RNA–Protein interactions for RNA: ENST00000409115.7

PTMA-202, Transcript of prothymosin alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTMA, Length 1,221 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMA-202ENST00000409115 PDZRN3Q9UPQ7 1066 aa12.73□□□□□ -0.37
PTMA-202ENST00000409115 DXOO77932 396 aaKnown RBP12.72□□□□□ -0.37
PTMA-202ENST00000409115 FKBP4Q02790 459 aaKnown RBP eCLIP12.72□□□□□ -0.376e-9■■■■■ 44.9
PTMA-202ENST00000409115 HLFQ16534 295 aa12.72□□□□□ -0.37
PTMA-202ENST00000409115 PTPRNQ16849 979 aa12.72□□□□□ -0.37
PTMA-202ENST00000409115 LDHDQ86WU2 507 aa12.72□□□□□ -0.37
PTMA-202ENST00000409115 NIP7Q9Y221 180 aaKnown RBP eCLIP12.72□□□□□ -0.37
PTMA-202ENST00000409115 NPR1P16066 1061 aa12.71□□□□□ -0.37
PTMA-202ENST00000409115 VEGFBP49765 207 aa12.71□□□□□ -0.37
PTMA-202ENST00000409115 MMP16P51512 607 aa12.71□□□□□ -0.37
PTMA-202ENST00000409115 FMR1Q06787 632 aaKnown RBP eCLIP12.71□□□□□ -0.37
PTMA-202ENST00000409115 TRIM34Q9BYJ4 488 aa12.71□□□□□ -0.37
PTMA-202ENST00000409115 SLC6A16Q9GZN6 736 aa12.71□□□□□ -0.37
PTMA-202ENST00000409115 MIS18AQ9NYP9 233 aa12.71□□□□□ -0.37
PTMA-202ENST00000409115 DDX60Q8IY21 1712 aaKnown RBP12.71□□□□□ -0.38
PTMA-202ENST00000409115 IQCA1LA6NCM1 817 aa12.7□□□□□ -0.38
PTMA-202ENST00000409115 ABL2P42684 1182 aa12.7□□□□□ -0.38
PTMA-202ENST00000409115 SOGA3Q5TF21 947 aa12.7□□□□□ -0.38
PTMA-202ENST00000409115 MAP1SQ66K74 1059 aaPredicted RBP12.7□□□□□ -0.38
PTMA-202ENST00000409115 NGEFQ8N5V2 710 aa12.7□□□□□ -0.38
PTMA-202ENST00000409115 ZNF652Q9Y2D9 606 aa12.7□□□□□ -0.38
PTMA-202ENST00000409115 CASP8AP2Q9UKL3 1982 aa12.7□□□□□ -0.38
PTMA-202ENST00000409115 POLR2AP24928 1970 aaKnown RBP12.69□□□□□ -0.38
PTMA-202ENST00000409115 ITGBL1O95965 494 aaPredicted RBP12.69□□□□□ -0.38
PTMA-202ENST00000409115 SNRPA1P09661 255 aaKnown RBP12.69□□□□□ -0.38
PTMA-202ENST00000409115 U2AF1L5P0DN76 240 aaPredicted RBP12.69□□□□□ -0.38
PTMA-202ENST00000409115 EPHX2P34913 555 aa12.69□□□□□ -0.38
PTMA-202ENST00000409115 IARSP41252 1262 aaKnown RBP12.69□□□□□ -0.38
PTMA-202ENST00000409115 U2AF1Q01081 240 aaKnown RBP eCLIP12.69□□□□□ -0.38
PTMA-202ENST00000409115 NR6A1Q15406 480 aa12.69□□□□□ -0.38
PTMA-202ENST00000409115 NUDT12Q9BQG2 462 aa12.69□□□□□ -0.38
PTMA-202ENST00000409115 HACL1Q9UJ83 578 aa12.69□□□□□ -0.38
PTMA-202ENST00000409115 LRRC37AA6NMS7 1700 aa12.68□□□□□ -0.38
PTMA-202ENST00000409115 TMEM88BA6NKF7 163 aa12.68□□□□□ -0.38
PTMA-202ENST00000409115 CCNYL3P0C7X3 344 aa12.68□□□□□ -0.38
PTMA-202ENST00000409115 WWC1Q8IX03 1113 aa12.68□□□□□ -0.38
PTMA-202ENST00000409115 SYNE4Q8N205 404 aa12.68□□□□□ -0.38
PTMA-202ENST00000409115 EPS8L1Q8TE68 723 aa12.68□□□□□ -0.38
PTMA-202ENST00000409115 CFAP53Q96M91 514 aa12.68□□□□□ -0.38
PTMA-202ENST00000409115 RIC1Q4ADV7 1423 aa12.68□□□□□ -0.38
PTMA-202ENST00000409115 COL4A1P02462 1669 aa12.67□□□□□ -0.38
PTMA-202ENST00000409115 UBN2Q6ZU65 1347 aa12.67□□□□□ -0.38
PTMA-202ENST00000409115 KLRG2A4D1S0 409 aaPredicted RBP12.67□□□□□ -0.38
PTMA-202ENST00000409115 TRAK2O60296 914 aa12.67□□□□□ -0.38
PTMA-202ENST00000409115 GPTP24298 496 aa12.67□□□□□ -0.38
PTMA-202ENST00000409115 LBX1P52954 281 aa12.67□□□□□ -0.38
PTMA-202ENST00000409115 KCNC4Q03721 635 aa12.67□□□□□ -0.38
PTMA-202ENST00000409115 CLEC4GQ6UXB4 293 aa12.67□□□□□ -0.38
PTMA-202ENST00000409115 TTLL7Q6ZT98 887 aa12.67□□□□□ -0.38
PTMA-202ENST00000409115 NKX2-3Q8TAU0 364 aa12.67□□□□□ -0.38
PTMA-202ENST00000409115 RTF1Q92541 710 aaKnown RBP12.67□□□□□ -0.38
PTMA-202ENST00000409115 THUMPD2Q9BTF0 503 aaKnown RBP12.67□□□□□ -0.38
PTMA-202ENST00000409115 GJA3Q9Y6H8 435 aa12.67□□□□□ -0.38
PTMA-202ENST00000409115 TCERG1O14776 1098 aaKnown RBP12.66□□□□□ -0.38
PTMA-202ENST00000409115 F12P00748 615 aaPredicted RBP12.66□□□□□ -0.38
PTMA-202ENST00000409115 PPP2R1AP30153 589 aa12.66□□□□□ -0.38
PTMA-202ENST00000409115 CTHP32929 405 aa12.66□□□□□ -0.38
PTMA-202ENST00000409115 PNMA1Q8ND90 353 aa12.66□□□□□ -0.38
PTMA-202ENST00000409115 AIDAQ96BJ3 306 aa12.66□□□□□ -0.38
PTMA-202ENST00000409115 DUOX1Q9NRD9 1551 aa12.65□□□□□ -0.38
PTMA-202ENST00000409115 SPEF2Q9C093 1822 aa12.65□□□□□ -0.38
PTMA-202ENST00000409115 FZD9O00144 591 aa12.65□□□□□ -0.38
PTMA-202ENST00000409115 S1PR4O95977 384 aa12.65□□□□□ -0.38
PTMA-202ENST00000409115 GTF2E1P29083 439 aaPredicted RBP12.65□□□□□ -0.38
PTMA-202ENST00000409115 GRM1Q13255 1194 aa12.65□□□□□ -0.38
PTMA-202ENST00000409115 TPTE2Q6XPS3 522 aa12.65□□□□□ -0.38
PTMA-202ENST00000409115 MAP10Q9P2G4 905 aa12.65□□□□□ -0.38
PTMA-202ENST00000409115 HSPA8P11142 646 aaKnown RBP12.64□□□□□ -0.39
PTMA-202ENST00000409115 MYL6BP14649 208 aa12.64□□□□□ -0.39
PTMA-202ENST00000409115 CTCFP49711 727 aaPredicted RBP12.64□□□□□ -0.39
PTMA-202ENST00000409115 CNTROBQ8N137 903 aa12.64□□□□□ -0.39
PTMA-202ENST00000409115 ABT1Q9ULW3 272 aaKnown RBP12.64□□□□□ -0.39
PTMA-202ENST00000409115 RRP7AQ9Y3A4 280 aaKnown RBP12.64□□□□□ -0.39
PTMA-202ENST00000409115 MAP3K15Q6ZN16 1313 aa12.63□□□□□ -0.39
PTMA-202ENST00000409115 RASSF10A6NK89 507 aa12.63□□□□□ -0.39
PTMA-202ENST00000409115 TRAF5O00463 557 aa12.63□□□□□ -0.39
PTMA-202ENST00000409115 EPS15P42566 896 aa12.63□□□□□ -0.39
PTMA-202ENST00000409115 SCNN1DP51172 638 aa12.63□□□□□ -0.39
PTMA-202ENST00000409115 CRY2Q49AN0 593 aa12.63□□□□□ -0.39
PTMA-202ENST00000409115 RTKN2Q8IZC4 609 aa12.63□□□□□ -0.39
PTMA-202ENST00000409115 PRDM10Q9NQV6 1147 aa12.63□□□□□ -0.39
PTMA-202ENST00000409115 NUDCQ9Y266 331 aa12.63□□□□□ -0.39
PTMA-202ENST00000409115 SCN9AQ15858 1988 aa12.63□□□□□ -0.39
PTMA-202ENST00000409115 WDR33Q9C0J8 1336 aaKnown RBP12.62□□□□□ -0.39
PTMA-202ENST00000409115 IBTKQ9P2D0 1353 aaPredicted RBP12.62□□□□□ -0.39
PTMA-202ENST00000409115 SUSD4Q5VX71 490 aa12.62□□□□□ -0.39
PTMA-202ENST00000409115 GPC2Q8N158 579 aa12.62□□□□□ -0.39
PTMA-202ENST00000409115 RPGRQ92834 1020 aaKnown RBP12.62□□□□□ -0.39
PTMA-202ENST00000409115 ZNF428Q96B54 188 aa12.62□□□□□ -0.39
PTMA-202ENST00000409115 PSMD1Q99460 953 aa12.62□□□□□ -0.39
PTMA-202ENST00000409115 PSME4Q14997 1843 aa12.61□□□□□ -0.39
PTMA-202ENST00000409115 PPEF1O14829 653 aaPredicted RBP12.61□□□□□ -0.39
PTMA-202ENST00000409115 NTSR2O95665 410 aa12.61□□□□□ -0.39
PTMA-202ENST00000409115 ANXA1P04083 346 aa12.61□□□□□ -0.39
PTMA-202ENST00000409115 ALDH1B1P30837 517 aa12.61□□□□□ -0.39
PTMA-202ENST00000409115 EIF6P56537 245 aaKnown RBP12.61□□□□□ -0.39
PTMA-202ENST00000409115 KCNH2Q12809 1159 aa12.61□□□□□ -0.39
PTMA-202ENST00000409115 TAF7Q15545 349 aaPredicted RBP12.61□□□□□ -0.39
PTMA-202ENST00000409115 AOC3Q16853 763 aa12.61□□□□□ -0.39
PTMA-202ENST00000409115 DEFB115Q30KQ5 88 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms