RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 C1orf115Q9H7X2 142 aa4.6□□□□□ -1.67
RNU6-1140P-201ENST00000410517 PRKAG2Q9UGJ0 569 aa4.6□□□□□ -1.67
RNU6-1140P-201ENST00000410517 MEGF11A6BM72 1044 aa4.59□□□□□ -1.67
RNU6-1140P-201ENST00000410517 LGR5O75473 907 aa4.59□□□□□ -1.67
RNU6-1140P-201ENST00000410517 CTSWP56202 376 aa4.59□□□□□ -1.67
RNU6-1140P-201ENST00000410517 HYAL2Q12891 473 aa4.59□□□□□ -1.67
RNU6-1140P-201ENST00000410517 BNIP3Q12983 259 aa4.59□□□□□ -1.67
RNU6-1140P-201ENST00000410517 MLANAQ16655 118 aa4.59□□□□□ -1.67
RNU6-1140P-201ENST00000410517 COL13A1Q5TAT6 717 aaPredicted RBP4.59□□□□□ -1.67
RNU6-1140P-201ENST00000410517 CDPF1Q6NVV7 123 aa4.59□□□□□ -1.67
RNU6-1140P-201ENST00000410517 STK11IPQ8N1F8 1099 aa4.59□□□□□ -1.67
RNU6-1140P-201ENST00000410517 HINFPQ9BQA5 517 aa4.59□□□□□ -1.67
RNU6-1140P-201ENST00000410517 PPP1R12CQ9BZL4 782 aa4.59□□□□□ -1.67
RNU6-1140P-201ENST00000410517 ALG2Q9H553 416 aa4.59□□□□□ -1.67
RNU6-1140P-201ENST00000410517 USP17L3A6NCW0 530 aa4.58□□□□□ -1.68
RNU6-1140P-201ENST00000410517 USP17L4A6NCW7 530 aa4.58□□□□□ -1.68
RNU6-1140P-201ENST00000410517 POM121CA8CG34 1229 aa4.58□□□□□ -1.68
RNU6-1140P-201ENST00000410517 ATP9BO43861 1147 aa4.58□□□□□ -1.68
RNU6-1140P-201ENST00000410517 TSPAN15O95858 294 aa4.58□□□□□ -1.68
RNU6-1140P-201ENST00000410517 RNASE1P07998 156 aaKnown RBP4.58□□□□□ -1.68
RNU6-1140P-201ENST00000410517 INHBBP09529 407 aa4.58□□□□□ -1.68
RNU6-1140P-201ENST00000410517 PTPRAP18433 802 aa4.58□□□□□ -1.68
RNU6-1140P-201ENST00000410517 PIP4K2BP78356 416 aa4.58□□□□□ -1.68
RNU6-1140P-201ENST00000410517 C11orf91Q3C1V1 193 aa4.58□□□□□ -1.68
RNU6-1140P-201ENST00000410517 USP17L2Q6R6M4 530 aa4.58□□□□□ -1.68
RNU6-1140P-201ENST00000410517 USP17L1Q7RTZ2 530 aa4.58□□□□□ -1.68
RNU6-1140P-201ENST00000410517 SIX5Q8N196 739 aa4.58□□□□□ -1.68
RNU6-1140P-201ENST00000410517 SLC7A3Q8WY07 619 aa4.58□□□□□ -1.68
RNU6-1140P-201ENST00000410517 PPP1R16BQ96T49 567 aa4.58□□□□□ -1.68
RNU6-1140P-201ENST00000410517 MBNL3Q9NUK0 354 aaKnown RBP4.58□□□□□ -1.68
RNU6-1140P-201ENST00000410517 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.58□□□□□ -1.68
RNU6-1140P-201ENST00000410517 KCNMB2Q9Y691 235 aa4.58□□□□□ -1.68
RNU6-1140P-201ENST00000410517 H3BRJ5 948 aa4.57□□□□□ -1.68
RNU6-1140P-201ENST00000410517 DRD2P14416 443 aa4.57□□□□□ -1.68
RNU6-1140P-201ENST00000410517 LMOD1P29536 600 aaPredicted RBP4.57□□□□□ -1.68
RNU6-1140P-201ENST00000410517 CABP4P57796 275 aa4.57□□□□□ -1.68
RNU6-1140P-201ENST00000410517 ZNF765Q7L2R6 523 aa4.57□□□□□ -1.68
RNU6-1140P-201ENST00000410517 NLRP13Q86W25 1043 aa4.57□□□□□ -1.68
RNU6-1140P-201ENST00000410517 WFDC3Q8IUB2 231 aa4.57□□□□□ -1.68
RNU6-1140P-201ENST00000410517 LRRN4CLQ8ND94 238 aa4.57□□□□□ -1.68
RNU6-1140P-201ENST00000410517 OR13H1Q8NG92 308 aa4.57□□□□□ -1.68
RNU6-1140P-201ENST00000410517 WNT8BQ93098 351 aa4.57□□□□□ -1.68
RNU6-1140P-201ENST00000410517 TRAIPQ9BWF2 469 aa4.57□□□□□ -1.68
RNU6-1140P-201ENST00000410517 VRTNQ9H8Y1 702 aa4.57□□□□□ -1.68
RNU6-1140P-201ENST00000410517 QTRT2Q9H974 415 aaKnown RBP4.57□□□□□ -1.68
RNU6-1140P-201ENST00000410517 CYP4F12Q9HCS2 524 aa4.57□□□□□ -1.68
RNU6-1140P-201ENST00000410517 OSGEPQ9NPF4 335 aa4.57□□□□□ -1.68
RNU6-1140P-201ENST00000410517 FAM53CQ9NYF3 392 aa4.57□□□□□ -1.68
RNU6-1140P-201ENST00000410517 MKRN1Q9UHC7 482 aaKnown RBP4.57□□□□□ -1.68
RNU6-1140P-201ENST00000410517 DKK1O94907 266 aa4.56□□□□□ -1.68
RNU6-1140P-201ENST00000410517 TIAF1O95411 115 aa4.56□□□□□ -1.68
RNU6-1140P-201ENST00000410517 FUT4P22083 530 aa4.56□□□□□ -1.68
RNU6-1140P-201ENST00000410517 RFX1P22670 979 aa4.56□□□□□ -1.68
RNU6-1140P-201ENST00000410517 SCNN1AP37088 669 aa4.56□□□□□ -1.68
RNU6-1140P-201ENST00000410517 CYP27A1Q02318 531 aa4.56□□□□□ -1.68
RNU6-1140P-201ENST00000410517 LARP1Q6PKG0 1096 aaKnown RBP4.56□□□□□ -1.68
RNU6-1140P-201ENST00000410517 TREML1Q86YW5 311 aa4.56□□□□□ -1.68
RNU6-1140P-201ENST00000410517 PLEKHM2Q8IWE5 1019 aa4.56□□□□□ -1.68
RNU6-1140P-201ENST00000410517 SMG8Q8ND04 991 aaKnown RBP4.56□□□□□ -1.68
RNU6-1140P-201ENST00000410517 PI4K2BQ8TCG2 481 aa4.56□□□□□ -1.68
RNU6-1140P-201ENST00000410517 GATA6Q92908 595 aa4.56□□□□□ -1.68
RNU6-1140P-201ENST00000410517 PBX4Q9BYU1 374 aa4.56□□□□□ -1.68
RNU6-1140P-201ENST00000410517 ADAMTS6Q9UKP5 1117 aa4.56□□□□□ -1.68
RNU6-1140P-201ENST00000410517 SEC13P55735 322 aa4.55□□□□□ -1.68
RNU6-1140P-201ENST00000410517 CRTC2Q53ET0 693 aaPredicted RBP4.55□□□□□ -1.68
RNU6-1140P-201ENST00000410517 SYDE1Q6ZW31 735 aaPredicted RBP4.55□□□□□ -1.68
RNU6-1140P-201ENST00000410517 POP1Q99575 1024 aaKnown RBP4.55□□□□□ -1.68
RNU6-1140P-201ENST00000410517 YIPF2Q9BWQ6 316 aa4.55□□□□□ -1.68
RNU6-1140P-201ENST00000410517 TMPRSS13Q9BYE2 586 aa4.55□□□□□ -1.68
RNU6-1140P-201ENST00000410517 TFIP11Q9UBB9 837 aaKnown RBP4.55□□□□□ -1.68
RNU6-1140P-201ENST00000410517 MTMR7Q9Y216 660 aa4.55□□□□□ -1.68
RNU6-1140P-201ENST00000410517 MAFBQ9Y5Q3 323 aaPredicted RBP4.55□□□□□ -1.68
RNU6-1140P-201ENST00000410517 ATG7O95352 703 aa4.54□□□□□ -1.68
RNU6-1140P-201ENST00000410517 CD8BP10966 210 aa4.54□□□□□ -1.68
RNU6-1140P-201ENST00000410517 IGFBP4P22692 258 aa4.54□□□□□ -1.68
RNU6-1140P-201ENST00000410517 ARL4DP49703 201 aa4.54□□□□□ -1.68
RNU6-1140P-201ENST00000410517 KCNA1Q09470 495 aa4.54□□□□□ -1.68
RNU6-1140P-201ENST00000410517 ELOAQ14241 798 aaKnown RBP4.54□□□□□ -1.68
RNU6-1140P-201ENST00000410517 DBX2Q6ZNG2 339 aa4.54□□□□□ -1.68
RNU6-1140P-201ENST00000410517 USP26Q9BXU7 913 aa4.54□□□□□ -1.68
RNU6-1140P-201ENST00000410517 SUGCTQ9HAC7 445 aa4.54□□□□□ -1.68
RNU6-1140P-201ENST00000410517 ZNF503-AS2A6NEH8 195 aa4.53□□□□□ -1.68
RNU6-1140P-201ENST00000410517 FAM196BA6NMK8 535 aa4.53□□□□□ -1.68
RNU6-1140P-201ENST00000410517 C19orf57Q0VDD7 668 aa4.53□□□□□ -1.68
RNU6-1140P-201ENST00000410517 CFAP70Q5T0N1 1121 aa4.53□□□□□ -1.68
RNU6-1140P-201ENST00000410517 TTC39BQ5VTQ0 682 aaPredicted RBP4.53□□□□□ -1.68
RNU6-1140P-201ENST00000410517 HGSNATQ68CP4 663 aa4.53□□□□□ -1.68
RNU6-1140P-201ENST00000410517 ZSWIM9Q86XI8 627 aa4.53□□□□□ -1.68
RNU6-1140P-201ENST00000410517 C2CD4AQ8NCU7 369 aaPredicted RBP4.53□□□□□ -1.68
RNU6-1140P-201ENST00000410517 EZH1Q92800 747 aaPredicted RBP4.53□□□□□ -1.68
RNU6-1140P-201ENST00000410517 VTI1AQ96AJ9 217 aa4.53□□□□□ -1.68
RNU6-1140P-201ENST00000410517 MISP3Q96FF7 219 aa4.53□□□□□ -1.68
RNU6-1140P-201ENST00000410517 CCDC9Q9Y3X0 531 aaKnown RBP4.53□□□□□ -1.68
RNU6-1140P-201ENST00000410517 BRD1O95696 1058 aa4.52□□□□□ -1.69
RNU6-1140P-201ENST00000410517 NFICP08651 508 aa4.52□□□□□ -1.69
RNU6-1140P-201ENST00000410517 C1QTNF9P0C862 333 aa4.52□□□□□ -1.69
RNU6-1140P-201ENST00000410517 TRIP4Q15650 581 aaPredicted RBP4.52□□□□□ -1.69
RNU6-1140P-201ENST00000410517 KCNMB1Q16558 191 aa4.52□□□□□ -1.69
RNU6-1140P-201ENST00000410517 AMIGO3Q86WK7 504 aa4.52□□□□□ -1.69
RNU6-1140P-201ENST00000410517 NCAPG2Q86XI2 1143 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms