475-202ENST00000416438 PLEKHG2Q9H7P9 1386 aa17.17■□□□□ 0.34
LINC00475-202ENST00000416438 BIN1O00499 593 aa17.17■□□□□ 0.34
LINC00475-202ENST00000416438 GPAA1O43292 621 aa17.17■□□□□ 0.34
LINC00475-202ENST00000416438 RXRAP19793 462 aa17.17■□□□□ 0.34
LINC00475-202ENST00000416438 PDCL2Q8N4E4 241 aa17.17■□□□□ 0.34
LINC00475-202ENST00000416438 AKAP2Q9Y2D5 859 aa17.17■□□□□ 0.34
LINC00475-202ENST00000416438 SPDYE4A6NLX3 237 aa17.16■□□□□ 0.34
LINC00475-202ENST00000416438 ZNF213O14771 459 aa17.16■□□□□ 0.34
LINC00475-202ENST00000416438 CPLX1O14810 134 aa17.16■□□□□ 0.34
LINC00475-202ENST00000416438 GPTP24298 496 aa17.16■□□□□ 0.34
LINC00475-202ENST00000416438 DPCR1Q3MIW9 517 aa17.16■□□□□ 0.34
LINC00475-202ENST00000416438 FBXO18Q8NFZ0 1043 aa17.16■□□□□ 0.34
LINC00475-202ENST00000416438 APPBP2Q92624 585 aa17.16■□□□□ 0.34
LINC00475-202ENST00000416438 TRMT1Q9NXH9 659 aaKnown RBP17.16■□□□□ 0.34
LINC00475-202ENST00000416438 CCDC69A6NI79 296 aa17.16■□□□□ 0.34
LINC00475-202ENST00000416438 SKILP12757 684 aa17.16■□□□□ 0.34
LINC00475-202ENST00000416438 IFIT5Q13325 482 aaKnown RBP17.16■□□□□ 0.34
LINC00475-202ENST00000416438 RALYLQ86SE5 291 aaKnown RBP17.16■□□□□ 0.34
LINC00475-202ENST00000416438 DNAJC10Q8IXB1 793 aa17.16■□□□□ 0.34
LINC00475-202ENST00000416438 CEP57L1Q8IYX8 460 aa17.16■□□□□ 0.34
LINC00475-202ENST00000416438 NCOA7Q8NI08 942 aa17.16■□□□□ 0.34
LINC00475-202ENST00000416438 TJP1Q07157 1748 aa17.16■□□□□ 0.34
LINC00475-202ENST00000416438 PARP4Q9UKK3 1724 aaKnown RBP17.15■□□□□ 0.34
LINC00475-202ENST00000416438 IL2RBP14784 551 aa17.15■□□□□ 0.34
LINC00475-202ENST00000416438 MCAMP43121 646 aa17.15■□□□□ 0.34
LINC00475-202ENST00000416438 MYSM1Q5VVJ2 828 aa17.15■□□□□ 0.34
LINC00475-202ENST00000416438 ISM2Q6H9L7 571 aa17.15■□□□□ 0.34
LINC00475-202ENST00000416438 ANKRD7Q92527 254 aa17.15■□□□□ 0.34
LINC00475-202ENST00000416438 KCPQ6ZWJ8 1503 aa17.15■□□□□ 0.34
LINC00475-202ENST00000416438 COL5A2P05997 1499 aaPredicted RBP17.15■□□□□ 0.34
LINC00475-202ENST00000416438 SPTLC2O15270 562 aa17.15■□□□□ 0.34
LINC00475-202ENST00000416438 U2AF2P26368 475 aaKnown RBP eCLIP17.15■□□□□ 0.34
LINC00475-202ENST00000416438 FBXL16Q8N461 479 aa17.15■□□□□ 0.34
LINC00475-202ENST00000416438 ASAP1Q9ULH1 1129 aa17.15■□□□□ 0.34
LINC00475-202ENST00000416438 ZFYP08048 801 aaPredicted RBP17.14■□□□□ 0.33
LINC00475-202ENST00000416438 MARCKSP29966 332 aaPredicted RBP17.14■□□□□ 0.33
LINC00475-202ENST00000416438 NCBP1Q09161 790 aaKnown RBP17.14■□□□□ 0.33
LINC00475-202ENST00000416438 METTL24Q5JXM2 366 aa17.14■□□□□ 0.33
LINC00475-202ENST00000416438 PKNOX2Q96KN3 472 aa17.14■□□□□ 0.33
LINC00475-202ENST00000416438 KIAA1468Q9P260 1216 aa17.14■□□□□ 0.33
LINC00475-202ENST00000416438 SMTNL1A8MU46 457 aa17.14■□□□□ 0.33
LINC00475-202ENST00000416438 NKX1-1Q15270 411 aaPredicted RBP17.14■□□□□ 0.33
LINC00475-202ENST00000416438 HLFQ16534 295 aa17.14■□□□□ 0.33
LINC00475-202ENST00000416438 LRRFIP1Q32MZ4 808 aaKnown RBP17.14■□□□□ 0.33
LINC00475-202ENST00000416438 TICAM2Q86XR7 235 aa17.14■□□□□ 0.33
LINC00475-202ENST00000416438 NBPF3Q9H094 633 aa17.14■□□□□ 0.33
LINC00475-202ENST00000416438 SENP2Q9HC62 589 aa17.14■□□□□ 0.33
LINC00475-202ENST00000416438 XIRP1Q702N8 1843 aaKnown RBP17.14■□□□□ 0.33
LINC00475-202ENST00000416438 CCZ1BP86790 482 aa17.13■□□□□ 0.33
LINC00475-202ENST00000416438 CCZ1P86791 482 aaPredicted RBP17.13■□□□□ 0.33
LINC00475-202ENST00000416438 CEP135Q66GS9 1140 aa17.13■□□□□ 0.33
LINC00475-202ENST00000416438 LDHAL6AQ6ZMR3 332 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms