RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 ARMT1Q9H993 441 aa5.75□□□□□ -1.49
SCN3A-203ENST00000409101 HELLSQ9NRZ9 838 aa5.75□□□□□ -1.49
SCN3A-203ENST00000409101 SPATA31A6Q5VVP1 1343 aa5.75□□□□□ -1.49
SCN3A-203ENST00000409101 MYCLP12524 364 aaPredicted RBP5.75□□□□□ -1.49
SCN3A-203ENST00000409101 SKIDA1Q1XH10 827 aa5.75□□□□□ -1.49
SCN3A-203ENST00000409101 KRT24Q2M2I5 525 aa5.75□□□□□ -1.49
SCN3A-203ENST00000409101 SPATA5Q8NB90 893 aa5.75□□□□□ -1.49
SCN3A-203ENST00000409101 FAM212AQ96EL1 285 aa5.75□□□□□ -1.49
SCN3A-203ENST00000409101 ZNF594Q96JF6 807 aaPredicted RBP5.75□□□□□ -1.49
SCN3A-203ENST00000409101 SYNCQ9H7C4 482 aa5.75□□□□□ -1.49
SCN3A-203ENST00000409101 WDR70Q9NW82 654 aa5.75□□□□□ -1.49
SCN3A-203ENST00000409101 PATL2C9JE40 543 aaKnown RBP5.74□□□□□ -1.49
SCN3A-203ENST00000409101 FAM13AO94988 1023 aa5.74□□□□□ -1.49
SCN3A-203ENST00000409101 CALML3P27482 149 aa5.74□□□□□ -1.49
SCN3A-203ENST00000409101 KRT2P35908 639 aa5.74□□□□□ -1.49
SCN3A-203ENST00000409101 SPA17Q15506 151 aa5.74□□□□□ -1.49
SCN3A-203ENST00000409101 MFSD14BQ5SR56 506 aa5.74□□□□□ -1.49
SCN3A-203ENST00000409101 CCDC117Q8IWD4 279 aaPredicted RBP5.74□□□□□ -1.49
SCN3A-203ENST00000409101 ANKRD44Q8N8A2 993 aa5.74□□□□□ -1.49
SCN3A-203ENST00000409101 AZI2Q9H6S1 392 aa5.74□□□□□ -1.49
SCN3A-203ENST00000409101 SBNO2Q9Y2G9 1366 aa5.74□□□□□ -1.49
SCN3A-203ENST00000409101 BLMP54132 1417 aaPredicted RBP5.74□□□□□ -1.49
SCN3A-203ENST00000409101 ALG1Q9BT22 464 aa5.74□□□□□ -1.49
SCN3A-203ENST00000409101 SCAND2PQ9GZW5 306 aaPredicted RBP5.74□□□□□ -1.49
SCN3A-203ENST00000409101 MMRN2Q9H8L6 949 aa5.74□□□□□ -1.49
SCN3A-203ENST00000409101 FAM135BQ49AJ0 1406 aa5.74□□□□□ -1.49
SCN3A-203ENST00000409101 ANKARQ7Z5J8 1434 aa5.74□□□□□ -1.49
SCN3A-203ENST00000409101 GJB2P29033 226 aa5.74□□□□□ -1.49
SCN3A-203ENST00000409101 GBP2P32456 591 aaPredicted RBP5.74□□□□□ -1.49
SCN3A-203ENST00000409101 ZRSR2Q15696 482 aaKnown RBP5.74□□□□□ -1.49
SCN3A-203ENST00000409101 TGFBRAP1Q8WUH2 860 aa5.74□□□□□ -1.49
SCN3A-203ENST00000409101 FERMT1Q9BQL6 677 aa5.74□□□□□ -1.49
SCN3A-203ENST00000409101 PABPN1LA6NDY0 278 aaKnown RBP5.74□□□□□ -1.49
SCN3A-203ENST00000409101 MTIF2P46199 727 aaKnown RBP5.74□□□□□ -1.49
SCN3A-203ENST00000409101 SETQ01105 290 aaPredicted RBP5.74□□□□□ -1.49
SCN3A-203ENST00000409101 GSE1Q14687 1217 aa5.74□□□□□ -1.49
SCN3A-203ENST00000409101 SUPT20HL1Q3ZLR7 823 aa5.74□□□□□ -1.49
SCN3A-203ENST00000409101 TNNI3KQ59H18 835 aa5.74□□□□□ -1.49
SCN3A-203ENST00000409101 KANK3Q6NY19 840 aa5.74□□□□□ -1.49
SCN3A-203ENST00000409101 MAPKAPK5Q8IW41 473 aa5.74□□□□□ -1.49
SCN3A-203ENST00000409101 IMPG2Q9BZV3 1241 aa5.74□□□□□ -1.49
SCN3A-203ENST00000409101 RMND1Q9NWS8 449 aa5.74□□□□□ -1.49
SCN3A-203ENST00000409101 FPGT-TNNI3KV9GXZ4 949 aa5.74□□□□□ -1.49
SCN3A-203ENST00000409101 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.74□□□□□ -1.49
SCN3A-203ENST00000409101 INSRP06213 1382 aa5.74□□□□□ -1.49
SCN3A-203ENST00000409101 STAT6P42226 847 aa5.74□□□□□ -1.49
SCN3A-203ENST00000409101 RBM25P49756 843 aaKnown RBP5.74□□□□□ -1.49
SCN3A-203ENST00000409101 MAP3K15Q6ZN16 1313 aa5.74□□□□□ -1.49
SCN3A-203ENST00000409101 TSPYL6Q8N831 410 aa5.74□□□□□ -1.49
SCN3A-203ENST00000409101 IL27Q8NEV9 243 aa5.74□□□□□ -1.49
SCN3A-203ENST00000409101 GJD4Q96KN9 370 aaPredicted RBP5.74□□□□□ -1.49
SCN3A-203ENST00000409101 ADGRL3Q9HAR2 1447 aa5.74□□□□□ -1.49
SCN3A-203ENST00000409101 ROBO2Q9HCK4 1378 aa5.74□□□□□ -1.49
SCN3A-203ENST00000409101 MAP3K4Q9Y6R4 1608 aa5.74□□□□□ -1.49
SCN3A-203ENST00000409101 ARAP3Q8WWN8 1544 aa5.73□□□□□ -1.49
SCN3A-203ENST00000409101 ZBTB7AO95365 584 aa5.73□□□□□ -1.49
SCN3A-203ENST00000409101 EIF4A1P60842 406 aaKnown RBP5.73□□□□□ -1.49
SCN3A-203ENST00000409101 BMS1Q14692 1282 aaKnown RBP5.73□□□□□ -1.49
SCN3A-203ENST00000409101 IQCEQ6IPM2 695 aa5.73□□□□□ -1.49
SCN3A-203ENST00000409101 TTLL6Q8N841 843 aa5.73□□□□□ -1.49
SCN3A-203ENST00000409101 BRF1Q92994 677 aa5.73□□□□□ -1.49
SCN3A-203ENST00000409101 LRRC45Q96CN5 670 aa5.73□□□□□ -1.49
SCN3A-203ENST00000409101 TESK2Q96S53 571 aa5.73□□□□□ -1.49
SCN3A-203ENST00000409101 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.73□□□□□ -1.49
SCN3A-203ENST00000409101 SPON1Q9HCB6 807 aa5.73□□□□□ -1.49
SCN3A-203ENST00000409101 HOMER2Q9NSB8 354 aa5.73□□□□□ -1.49
SCN3A-203ENST00000409101 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.73□□□□□ -1.49
SCN3A-203ENST00000409101 RIMBP3CA6NJZ7 1639 aa5.73□□□□□ -1.49
SCN3A-203ENST00000409101 RIMBP3BA6NNM3 1639 aa5.73□□□□□ -1.49
SCN3A-203ENST00000409101 RIMBP3Q9UFD9 1639 aa5.73□□□□□ -1.49
SCN3A-203ENST00000409101 XDHP47989 1333 aa5.73□□□□□ -1.49
SCN3A-203ENST00000409101 CCDC171Q6TFL3 1326 aa5.73□□□□□ -1.49
SCN3A-203ENST00000409101 DKC1O60832 514 aaKnown RBP eCLIP5.73□□□□□ -1.49
SCN3A-203ENST00000409101 VAMP4O75379 141 aa5.73□□□□□ -1.49
SCN3A-203ENST00000409101 NASPP49321 788 aaPredicted RBP5.73□□□□□ -1.49
SCN3A-203ENST00000409101 CAMK4Q16566 473 aa5.73□□□□□ -1.49
SCN3A-203ENST00000409101 C20orf194Q5TEA3 1177 aa5.73□□□□□ -1.49
SCN3A-203ENST00000409101 NBPF3Q9H094 633 aa5.73□□□□□ -1.49
SCN3A-203ENST00000409101 RBM8AQ9Y5S9 174 aaKnown RBP5.73□□□□□ -1.49
SCN3A-203ENST00000409101 PREX2Q70Z35 1606 aa5.73□□□□□ -1.49
SCN3A-203ENST00000409101 SPATA31A3Q5VYP0 1347 aa5.73□□□□□ -1.49
SCN3A-203ENST00000409101 NPR1P16066 1061 aa5.73□□□□□ -1.49
SCN3A-203ENST00000409101 SCNN1DP51172 638 aa5.73□□□□□ -1.49
SCN3A-203ENST00000409101 EN1Q05925 392 aaPredicted RBP5.73□□□□□ -1.49
SCN3A-203ENST00000409101 MAP3K11Q16584 847 aa5.73□□□□□ -1.49
SCN3A-203ENST00000409101 KRT79Q5XKE5 535 aa5.73□□□□□ -1.49
SCN3A-203ENST00000409101 EP400NLQ6ZTU2 488 aa5.73□□□□□ -1.49
SCN3A-203ENST00000409101 Q6ZUG5 572 aa5.73□□□□□ -1.49
SCN3A-203ENST00000409101 TRAK2O60296 914 aa5.73□□□□□ -1.49
SCN3A-203ENST00000409101 PRKCSHP14314 528 aaPredicted RBP5.73□□□□□ -1.49
SCN3A-203ENST00000409101 CTNNA2P26232 953 aa5.73□□□□□ -1.49
SCN3A-203ENST00000409101 SSFA2P28290 1259 aa5.73□□□□□ -1.49
SCN3A-203ENST00000409101 SLC1A4P43007 532 aa5.73□□□□□ -1.49
SCN3A-203ENST00000409101 CCNA1P78396 465 aa5.73□□□□□ -1.49
SCN3A-203ENST00000409101 SLC27A3Q5K4L6 730 aa5.73□□□□□ -1.49
SCN3A-203ENST00000409101 KIAA0825Q8IV33 1275 aa5.73□□□□□ -1.49
SCN3A-203ENST00000409101 C2orf69Q8N8R5 385 aa5.73□□□□□ -1.49
SCN3A-203ENST00000409101 SPC24Q8NBT2 197 aa5.73□□□□□ -1.49
SCN3A-203ENST00000409101 LARP6Q9BRS8 491 aaKnown RBP5.73□□□□□ -1.49
SCN3A-203ENST00000409101 GLT8D2Q9H1C3 349 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms