RNA–Protein interactions for RNA: ENST00000409886.3

RGPD3-202, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD3, Length 5,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-202ENST00000409886 GIMAP6Q6P9H5 292 aa3.84□□□□□ -1.8
RGPD3-202ENST00000409886 G2E3Q7L622 706 aa3.84□□□□□ -1.8
RGPD3-202ENST00000409886 CTNNA3Q9UI47 895 aa3.84□□□□□ -1.8
RGPD3-202ENST00000409886 UNCXA6NJT0 531 aa3.83□□□□□ -1.8
RGPD3-202ENST00000409886 DDNO94850 711 aaPredicted RBP3.83□□□□□ -1.8
RGPD3-202ENST00000409886 MVPQ14764 893 aaKnown RBP3.83□□□□□ -1.8
RGPD3-202ENST00000409886 RALBP1Q15311 655 aa3.83□□□□□ -1.8
RGPD3-202ENST00000409886 KLHL40Q2TBA0 621 aa3.83□□□□□ -1.8
RGPD3-202ENST00000409886 ADCK5Q3MIX3 580 aa3.83□□□□□ -1.8
RGPD3-202ENST00000409886 NUTM2GQ5VZR2 741 aa3.83□□□□□ -1.8
RGPD3-202ENST00000409886 CACTINQ8WUQ7 758 aaKnown RBP3.83□□□□□ -1.8
RGPD3-202ENST00000409886 ARHGEF1Q92888 912 aaKnown RBP3.83□□□□□ -1.8
RGPD3-202ENST00000409886 GGNBP2Q9H3C7 697 aa3.83□□□□□ -1.8
RGPD3-202ENST00000409886 MIS18AQ9NYP9 233 aa3.83□□□□□ -1.8
RGPD3-202ENST00000409886 CHD9Q3L8U1 2897 aa3.83□□□□□ -1.8
RGPD3-202ENST00000409886 COL4A1P02462 1669 aa3.83□□□□□ -1.8
RGPD3-202ENST00000409886 PRMT2P55345 433 aa3.83□□□□□ -1.8
RGPD3-202ENST00000409886 C2CD5Q86YS7 1000 aa3.83□□□□□ -1.8
RGPD3-202ENST00000409886 HCN4Q9Y3Q4 1203 aa3.83□□□□□ -1.8
RGPD3-202ENST00000409886 ALPK3Q96L96 1907 aa3.83□□□□□ -1.8
RGPD3-202ENST00000409886 ZNF541Q9H0D2 1346 aa3.83□□□□□ -1.8
RGPD3-202ENST00000409886 H0YGN5 161 aa3.83□□□□□ -1.8
RGPD3-202ENST00000409886 NKRFO15226 690 aaKnown RBP eCLIP3.83□□□□□ -1.8
RGPD3-202ENST00000409886 PDIA4P13667 645 aaKnown RBP3.83□□□□□ -1.8
RGPD3-202ENST00000409886 ARHGEF6Q15052 776 aa3.83□□□□□ -1.8
RGPD3-202ENST00000409886 IRX2Q9BZI1 471 aaPredicted RBP3.83□□□□□ -1.8
RGPD3-202ENST00000409886 MTMR10Q9NXD2 777 aa3.83□□□□□ -1.8
RGPD3-202ENST00000409886 ARID1AO14497 2285 aa3.83□□□□□ -1.8
RGPD3-202ENST00000409886 SAMD7Q7Z3H4 446 aa3.83□□□□□ -1.8
RGPD3-202ENST00000409886 RGS22Q8NE09 1264 aa3.83□□□□□ -1.8
RGPD3-202ENST00000409886 ERO1AQ96HE7 468 aa3.83□□□□□ -1.8
RGPD3-202ENST00000409886 MEIS3Q99687 375 aa3.83□□□□□ -1.8
RGPD3-202ENST00000409886 BRIP1Q9BX63 1249 aa3.83□□□□□ -1.8
RGPD3-202ENST00000409886 IBTKQ9P2D0 1353 aaPredicted RBP3.83□□□□□ -1.8
RGPD3-202ENST00000409886 MAST2Q6P0Q8 1798 aa3.82□□□□□ -1.8
RGPD3-202ENST00000409886 RTTNQ86VV8 2226 aa3.82□□□□□ -1.8
RGPD3-202ENST00000409886 PHF14O94880 888 aa3.82□□□□□ -1.8
RGPD3-202ENST00000409886 PDE3AQ14432 1141 aa3.82□□□□□ -1.8
RGPD3-202ENST00000409886 CLEC11AQ9Y240 323 aa3.82□□□□□ -1.8
RGPD3-202ENST00000409886 TAF1P21675 1872 aa3.82□□□□□ -1.8
RGPD3-202ENST00000409886 F6X3S4 739 aa3.82□□□□□ -1.8
RGPD3-202ENST00000409886 GNRH1P01148 92 aa3.82□□□□□ -1.8
RGPD3-202ENST00000409886 SDSP20132 328 aa3.82□□□□□ -1.8
RGPD3-202ENST00000409886 ITPK1Q13572 414 aa3.82□□□□□ -1.8
RGPD3-202ENST00000409886 UBE2Q1Q7Z7E8 422 aa3.82□□□□□ -1.8
RGPD3-202ENST00000409886 EHD4Q9H223 541 aa3.82□□□□□ -1.8
RGPD3-202ENST00000409886 HDAC9Q9UKV0 1011 aa3.82□□□□□ -1.8
RGPD3-202ENST00000409886 ZNF215Q9UL58 517 aaPredicted RBP3.82□□□□□ -1.8
RGPD3-202ENST00000409886 NR2E3Q9Y5X4 410 aa3.82□□□□□ -1.8
RGPD3-202ENST00000409886 ALPK2Q86TB3 2170 aa3.82□□□□□ -1.8
RGPD3-202ENST00000409886 A0A087WZG4 1122 aa3.82□□□□□ -1.8
RGPD3-202ENST00000409886 TATP17735 454 aaPredicted RBP3.82□□□□□ -1.8
RGPD3-202ENST00000409886 LIG1P18858 919 aa3.82□□□□□ -1.8
RGPD3-202ENST00000409886 CNKSR2Q8WXI2 1034 aa3.82□□□□□ -1.8
RGPD3-202ENST00000409886 SECISBP2LQ93073 1101 aaKnown RBP3.82□□□□□ -1.8
RGPD3-202ENST00000409886 NDUFB9Q9Y6M9 179 aa3.82□□□□□ -1.8
RGPD3-202ENST00000409886 SALL3Q9BXA9 1300 aa3.82□□□□□ -1.8
RGPD3-202ENST00000409886 KIF23Q02241 960 aaPredicted RBP3.82□□□□□ -1.8
RGPD3-202ENST00000409886 SREBF2Q12772 1141 aa3.82□□□□□ -1.8
RGPD3-202ENST00000409886 FKBP5Q13451 457 aaPredicted RBP3.82□□□□□ -1.8
RGPD3-202ENST00000409886 FBXO38Q6PIJ6 1188 aa3.82□□□□□ -1.8
RGPD3-202ENST00000409886 AEBP1Q8IUX7 1158 aa3.82□□□□□ -1.8
RGPD3-202ENST00000409886 TRAK1Q9UPV9 953 aa3.82□□□□□ -1.8
RGPD3-202ENST00000409886 PNMA6EA0A0J9YXQ4 647 aa3.81□□□□□ -1.8
RGPD3-202ENST00000409886 ERVV-2B6SEH9 535 aa3.81□□□□□ -1.8
RGPD3-202ENST00000409886 UBE2Q2LH0YL09 131 aa3.81□□□□□ -1.8
RGPD3-202ENST00000409886 VAMP4O75379 141 aa3.81□□□□□ -1.8
RGPD3-202ENST00000409886 CHRNA5P30532 468 aa3.81□□□□□ -1.8
RGPD3-202ENST00000409886 EAPPQ56P03 285 aaPredicted RBP3.81□□□□□ -1.8
RGPD3-202ENST00000409886 REXO1L1PQ8IX06 675 aa3.81□□□□□ -1.8
RGPD3-202ENST00000409886 C7orf43Q8WVR3 580 aa3.81□□□□□ -1.8
RGPD3-202ENST00000409886 ANKRD7Q92527 254 aa3.81□□□□□ -1.8
RGPD3-202ENST00000409886 CHMP3Q9Y3E7 222 aa3.81□□□□□ -1.8
RGPD3-202ENST00000409886 PCM1Q15154 2024 aa3.81□□□□□ -1.8
RGPD3-202ENST00000409886 KLRG2A4D1S0 409 aaPredicted RBP3.81□□□□□ -1.8
RGPD3-202ENST00000409886 UPP2O95045 317 aa3.81□□□□□ -1.8
RGPD3-202ENST00000409886 ZNF333Q96JL9 665 aa3.81□□□□□ -1.8
RGPD3-202ENST00000409886 MED15Q96RN5 788 aa3.81□□□□□ -1.8
RGPD3-202ENST00000409886 PTPN22Q9Y2R2 807 aa3.81□□□□□ -1.8
RGPD3-202ENST00000409886 SOS1Q07889 1333 aaPredicted RBP3.81□□□□□ -1.8
RGPD3-202ENST00000409886 CARMIL3Q8ND23 1372 aa3.81□□□□□ -1.8
RGPD3-202ENST00000409886 CELF2O95319 508 aaKnown RBP3.81□□□□□ -1.8
RGPD3-202ENST00000409886 SRPK2P78362 688 aaKnown RBP3.81□□□□□ -1.8
RGPD3-202ENST00000409886 NUCB1Q02818 461 aa3.81□□□□□ -1.8
RGPD3-202ENST00000409886 LUZP1Q86V48 1076 aa3.81□□□□□ -1.8
RGPD3-202ENST00000409886 RASAL3Q86YV0 1011 aa3.81□□□□□ -1.8
RGPD3-202ENST00000409886 MYRIPQ8NFW9 859 aa3.81□□□□□ -1.8
RGPD3-202ENST00000409886 TMEM106CQ9BVX2 250 aa3.81□□□□□ -1.8
RGPD3-202ENST00000409886 TSKSQ9UJT2 592 aa3.81□□□□□ -1.8
RGPD3-202ENST00000409886 ZNF469Q96JG9 3925 aaPredicted RBP3.81□□□□□ -1.8
RGPD3-202ENST00000409886 TULP2O00295 520 aa3.81□□□□□ -1.8
RGPD3-202ENST00000409886 IARSP41252 1262 aaKnown RBP3.81□□□□□ -1.8
RGPD3-202ENST00000409886 EIF6P56537 245 aaKnown RBP3.81□□□□□ -1.8
RGPD3-202ENST00000409886 ATF7IPQ6VMQ6 1270 aa3.81□□□□□ -1.8
RGPD3-202ENST00000409886 CHRDL2Q6WN34 429 aa3.81□□□□□ -1.8
RGPD3-202ENST00000409886 CDC37L1Q7L3B6 337 aa3.81□□□□□ -1.8
RGPD3-202ENST00000409886 EDC3Q96F86 508 aaKnown RBP3.81□□□□□ -1.8
RGPD3-202ENST00000409886 GPR25O00155 361 aa3.81□□□□□ -1.8
RGPD3-202ENST00000409886 HMOX1P09601 288 aa3.81□□□□□ -1.8
RGPD3-202ENST00000409886 EIF5P55010 431 aaKnown RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms