RNA–Protein interactions for RNA: ENST00000413553.1

SIK3-202, Transcript of SIK family kinase 3, humanhuman

TSL 5

Gene SIK3, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-202ENST00000413553 CAPN2P17655 700 aa10.36□□□□□ -0.75
SIK3-202ENST00000413553 ADD1P35611 737 aaKnown RBP10.36□□□□□ -0.75
SIK3-202ENST00000413553 PLA2G4AP47712 749 aa10.36□□□□□ -0.75
SIK3-202ENST00000413553 TPM4P67936 248 aa10.36□□□□□ -0.75
SIK3-202ENST00000413553 CCT2P78371 535 aaKnown RBP10.36□□□□□ -0.75
SIK3-202ENST00000413553 AIMP1Q12904 312 aaKnown RBP10.36□□□□□ -0.75
SIK3-202ENST00000413553 DPCR1Q3MIW9 517 aa10.36□□□□□ -0.75
SIK3-202ENST00000413553 ZNF496Q96IT1 587 aaPredicted RBP10.36□□□□□ -0.75
SIK3-202ENST00000413553 KCND1Q9NSA2 647 aa10.36□□□□□ -0.75
SIK3-202ENST00000413553 NDUFB9Q9Y6M9 179 aa10.36□□□□□ -0.75
SIK3-202ENST00000413553 PSDA5PKW4 1024 aaPredicted RBP10.35□□□□□ -0.75
SIK3-202ENST00000413553 PTCD1O75127 700 aaKnown RBP10.35□□□□□ -0.75
SIK3-202ENST00000413553 URI1O94763 535 aaPredicted RBP10.35□□□□□ -0.75
SIK3-202ENST00000413553 MYL6BP14649 208 aa10.35□□□□□ -0.75
SIK3-202ENST00000413553 ENGASEQ8NFI3 743 aa10.35□□□□□ -0.75
SIK3-202ENST00000413553 KLHDC4Q8TBB5 520 aa10.35□□□□□ -0.75
SIK3-202ENST00000413553 CERKQ8TCT0 537 aa10.35□□□□□ -0.75
SIK3-202ENST00000413553 MRPS27Q92552 414 aaKnown RBP10.35□□□□□ -0.75
SIK3-202ENST00000413553 BICC1Q9H694 974 aaKnown RBP10.35□□□□□ -0.75
SIK3-202ENST00000413553 SNRKQ9NRH2 765 aa10.35□□□□□ -0.75
SIK3-202ENST00000413553 HDAC5Q9UQL6 1122 aa10.35□□□□□ -0.75
SIK3-202ENST00000413553 ABCA3Q99758 1704 aa10.35□□□□□ -0.75
SIK3-202ENST00000413553 SEC31AO94979 1220 aaKnown RBP10.35□□□□□ -0.75
SIK3-202ENST00000413553 SF3A1Q15459 793 aaKnown RBP10.35□□□□□ -0.75
SIK3-202ENST00000413553 SUCLG2Q96I99 432 aa10.35□□□□□ -0.75
SIK3-202ENST00000413553 TRIM34Q9BYJ4 488 aa10.35□□□□□ -0.75
SIK3-202ENST00000413553 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.35□□□□□ -0.75
SIK3-202ENST00000413553 ALDH1L1O75891 902 aa10.35□□□□□ -0.75
SIK3-202ENST00000413553 APOBRQ0VD83 1088 aa10.35□□□□□ -0.75
SIK3-202ENST00000413553 TSGA10IPQ3SY00 556 aa10.35□□□□□ -0.75
SIK3-202ENST00000413553 CCDC93Q567U6 631 aa10.35□□□□□ -0.75
SIK3-202ENST00000413553 NAA16Q6N069 864 aaPredicted RBP10.35□□□□□ -0.75
SIK3-202ENST00000413553 FAM177A1Q8N128 213 aaPredicted RBP10.35□□□□□ -0.75
SIK3-202ENST00000413553 NSUN7Q8NE18 718 aaKnown RBP10.35□□□□□ -0.75
SIK3-202ENST00000413553 SEC62Q99442 399 aaKnown RBP10.35□□□□□ -0.75
SIK3-202ENST00000413553 TMOD3Q9NYL9 352 aa10.35□□□□□ -0.75
SIK3-202ENST00000413553 ERVV-2B6SEH9 535 aa10.34□□□□□ -0.75
SIK3-202ENST00000413553 CYP21A2P08686 494 aa10.34□□□□□ -0.75
SIK3-202ENST00000413553 SNRPA1P09661 255 aaKnown RBP10.34□□□□□ -0.75
SIK3-202ENST00000413553 PLCD3Q8N3E9 789 aa10.34□□□□□ -0.75
SIK3-202ENST00000413553 SMARCC2Q8TAQ2 1214 aa10.34□□□□□ -0.75
SIK3-202ENST00000413553 NCOA5Q9HCD5 579 aaKnown RBP10.34□□□□□ -0.75
SIK3-202ENST00000413553 ORC3Q9UBD5 711 aaPredicted RBP10.34□□□□□ -0.75
SIK3-202ENST00000413553 LAMA4Q16363 1823 aa10.34□□□□□ -0.75
SIK3-202ENST00000413553 GRM8O00222 908 aa10.34□□□□□ -0.75
SIK3-202ENST00000413553 TULP2O00295 520 aa10.34□□□□□ -0.75
SIK3-202ENST00000413553 CHGBP05060 677 aa10.34□□□□□ -0.75
SIK3-202ENST00000413553 LMOD1P29536 600 aaPredicted RBP10.34□□□□□ -0.75
SIK3-202ENST00000413553 ETF1P62495 437 aaKnown RBP10.34□□□□□ -0.75
SIK3-202ENST00000413553 RAD51AP2Q09MP3 1159 aa10.34□□□□□ -0.75
SIK3-202ENST00000413553 GNL2Q13823 731 aaKnown RBP10.33□□□□□ -0.76
SIK3-202ENST00000413553 PROSER3Q2NL68 480 aa10.33□□□□□ -0.76
SIK3-202ENST00000413553 ISM2Q6H9L7 571 aa10.33□□□□□ -0.76
SIK3-202ENST00000413553 CARD6Q9BX69 1037 aa10.33□□□□□ -0.76
SIK3-202ENST00000413553 PCDHA7Q9UN72 937 aa10.33□□□□□ -0.76
SIK3-202ENST00000413553 U3KPZ7 1027 aaPredicted RBP10.33□□□□□ -0.76
SIK3-202ENST00000413553 PLEKHG2Q9H7P9 1386 aa10.33□□□□□ -0.76
SIK3-202ENST00000413553 PFKFB2O60825 505 aa10.33□□□□□ -0.76
SIK3-202ENST00000413553 NDUFA8P51970 172 aa10.33□□□□□ -0.76
SIK3-202ENST00000413553 STK38Q15208 465 aa10.33□□□□□ -0.76
SIK3-202ENST00000413553 MEX3CQ5U5Q3 659 aaKnown RBP10.33□□□□□ -0.76
SIK3-202ENST00000413553 KSR2Q6VAB6 950 aa10.33□□□□□ -0.76
SIK3-202ENST00000413553 FMR1NBQ8N0W7 255 aaPredicted RBP10.33□□□□□ -0.76
SIK3-202ENST00000413553 LLPHQ9BRT6 129 aaKnown RBP10.33□□□□□ -0.76
SIK3-202ENST00000413553 KIAA1468Q9P260 1216 aa10.33□□□□□ -0.76
SIK3-202ENST00000413553 COL15A1P39059 1388 aa10.33□□□□□ -0.76
SIK3-202ENST00000413553 JCADQ9P266 1359 aa10.33□□□□□ -0.76
SIK3-202ENST00000413553 CCP110O43303 1012 aa10.32□□□□□ -0.76
SIK3-202ENST00000413553 DDX58O95786 925 aaKnown RBP10.32□□□□□ -0.76
SIK3-202ENST00000413553 PIP4K2AP48426 406 aaPredicted RBP10.32□□□□□ -0.76
SIK3-202ENST00000413553 DDB1Q16531 1140 aa10.32□□□□□ -0.76
SIK3-202ENST00000413553 USPL1Q5W0Q7 1092 aa10.32□□□□□ -0.76
SIK3-202ENST00000413553 IPO4Q8TEX9 1081 aaKnown RBP10.32□□□□□ -0.76
SIK3-202ENST00000413553 CCDC34Q96HJ3 373 aa10.32□□□□□ -0.76
SIK3-202ENST00000413553 EPC1Q9H2F5 836 aa10.32□□□□□ -0.76
SIK3-202ENST00000413553 KDM3BQ7LBC6 1761 aa10.32□□□□□ -0.76
SIK3-202ENST00000413553 PHLPP2Q6ZVD8 1323 aa10.32□□□□□ -0.76
SIK3-202ENST00000413553 ZRANB2O95218 330 aaKnown RBP eCLIP10.32□□□□□ -0.76
SIK3-202ENST00000413553 CTDNEP1O95476 244 aa10.32□□□□□ -0.76
SIK3-202ENST00000413553 OAS2P29728 719 aaKnown RBP10.32□□□□□ -0.76
SIK3-202ENST00000413553 EVCP57679 992 aa10.32□□□□□ -0.76
SIK3-202ENST00000413553 KRBA2Q6ZNG9 492 aa10.32□□□□□ -0.76
SIK3-202ENST00000413553 TXLNBQ8N3L3 684 aa10.32□□□□□ -0.76
SIK3-202ENST00000413553 TSPYL1Q9H0U9 437 aa10.32□□□□□ -0.76
SIK3-202ENST00000413553 COL14A1Q05707 1796 aaKnown RBP10.32□□□□□ -0.76
SIK3-202ENST00000413553 TUBB4AP04350 444 aa10.32□□□□□ -0.76
SIK3-202ENST00000413553 SLC3A2P08195 630 aaKnown RBP10.32□□□□□ -0.76
SIK3-202ENST00000413553 ST5P78524 1137 aa10.32□□□□□ -0.76
SIK3-202ENST00000413553 GPS2Q13227 327 aa10.32□□□□□ -0.76
SIK3-202ENST00000413553 UTP14AQ9BVJ6 771 aaKnown RBP10.32□□□□□ -0.76
SIK3-202ENST00000413553 TMX1Q9H3N1 280 aa10.32□□□□□ -0.76
SIK3-202ENST00000413553 ZCCHC17Q9NP64 241 aaKnown RBP10.32□□□□□ -0.76
SIK3-202ENST00000413553 ZNF330Q9Y3S2 320 aaPredicted RBP10.32□□□□□ -0.76
SIK3-202ENST00000413553 ZNF609O15014 1411 aa10.31□□□□□ -0.76
SIK3-202ENST00000413553 COL16A1Q07092 1604 aaPredicted RBP10.31□□□□□ -0.76
SIK3-202ENST00000413553 PARP4Q9UKK3 1724 aaKnown RBP10.31□□□□□ -0.76
SIK3-202ENST00000413553 FANCCQ00597 558 aa10.31□□□□□ -0.76
SIK3-202ENST00000413553 SLC20A2Q08357 652 aa10.31□□□□□ -0.76
SIK3-202ENST00000413553 NKX1-1Q15270 411 aaPredicted RBP10.31□□□□□ -0.76
SIK3-202ENST00000413553 ATL3Q6DD88 541 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms