RNA–Protein interactions for RNA: ENST00000400183.6

USP25-204, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-204ENST00000400183 MIGA1Q8NAN2 632 aa20.97■□□□□ 0.95
USP25-204ENST00000400183 CHST3Q7LGC8 479 aa20.96■□□□□ 0.95
USP25-204ENST00000400183 NSFL1CQ9UNZ2 370 aaKnown RBP20.96■□□□□ 0.95
USP25-204ENST00000400183 RIMS2Q9UQ26 1411 aa20.96■□□□□ 0.95
USP25-204ENST00000400183 TSPYL6Q8N831 410 aa20.96■□□□□ 0.95
USP25-204ENST00000400183 RGS22Q8NE09 1264 aa20.96■□□□□ 0.95
USP25-204ENST00000400183 FAM13AO94988 1023 aa20.96■□□□□ 0.95
USP25-204ENST00000400183 HELBQ8NG08 1087 aaPredicted RBP20.96■□□□□ 0.95
USP25-204ENST00000400183 ANKRD2Q9GZV1 360 aa20.96■□□□□ 0.95
USP25-204ENST00000400183 TOM1O60784 492 aa20.96■□□□□ 0.95
USP25-204ENST00000400183 ZRANB1Q9UGI0 708 aa20.96■□□□□ 0.95
USP25-204ENST00000400183 PLCH2O75038 1416 aa20.95■□□□□ 0.94
USP25-204ENST00000400183 FBF1Q8TES7 1133 aa20.95■□□□□ 0.94
USP25-204ENST00000400183 SSX2IPQ9Y2D8 614 aa20.95■□□□□ 0.94
USP25-204ENST00000400183 ATP2A1O14983 1001 aa20.95■□□□□ 0.94
USP25-204ENST00000400183 RUFY3Q7L099 469 aa20.95■□□□□ 0.94
USP25-204ENST00000400183 RRAGDQ9NQL2 400 aaPredicted RBP20.95■□□□□ 0.94
USP25-204ENST00000400183 ZBTB40Q9NUA8 1239 aa20.95■□□□□ 0.94
USP25-204ENST00000400183 ARID5AQ03989 594 aa20.95■□□□□ 0.94
USP25-204ENST00000400183 GRIPAP1Q4V328 841 aa20.95■□□□□ 0.94
USP25-204ENST00000400183 SMC5Q8IY18 1101 aa20.95■□□□□ 0.94
USP25-204ENST00000400183 NSRP1Q9H0G5 558 aaKnown RBP20.95■□□□□ 0.94
USP25-204ENST00000400183 RTCBQ9Y3I0 505 aaKnown RBP20.95■□□□□ 0.94
USP25-204ENST00000400183 DTHD1Q6ZMT9 781 aa20.94■□□□□ 0.94
USP25-204ENST00000400183 IQUBQ8NA54 791 aa20.94■□□□□ 0.94
USP25-204ENST00000400183 NEK11Q8NG66 645 aa20.94■□□□□ 0.94
USP25-204ENST00000400183 PSMD1Q99460 953 aa20.94■□□□□ 0.94
USP25-204ENST00000400183 URB2Q14146 1524 aaKnown RBP20.94■□□□□ 0.94
USP25-204ENST00000400183 CHMLP26374 656 aa20.94■□□□□ 0.94
USP25-204ENST00000400183 MCM6Q14566 821 aa20.94■□□□□ 0.94
USP25-204ENST00000400183 OPA1O60313 960 aa20.94■□□□□ 0.94
USP25-204ENST00000400183 SLU7O95391 586 aaKnown RBP20.94■□□□□ 0.94
USP25-204ENST00000400183 TICAM2Q86XR7 235 aa20.94■□□□□ 0.94
USP25-204ENST00000400183 LDHBP07195 334 aaKnown RBP20.94■□□□□ 0.94
USP25-204ENST00000400183 PLEKHM2Q8IWE5 1019 aa20.94■□□□□ 0.94
USP25-204ENST00000400183 NPATQ14207 1427 aa20.93■□□□□ 0.94
USP25-204ENST00000400183 CCDC94Q9BW85 323 aaPredicted RBP20.93■□□□□ 0.94
USP25-204ENST00000400183 DUOX2Q9NRD8 1548 aa20.93■□□□□ 0.94
USP25-204ENST00000400183 PRAG1Q86YV5 1406 aa20.93■□□□□ 0.94
USP25-204ENST00000400183 MCM7P33993 719 aa20.93■□□□□ 0.94
USP25-204ENST00000400183 PRIM1P49642 420 aaKnown RBP20.93■□□□□ 0.94
USP25-204ENST00000400183 RAB3GAP1Q15042 981 aa20.93■□□□□ 0.94
USP25-204ENST00000400183 VEZTQ9HBM0 779 aa20.93■□□□□ 0.94
USP25-204ENST00000400183 STX17P56962 302 aa20.93■□□□□ 0.94
USP25-204ENST00000400183 UBXN1Q04323 297 aa20.93■□□□□ 0.94
USP25-204ENST00000400183 GPATCH11Q8N954 259 aa20.93■□□□□ 0.94
USP25-204ENST00000400183 STMN4Q9H169 189 aaPredicted RBP20.93■□□□□ 0.94
USP25-204ENST00000400183 A2MP01023 1474 aa20.92■□□□□ 0.94
USP25-204ENST00000400183 TUBB4BP68371 445 aa20.92■□□□□ 0.94
USP25-204ENST00000400183 ATL3Q6DD88 541 aa20.92■□□□□ 0.94
USP25-204ENST00000400183 EYA1Q99502 592 aa20.92■□□□□ 0.94
USP25-204ENST00000400183 RLBP1P12271 317 aa20.92■□□□□ 0.94
USP25-204ENST00000400183 THOC2Q8NI27 1593 aaKnown RBP20.92■□□□□ 0.94
USP25-204ENST00000400183 RBM28Q9NW13 759 aaKnown RBP20.92■□□□□ 0.94
USP25-204ENST00000400183 GOLGA1Q92805 767 aa20.92■□□□□ 0.94
USP25-204ENST00000400183 KRT24Q2M2I5 525 aa20.92■□□□□ 0.94
USP25-204ENST00000400183 TNNQ9UQP3 1299 aa20.91■□□□□ 0.94
USP25-204ENST00000400183 EEF2P13639 858 aaKnown RBP20.91■□□□□ 0.94
USP25-204ENST00000400183 HSPA4P34932 840 aa20.91■□□□□ 0.94
USP25-204ENST00000400183 EYA3Q99504 573 aa20.91■□□□□ 0.94
USP25-204ENST00000400183 NCBP1Q09161 790 aaKnown RBP20.91■□□□□ 0.94
USP25-204ENST00000400183 CABLES1Q8TDN4 633 aa20.91■□□□□ 0.94
USP25-204ENST00000400183 ZFYVE9O95405 1425 aa20.91■□□□□ 0.94
USP25-204ENST00000400183 HS1BP3Q53T59 392 aa20.91■□□□□ 0.94
USP25-204ENST00000400183 DDX21Q9NR30 783 aaKnown RBP eCLIP20.91■□□□□ 0.94
USP25-204ENST00000400183 HELLSQ9NRZ9 838 aa20.91■□□□□ 0.94
USP25-204ENST00000400183 BICC1Q9H694 974 aaKnown RBP20.91■□□□□ 0.94
USP25-204ENST00000400183 GCP02774 474 aa20.9■□□□□ 0.94
USP25-204ENST00000400183 TTC6Q86TZ1 520 aa20.9■□□□□ 0.94
USP25-204ENST00000400183 LUC7L2Q9Y383 392 aaKnown RBP20.9■□□□□ 0.94
USP25-204ENST00000400183 KIF4AO95239 1232 aa20.9■□□□□ 0.94
USP25-204ENST00000400183 GSTA5Q7RTV2 222 aa20.9■□□□□ 0.94
USP25-204ENST00000400183 NAP1L4Q99733 375 aaKnown RBP20.9■□□□□ 0.94
USP25-204ENST00000400183 GJC1P36383 396 aa20.9■□□□□ 0.94
USP25-204ENST00000400183 PLCB3Q01970 1234 aa20.9■□□□□ 0.94
USP25-204ENST00000400183 ZFP91Q96JP5 570 aaPredicted RBP20.9■□□□□ 0.94
USP25-204ENST00000400183 WDR7Q9Y4E6 1490 aa20.9■□□□□ 0.94
USP25-204ENST00000400183 ZNF354CQ86Y25 554 aa20.9■□□□□ 0.94
USP25-204ENST00000400183 C19orf44Q9H6X5 657 aa20.9■□□□□ 0.94
USP25-204ENST00000400183 PHACTR3Q96KR7 559 aa20.89■□□□□ 0.94
USP25-204ENST00000400183 C8orf37Q96NL8 207 aa20.89■□□□□ 0.94
USP25-204ENST00000400183 PAIP2Q9BPZ3 127 aaKnown RBP20.89■□□□□ 0.94
USP25-204ENST00000400183 IFNKQ9P0W0 207 aa20.89■□□□□ 0.94
USP25-204ENST00000400183 UBAP1LF5GYI3 381 aa20.89■□□□□ 0.93
USP25-204ENST00000400183 RNMTO43148 476 aaKnown RBP20.89■□□□□ 0.93
USP25-204ENST00000400183 IPO4Q8TEX9 1081 aaKnown RBP20.89■□□□□ 0.93
USP25-204ENST00000400183 ATRIPQ8WXE1 791 aa20.89■□□□□ 0.93
USP25-204ENST00000400183 GUCA1BQ9UMX6 200 aa20.89■□□□□ 0.93
USP25-204ENST00000400183 ATP2C2O75185 946 aa20.89■□□□□ 0.93
USP25-204ENST00000400183 PLS1Q14651 629 aa20.89■□□□□ 0.93
USP25-204ENST00000400183 MSANTD4Q8NCY6 345 aa20.88■□□□□ 0.93
USP25-204ENST00000400183 RXRAP19793 462 aa20.88■□□□□ 0.93
USP25-204ENST00000400183 RPL13P26373 211 aaKnown RBP20.88■□□□□ 0.93
USP25-204ENST00000400183 JDP2Q8WYK2 163 aa20.88■□□□□ 0.93
USP25-204ENST00000400183 TTC14Q96N46 770 aa20.88■□□□□ 0.93
USP25-204ENST00000400183 USP26Q9BXU7 913 aa20.88■□□□□ 0.93
USP25-204ENST00000400183 DENND2AQ9ULE3 1009 aa20.88■□□□□ 0.93
USP25-204ENST00000400183 PARP3Q9Y6F1 533 aa20.88■□□□□ 0.93
USP25-204ENST00000400183 PCDH11XQ9BZA7 1347 aa20.88■□□□□ 0.93
USP25-204ENST00000400183 PCDH11YQ9BZA8 1340 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms