RNA–Protein interactions for RNA: ENST00000410055.5

PDK1-203, Transcript of pyruvate dehydrogenase kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDK1, Length 2,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDK1-203ENST00000410055 DNAJC25Q9H1X3 360 aa19.46■□□□□ 0.71
PDK1-203ENST00000410055 TMOD3Q9NYL9 352 aa19.46■□□□□ 0.71
PDK1-203ENST00000410055 RNF113AO15541 343 aaKnown RBP19.46■□□□□ 0.71
PDK1-203ENST00000410055 SCARF1Q14162 830 aa19.45■□□□□ 0.7
PDK1-203ENST00000410055 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.45■□□□□ 0.76e-9■■■■■ 30.1
PDK1-203ENST00000410055 V9GYY5 206 aaPredicted RBP19.45■□□□□ 0.7
PDK1-203ENST00000410055 ADAMTSL3P82987 1691 aa19.45■□□□□ 0.7
PDK1-203ENST00000410055 ZMYM1Q5SVZ6 1142 aa19.45■□□□□ 0.7
PDK1-203ENST00000410055 FAM200AQ8TCP9 573 aa19.45■□□□□ 0.7
PDK1-203ENST00000410055 XAGE2Q96GT9 111 aa19.45■□□□□ 0.7
PDK1-203ENST00000410055 RESTQ13127 1097 aa19.44■□□□□ 0.7
PDK1-203ENST00000410055 NSUN7Q8NE18 718 aaKnown RBP19.44■□□□□ 0.7
PDK1-203ENST00000410055 TRIM5Q9C035 493 aa19.44■□□□□ 0.7
PDK1-203ENST00000410055 YY1AP1Q9H869 796 aa19.44■□□□□ 0.7
PDK1-203ENST00000410055 HELLSQ9NRZ9 838 aa19.44■□□□□ 0.7
PDK1-203ENST00000410055 BCCIPQ9P287 314 aaKnown RBP eCLIP19.44■□□□□ 0.7
PDK1-203ENST00000410055 ALS2Q96Q42 1657 aa19.44■□□□□ 0.7
PDK1-203ENST00000410055 KIF1AQ12756 1690 aa19.44■□□□□ 0.7
PDK1-203ENST00000410055 CAMTA1Q9Y6Y1 1673 aa19.44■□□□□ 0.7
PDK1-203ENST00000410055 ZAP70P43403 619 aa19.44■□□□□ 0.7
PDK1-203ENST00000410055 EFCC1Q9HA90 598 aa19.44■□□□□ 0.7
PDK1-203ENST00000410055 CBX8Q9HC52 389 aa19.44■□□□□ 0.7
PDK1-203ENST00000410055 SH3TC1Q8TE82 1336 aa19.43■□□□□ 0.7
PDK1-203ENST00000410055 ERVV-2B6SEH9 535 aa19.43■□□□□ 0.7
PDK1-203ENST00000410055 CTDNEP1O95476 244 aa19.43■□□□□ 0.7
PDK1-203ENST00000410055 C10orf67Q8IYJ2 551 aa19.43■□□□□ 0.7
PDK1-203ENST00000410055 ALDH8A1Q9H2A2 487 aaPredicted RBP19.43■□□□□ 0.7
PDK1-203ENST00000410055 ELP1O95163 1332 aa19.43■□□□□ 0.7
PDK1-203ENST00000410055 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.43■□□□□ 0.7
PDK1-203ENST00000410055 DHX16O60231 1041 aaKnown RBP19.42■□□□□ 0.7
PDK1-203ENST00000410055 IFIT5Q13325 482 aaKnown RBP19.42■□□□□ 0.7
PDK1-203ENST00000410055 GJB4Q9NTQ9 266 aa19.42■□□□□ 0.7
PDK1-203ENST00000410055 CFAP45Q9UL16 551 aa19.42■□□□□ 0.7
PDK1-203ENST00000410055 TRIM66O15016 1216 aa19.42■□□□□ 0.7
PDK1-203ENST00000410055 PFKFB2O60825 505 aa19.42■□□□□ 0.7
PDK1-203ENST00000410055 HMGB1P09429 215 aaKnown RBP19.42■□□□□ 0.7
PDK1-203ENST00000410055 PTGS1P23219 599 aa19.42■□□□□ 0.7
PDK1-203ENST00000410055 ME1P48163 572 aa19.42■□□□□ 0.7
PDK1-203ENST00000410055 ZNF165P49910 485 aa19.42■□□□□ 0.7
PDK1-203ENST00000410055 TCIRG1Q13488 830 aa19.42■□□□□ 0.7
PDK1-203ENST00000410055 KIF6Q6ZMV9 814 aa19.42■□□□□ 0.7
PDK1-203ENST00000410055 POLR3DP05423 398 aaPredicted RBP19.41■□□□□ 0.7
PDK1-203ENST00000410055 METTL24Q5JXM2 366 aa19.41■□□□□ 0.7
PDK1-203ENST00000410055 USP28Q96RU2 1077 aa19.41■□□□□ 0.7
PDK1-203ENST00000410055 DSCC1Q9BVC3 393 aa19.41■□□□□ 0.7
PDK1-203ENST00000410055 JCADQ9P266 1359 aa19.41■□□□□ 0.7
PDK1-203ENST00000410055 ARFGEF2Q9Y6D5 1785 aa19.41■□□□□ 0.7
PDK1-203ENST00000410055 NOP2P46087 812 aaKnown RBP19.41■□□□□ 0.7
PDK1-203ENST00000410055 LDHAL6AQ6ZMR3 332 aa19.41■□□□□ 0.7
PDK1-203ENST00000410055 CCAR1Q8IX12 1150 aaKnown RBP19.41■□□□□ 0.7
PDK1-203ENST00000410055 C16orf45Q96MC5 204 aaPredicted RBP19.41■□□□□ 0.7
PDK1-203ENST00000410055 DDX19AQ9NUU7 478 aaKnown RBP19.41■□□□□ 0.7
PDK1-203ENST00000410055 ADAMTS7Q9UKP4 1686 aa19.41■□□□□ 0.7
PDK1-203ENST00000410055 PDIA3P30101 505 aaKnown RBP19.41■□□□□ 0.7
PDK1-203ENST00000410055 BANK1Q8NDB2 785 aa19.41■□□□□ 0.7
PDK1-203ENST00000410055 PUS7LQ9H0K6 701 aaKnown RBP19.41■□□□□ 0.7
PDK1-203ENST00000410055 NRBP1Q9UHY1 535 aa19.41■□□□□ 0.7
PDK1-203ENST00000410055 HLFQ16534 295 aa19.4■□□□□ 0.7
PDK1-203ENST00000410055 KIAA1524Q8TCG1 905 aa19.4■□□□□ 0.7
PDK1-203ENST00000410055 CLSTN2Q9H4D0 955 aa19.4■□□□□ 0.7
PDK1-203ENST00000410055 HELBQ8NG08 1087 aaPredicted RBP19.4■□□□□ 0.7
PDK1-203ENST00000410055 ZSCAN16Q9H4T2 348 aaPredicted RBP19.4■□□□□ 0.7
PDK1-203ENST00000410055 CNNM1Q9NRU3 951 aa19.4■□□□□ 0.7
PDK1-203ENST00000410055 SLAIN2Q9P270 581 aa19.4■□□□□ 0.7
PDK1-203ENST00000410055 FGAP02671 866 aa19.39■□□□□ 0.7
PDK1-203ENST00000410055 CCDC186Q7Z3E2 898 aa19.39■□□□□ 0.7
PDK1-203ENST00000410055 RASSF4Q9H2L5 321 aa19.39■□□□□ 0.7
PDK1-203ENST00000410055 KCNF1Q9H3M0 494 aa19.39■□□□□ 0.7
PDK1-203ENST00000410055 MRC1P22897 1456 aa19.39■□□□□ 0.69
PDK1-203ENST00000410055 IDH1O75874 414 aaKnown RBP19.39■□□□□ 0.69
PDK1-203ENST00000410055 EXOSC10Q01780 885 aaKnown RBP19.39■□□□□ 0.69
PDK1-203ENST00000410055 NPHP1O15259 732 aa19.38■□□□□ 0.69
PDK1-203ENST00000410055 RXRAP19793 462 aa19.38■□□□□ 0.69
PDK1-203ENST00000410055 CT47A1Q5JQC4 288 aaPredicted RBP19.38■□□□□ 0.69
PDK1-203ENST00000410055 NEK11Q8NG66 645 aa19.38■□□□□ 0.69
PDK1-203ENST00000410055 PIGBQ92521 554 aa19.38■□□□□ 0.69
PDK1-203ENST00000410055 COL18A1P39060 1754 aa19.38■□□□□ 0.69
PDK1-203ENST00000410055 LRMPQ12912 555 aa19.38■□□□□ 0.69
PDK1-203ENST00000410055 IMMTQ16891 758 aaKnown RBP19.38■□□□□ 0.69
PDK1-203ENST00000410055 DENND2AQ9ULE3 1009 aa19.38■□□□□ 0.69
PDK1-203ENST00000410055 TBC1D2BQ9UPU7 963 aa19.38■□□□□ 0.69
PDK1-203ENST00000410055 PALLDQ8WX93 1383 aa19.38■□□□□ 0.69
PDK1-203ENST00000410055 KLF18A0A0U1RQI7 1052 aa19.38■□□□□ 0.69
PDK1-203ENST00000410055 GOLGA6L6A8MZA4 724 aa19.38■□□□□ 0.69
PDK1-203ENST00000410055 KMT5BQ4FZB7 885 aa19.38■□□□□ 0.69
PDK1-203ENST00000410055 TMED8Q6PL24 325 aaPredicted RBP19.38■□□□□ 0.69
PDK1-203ENST00000410055 STK11IPQ8N1F8 1099 aa19.38■□□□□ 0.69
PDK1-203ENST00000410055 SMARCC2Q8TAQ2 1214 aa19.38■□□□□ 0.69
PDK1-203ENST00000410055 GREM2Q9H772 168 aa19.38■□□□□ 0.69
PDK1-203ENST00000410055 CPLX1O14810 134 aa19.37■□□□□ 0.69
PDK1-203ENST00000410055 CCDC73Q6ZRK6 1079 aa19.37■□□□□ 0.69
PDK1-203ENST00000410055 RALYLQ86SE5 291 aaKnown RBP19.37■□□□□ 0.69
PDK1-203ENST00000410055 NOL10Q9BSC4 688 aaKnown RBP19.37■□□□□ 0.69
PDK1-203ENST00000410055 GPR108Q9NPR9 543 aa19.37■□□□□ 0.69
PDK1-203ENST00000410055 GOLGA8BA8MQT2 603 aa19.37■□□□□ 0.69
PDK1-203ENST00000410055 PRC1O43663 620 aa19.37■□□□□ 0.69
PDK1-203ENST00000410055 SF3A1Q15459 793 aaKnown RBP19.37■□□□□ 0.69
PDK1-203ENST00000410055 ZNF592Q92610 1267 aa19.37■□□□□ 0.69
PDK1-203ENST00000410055 GOLPH3LQ9H4A5 285 aa19.37■□□□□ 0.69
PDK1-203ENST00000410055 AKAP2Q9Y2D5 859 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms