RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 C19orf44Q9H6X5 657 aa7.72□□□□□ -1.17
LINC00342-201ENST00000412393 PCMTD2Q9NV79 361 aa7.72□□□□□ -1.17
LINC00342-201ENST00000412393 SLAIN2Q9P270 581 aa7.72□□□□□ -1.17
LINC00342-201ENST00000412393 RPGRIP1LQ68CZ1 1315 aa7.72□□□□□ -1.17
LINC00342-201ENST00000412393 IFT172Q9UG01 1749 aa7.72□□□□□ -1.17
LINC00342-201ENST00000412393 METP08581 1390 aa7.71□□□□□ -1.17
LINC00342-201ENST00000412393 CCDC144AA2RUR9 1427 aa7.71□□□□□ -1.17
LINC00342-201ENST00000412393 ATF3P18847 181 aa7.71□□□□□ -1.18
LINC00342-201ENST00000412393 RAB44Q7Z6P3 723 aaPredicted RBP7.71□□□□□ -1.18
LINC00342-201ENST00000412393 BHMTQ93088 406 aa7.71□□□□□ -1.18
LINC00342-201ENST00000412393 NALCNQ8IZF0 1738 aa7.7□□□□□ -1.18
LINC00342-201ENST00000412393 COBLO75128 1261 aa7.7□□□□□ -1.18
LINC00342-201ENST00000412393 RGS9O75916 674 aaPredicted RBP7.7□□□□□ -1.18
LINC00342-201ENST00000412393 FBXO11Q86XK2 927 aa7.7□□□□□ -1.18
LINC00342-201ENST00000412393 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.7□□□□□ -1.18
LINC00342-201ENST00000412393 WFDC12Q8WWY7 111 aa7.7□□□□□ -1.18
LINC00342-201ENST00000412393 RAB3GAP2Q9H2M9 1393 aa7.7□□□□□ -1.18
LINC00342-201ENST00000412393 RGL3Q3MIN7 710 aa7.69□□□□□ -1.18
LINC00342-201ENST00000412393 PSAPL1Q6NUJ1 521 aa7.69□□□□□ -1.18
LINC00342-201ENST00000412393 IGF2-ASQ6U949 168 aa7.69□□□□□ -1.18
LINC00342-201ENST00000412393 COL16A1Q07092 1604 aaPredicted RBP7.69□□□□□ -1.18
LINC00342-201ENST00000412393 DCCP43146 1447 aa7.69□□□□□ -1.18
LINC00342-201ENST00000412393 SPATA31E1Q6ZUB1 1445 aa7.69□□□□□ -1.18
LINC00342-201ENST00000412393 SFI1A8K8P3 1242 aa7.68□□□□□ -1.18
LINC00342-201ENST00000412393 MSL1Q68DK7 614 aa7.68□□□□□ -1.18
LINC00342-201ENST00000412393 PRR23CQ6ZRP0 262 aa7.68□□□□□ -1.18
LINC00342-201ENST00000412393 TRIM50Q86XT4 487 aa7.68□□□□□ -1.18
LINC00342-201ENST00000412393 FRRS1LQ9P0K9 344 aa7.68□□□□□ -1.18
LINC00342-201ENST00000412393 ADGRL3Q9HAR2 1447 aa7.68□□□□□ -1.18
LINC00342-201ENST00000412393 AHDC1Q5TGY3 1603 aaPredicted RBP7.67□□□□□ -1.18
LINC00342-201ENST00000412393 ARID1BQ8NFD5 2236 aaPredicted RBP7.67□□□□□ -1.18
LINC00342-201ENST00000412393 DMRTC2Q8IXT2 367 aaPredicted RBP7.67□□□□□ -1.18
LINC00342-201ENST00000412393 NUDT8Q8WV74 236 aa7.67□□□□□ -1.18
LINC00342-201ENST00000412393 SUSD3Q96L08 255 aa7.67□□□□□ -1.18
LINC00342-201ENST00000412393 ADGRF5Q8IZF2 1346 aa7.67□□□□□ -1.18
LINC00342-201ENST00000412393 ANKRD30BQ9BXX2 1392 aa7.67□□□□□ -1.18
LINC00342-201ENST00000412393 NHSL1Q5SYE7 1610 aa7.67□□□□□ -1.18
LINC00342-201ENST00000412393 M0R2N6 131 aa7.66□□□□□ -1.18
LINC00342-201ENST00000412393 IRAK1P51617 712 aa7.66□□□□□ -1.18
LINC00342-201ENST00000412393 TNS4Q8IZW8 715 aa7.66□□□□□ -1.18
LINC00342-201ENST00000412393 DCAF11Q8TEB1 546 aa7.66□□□□□ -1.18
LINC00342-201ENST00000412393 PHACTR1Q9C0D0 580 aa7.66□□□□□ -1.18
LINC00342-201ENST00000412393 DNAJB12Q9NXW2 375 aaKnown RBP7.66□□□□□ -1.18
LINC00342-201ENST00000412393 ROBO2Q9HCK4 1378 aa7.66□□□□□ -1.18
LINC00342-201ENST00000412393 JCADQ9P266 1359 aa7.66□□□□□ -1.18
LINC00342-201ENST00000412393 MST1RQ04912 1400 aa7.66□□□□□ -1.18
LINC00342-201ENST00000412393 PTCH1Q13635 1447 aa7.66□□□□□ -1.18
LINC00342-201ENST00000412393 SHPRHQ149N8 1683 aa7.66□□□□□ -1.18
LINC00342-201ENST00000412393 KNDC1Q76NI1 1749 aa7.66□□□□□ -1.18
LINC00342-201ENST00000412393 GSC2O15499 205 aa7.65□□□□□ -1.18
LINC00342-201ENST00000412393 SKIP12755 728 aa7.65□□□□□ -1.18
LINC00342-201ENST00000412393 NOS3P29474 1203 aa7.65□□□□□ -1.18
LINC00342-201ENST00000412393 IREB2P48200 963 aaKnown RBP7.65□□□□□ -1.18
LINC00342-201ENST00000412393 CD97P48960 835 aa7.65□□□□□ -1.18
LINC00342-201ENST00000412393 TBC1D8BQ0IIM8 1120 aa7.65□□□□□ -1.18
LINC00342-201ENST00000412393 IER5Q5VY09 327 aa7.65□□□□□ -1.18
LINC00342-201ENST00000412393 BRINP3Q76B58 766 aa7.65□□□□□ -1.18
LINC00342-201ENST00000412393 PRAG1Q86YV5 1406 aa7.65□□□□□ -1.18
LINC00342-201ENST00000412393 ASXL1Q8IXJ9 1541 aa7.65□□□□□ -1.18
LINC00342-201ENST00000412393 TTC9Q92623 222 aa7.65□□□□□ -1.18
LINC00342-201ENST00000412393 HSH2DQ96JZ2 352 aa7.65□□□□□ -1.18
LINC00342-201ENST00000412393 PNMA5Q96PV4 448 aa7.65□□□□□ -1.18
LINC00342-201ENST00000412393 C11orf16Q9NQ32 467 aa7.65□□□□□ -1.18
LINC00342-201ENST00000412393 LAMC1P11047 1609 aa7.64□□□□□ -1.19
LINC00342-201ENST00000412393 ATP1A2P50993 1020 aa7.64□□□□□ -1.19
LINC00342-201ENST00000412393 NCOA4Q13772 614 aa7.64□□□□□ -1.19
LINC00342-201ENST00000412393 BTLAQ7Z6A9 289 aa7.64□□□□□ -1.19
LINC00342-201ENST00000412393 DZIP1LQ8IYY4 767 aaKnown RBP7.64□□□□□ -1.19
LINC00342-201ENST00000412393 STAG2Q8N3U4 1231 aa7.64□□□□□ -1.19
LINC00342-201ENST00000412393 IGFLR1Q9H665 355 aa7.64□□□□□ -1.19
LINC00342-201ENST00000412393 GDPD2Q9HCC8 539 aa7.64□□□□□ -1.19
LINC00342-201ENST00000412393 STK26Q9P289 416 aa7.64□□□□□ -1.19
LINC00342-201ENST00000412393 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.64□□□□□ -1.19
LINC00342-201ENST00000412393 PIK3C2GO75747 1445 aa7.63□□□□□ -1.19
LINC00342-201ENST00000412393 ABL2P42684 1182 aa7.63□□□□□ -1.19
LINC00342-201ENST00000412393 CCINQ13939 588 aa7.63□□□□□ -1.19
LINC00342-201ENST00000412393 SH3PXD2AQ5TCZ1 1133 aa7.63□□□□□ -1.19
LINC00342-201ENST00000412393 TMEM132EQ6IEE7 984 aa7.63□□□□□ -1.19
LINC00342-201ENST00000412393 GSX2Q9BZM3 304 aa7.63□□□□□ -1.19
LINC00342-201ENST00000412393 RGS17Q9UGC6 210 aaPredicted RBP7.63□□□□□ -1.19
LINC00342-201ENST00000412393 NAGPAQ9UK23 515 aa7.63□□□□□ -1.19
LINC00342-201ENST00000412393 MYOM2P54296 1465 aa7.62□□□□□ -1.19
LINC00342-201ENST00000412393 C1orf167Q5SNV9 1468 aa7.62□□□□□ -1.19
LINC00342-201ENST00000412393 LRPPRCP42704 1394 aaKnown RBP7.62□□□□□ -1.19
LINC00342-201ENST00000412393 SPATA31A6Q5VVP1 1343 aa7.62□□□□□ -1.19
LINC00342-201ENST00000412393 PIK3CDO00329 1044 aa7.62□□□□□ -1.19
LINC00342-201ENST00000412393 MAP3K6O95382 1288 aa7.62□□□□□ -1.19
LINC00342-201ENST00000412393 FSTP19883 344 aa7.62□□□□□ -1.19
LINC00342-201ENST00000412393 TBCELQ5QJ74 424 aa7.62□□□□□ -1.19
LINC00342-201ENST00000412393 WFDC8Q8IUA0 241 aa7.62□□□□□ -1.19
LINC00342-201ENST00000412393 TMEM130Q8N3G9 435 aa7.62□□□□□ -1.19
LINC00342-201ENST00000412393 ZNF280CQ8ND82 737 aa7.62□□□□□ -1.19
LINC00342-201ENST00000412393 C14orf93Q9H972 538 aaKnown RBP7.62□□□□□ -1.19
LINC00342-201ENST00000412393 HCN4Q9Y3Q4 1203 aa7.62□□□□□ -1.19
LINC00342-201ENST00000412393 CDC42BPGQ6DT37 1551 aa7.62□□□□□ -1.19
LINC00342-201ENST00000412393 NRXN1Q9ULB1 1477 aa7.62□□□□□ -1.19
LINC00342-201ENST00000412393 TECPR2O15040 1411 aa7.61□□□□□ -1.19
LINC00342-201ENST00000412393 YTHDC2Q9H6S0 1430 aaKnown RBP7.61□□□□□ -1.19
LINC00342-201ENST00000412393 RGPD8O14715 1765 aaPredicted RBP7.61□□□□□ -1.19
LINC00342-201ENST00000412393 ABCC11Q96J66 1382 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms