RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 AKAP2Q9Y2D5 859 aa9□□□□□ -0.97
CXCR4-202ENST00000409817 SPEF2Q9C093 1822 aa9□□□□□ -0.97
CXCR4-202ENST00000409817 GOLGA6L22H0YM25 854 aa9□□□□□ -0.97
CXCR4-202ENST00000409817 KDM4AO75164 1064 aa9□□□□□ -0.97
CXCR4-202ENST00000409817 ZKSCAN1P17029 563 aaPredicted RBP9□□□□□ -0.97
CXCR4-202ENST00000409817 SKOR2Q2VWA4 1001 aaPredicted RBP9□□□□□ -0.97
CXCR4-202ENST00000409817 RNF20Q5VTR2 975 aa9□□□□□ -0.97
CXCR4-202ENST00000409817 NLRP10Q86W26 655 aa9□□□□□ -0.97
CXCR4-202ENST00000409817 RDH13Q8NBN7 331 aa9□□□□□ -0.97
CXCR4-202ENST00000409817 TNPO1Q92973 898 aaKnown RBP9□□□□□ -0.97
CXCR4-202ENST00000409817 TMX3Q96JJ7 454 aa9□□□□□ -0.97
CXCR4-202ENST00000409817 CEP126Q9P2H0 1117 aa9□□□□□ -0.97
CXCR4-202ENST00000409817 ZBTB1Q9Y2K1 713 aa9□□□□□ -0.97
CXCR4-202ENST00000409817 ZNF330Q9Y3S2 320 aaPredicted RBP9□□□□□ -0.97
CXCR4-202ENST00000409817 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9□□□□□ -0.97
CXCR4-202ENST00000409817 RREB1Q92766 1687 aa9□□□□□ -0.97
CXCR4-202ENST00000409817 ZNF609O15014 1411 aa8.99□□□□□ -0.97
CXCR4-202ENST00000409817 KAT6BQ8WYB5 2073 aa8.99□□□□□ -0.97
CXCR4-202ENST00000409817 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.99□□□□□ -0.97
CXCR4-202ENST00000409817 ABCC12Q96J65 1359 aa8.99□□□□□ -0.97
CXCR4-202ENST00000409817 MED23Q9ULK4 1368 aa8.99□□□□□ -0.97
CXCR4-202ENST00000409817 RAD21O60216 631 aa8.99□□□□□ -0.97
CXCR4-202ENST00000409817 GCGRP47871 477 aa8.99□□□□□ -0.97
CXCR4-202ENST00000409817 EIF5P55010 431 aaKnown RBP8.99□□□□□ -0.97
CXCR4-202ENST00000409817 IFIT5Q13325 482 aaKnown RBP8.99□□□□□ -0.97
CXCR4-202ENST00000409817 VPS72Q15906 364 aa8.99□□□□□ -0.97
CXCR4-202ENST00000409817 LRRFIP1Q32MZ4 808 aaKnown RBP8.99□□□□□ -0.97
CXCR4-202ENST00000409817 DZIP3Q86Y13 1208 aaKnown RBP8.99□□□□□ -0.97
CXCR4-202ENST00000409817 MARCH10Q8NA82 808 aaPredicted RBP8.99□□□□□ -0.97
CXCR4-202ENST00000409817 MAP4K1Q92918 833 aa8.99□□□□□ -0.97
CXCR4-202ENST00000409817 HMG20BQ9P0W2 317 aa8.99□□□□□ -0.97
CXCR4-202ENST00000409817 SNX14Q9Y5W7 946 aa8.99□□□□□ -0.97
CXCR4-202ENST00000409817 PALLDQ8WX93 1383 aa8.99□□□□□ -0.97
CXCR4-202ENST00000409817 SPATA31A6Q5VVP1 1343 aa8.98□□□□□ -0.97
CXCR4-202ENST00000409817 NUTM2BA6NNL0 878 aaPredicted RBP8.98□□□□□ -0.97
CXCR4-202ENST00000409817 NUTM2EB1AL46 878 aaPredicted RBP8.98□□□□□ -0.97
CXCR4-202ENST00000409817 HOXA2O43364 376 aa8.98□□□□□ -0.97
CXCR4-202ENST00000409817 CYP2E1P05181 493 aaPredicted RBP8.98□□□□□ -0.97
CXCR4-202ENST00000409817 PSMA5P28066 241 aa8.98□□□□□ -0.97
CXCR4-202ENST00000409817 PIP4K2BP78356 416 aa8.98□□□□□ -0.97
CXCR4-202ENST00000409817 NMIQ13287 307 aaPredicted RBP8.98□□□□□ -0.97
CXCR4-202ENST00000409817 NECTIN1Q15223 517 aa8.98□□□□□ -0.97
CXCR4-202ENST00000409817 NUTM2AQ8IVF1 878 aaPredicted RBP8.98□□□□□ -0.97
CXCR4-202ENST00000409817 HLA-CQ95604 372 aa8.98□□□□□ -0.97
CXCR4-202ENST00000409817 DBNDD2Q9BQY9 259 aa8.98□□□□□ -0.97
CXCR4-202ENST00000409817 CCDC87Q9NVE4 849 aa8.98□□□□□ -0.97
CXCR4-202ENST00000409817 NUP98P52948 1817 aa8.98□□□□□ -0.97
CXCR4-202ENST00000409817 MYH3P11055 1940 aa8.98□□□□□ -0.97
CXCR4-202ENST00000409817 LOC102724428A0A0B4J2F2 783 aa8.98□□□□□ -0.97
CXCR4-202ENST00000409817 SIK1P57059 783 aa8.98□□□□□ -0.97
CXCR4-202ENST00000409817 TSGA10IPQ3SY00 556 aa8.98□□□□□ -0.97
CXCR4-202ENST00000409817 PARP10Q53GL7 1025 aa8.98□□□□□ -0.97
CXCR4-202ENST00000409817 TAF7LQ5H9L4 462 aa8.98□□□□□ -0.97
CXCR4-202ENST00000409817 SWT1Q5T5J6 900 aaKnown RBP8.98□□□□□ -0.97
CXCR4-202ENST00000409817 DMRTA1Q5VZB9 504 aa8.98□□□□□ -0.97
CXCR4-202ENST00000409817 ZNF34Q8IZ26 560 aa8.98□□□□□ -0.97
CXCR4-202ENST00000409817 KBTBD3Q8NAB2 608 aa8.98□□□□□ -0.97
CXCR4-202ENST00000409817 TTC14Q96N46 770 aa8.98□□□□□ -0.97
CXCR4-202ENST00000409817 SEPT9Q9UHD8 586 aaPredicted RBP8.98□□□□□ -0.97
CXCR4-202ENST00000409817 PCDHGC3Q9UN70 934 aa8.98□□□□□ -0.97
CXCR4-202ENST00000409817 CCDC9Q9Y3X0 531 aaKnown RBP8.98□□□□□ -0.97
CXCR4-202ENST00000409817 SH3TC1Q8TE82 1336 aa8.97□□□□□ -0.97
CXCR4-202ENST00000409817 UBAP1LF5GYI3 381 aa8.97□□□□□ -0.97
CXCR4-202ENST00000409817 PDE8AO60658 829 aa8.97□□□□□ -0.97
CXCR4-202ENST00000409817 PDIA4P13667 645 aaKnown RBP8.97□□□□□ -0.97
CXCR4-202ENST00000409817 ATP6V1AP38606 617 aa8.97□□□□□ -0.97
CXCR4-202ENST00000409817 CTSWP56202 376 aa8.97□□□□□ -0.97
CXCR4-202ENST00000409817 KRT32Q14532 448 aa8.97□□□□□ -0.97
CXCR4-202ENST00000409817 HLFQ16534 295 aa8.97□□□□□ -0.97
CXCR4-202ENST00000409817 VPS53Q5VIR6 699 aa8.97□□□□□ -0.97
CXCR4-202ENST00000409817 FAM89AQ96GI7 184 aa8.97□□□□□ -0.97
CXCR4-202ENST00000409817 ZSCAN31Q96LW9 406 aaPredicted RBP8.97□□□□□ -0.97
CXCR4-202ENST00000409817 RABGEF1Q9UJ41 708 aa8.97□□□□□ -0.97
CXCR4-202ENST00000409817 BCL9LQ86UU0 1499 aa8.96□□□□□ -0.97
CXCR4-202ENST00000409817 A0A1B0GUL7 405 aa8.96□□□□□ -0.97
CXCR4-202ENST00000409817 ANKRD18BA2A2Z9 1011 aa8.96□□□□□ -0.97
CXCR4-202ENST00000409817 KCNJ4P48050 445 aa8.96□□□□□ -0.97
CXCR4-202ENST00000409817 PTH1RQ03431 593 aa8.96□□□□□ -0.97
CXCR4-202ENST00000409817 MCMDC2Q4G0Z9 681 aa8.96□□□□□ -0.97
CXCR4-202ENST00000409817 LRRC24Q50LG9 513 aa8.96□□□□□ -0.97
CXCR4-202ENST00000409817 CCDC158Q5M9N0 1113 aa8.96□□□□□ -0.97
CXCR4-202ENST00000409817 USPL1Q5W0Q7 1092 aa8.96□□□□□ -0.97
CXCR4-202ENST00000409817 INTS5Q6P9B9 1019 aaKnown RBP8.96□□□□□ -0.97
CXCR4-202ENST00000409817 TTLL11Q8NHH1 800 aa8.96□□□□□ -0.97
CXCR4-202ENST00000409817 FAM227BQ96M60 508 aa8.96□□□□□ -0.97
CXCR4-202ENST00000409817 NEUROD6Q96NK8 337 aa8.96□□□□□ -0.97
CXCR4-202ENST00000409817 UPF3BQ9BZI7 483 aaKnown RBP8.96□□□□□ -0.97
CXCR4-202ENST00000409817 ALDH8A1Q9H2A2 487 aaPredicted RBP8.96□□□□□ -0.97
CXCR4-202ENST00000409817 GDPD2Q9HCC8 539 aa8.96□□□□□ -0.97
CXCR4-202ENST00000409817 SH2B1Q9NRF2 756 aaPredicted RBP8.96□□□□□ -0.97
CXCR4-202ENST00000409817 HELLSQ9NRZ9 838 aa8.96□□□□□ -0.97
CXCR4-202ENST00000409817 TRMT112Q9UI30 125 aaKnown RBP8.96□□□□□ -0.97
CXCR4-202ENST00000409817 ISY1Q9ULR0 285 aaKnown RBP8.96□□□□□ -0.97
CXCR4-202ENST00000409817 LIMCH1Q9UPQ0 1083 aa8.96□□□□□ -0.97
CXCR4-202ENST00000409817 RBM8AQ9Y5S9 174 aaKnown RBP8.96□□□□□ -0.97
CXCR4-202ENST00000409817 CYP46A1Q9Y6A2 500 aa8.96□□□□□ -0.97
CXCR4-202ENST00000409817 A0A0D9SFI3 127 aa8.96□□□□□ -0.98
CXCR4-202ENST00000409817 SOCS7O14512 581 aa8.96□□□□□ -0.98
CXCR4-202ENST00000409817 IRS4O14654 1257 aaPredicted RBP8.96□□□□□ -0.98
CXCR4-202ENST00000409817 CRKLP46109 303 aaKnown RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms