RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 MCMDC2Q4G0Z9 681 aa13.87□□□□□ -0.19
CACNA1C-219ENST00000399649 GUCA1BQ9UMX6 200 aa13.87□□□□□ -0.19
CACNA1C-219ENST00000399649 ZEB2O60315 1214 aa13.87□□□□□ -0.19
CACNA1C-219ENST00000399649 FYB2Q5VWT5 728 aa13.87□□□□□ -0.19
CACNA1C-219ENST00000399649 PPP1R21Q6ZMI0 780 aa13.87□□□□□ -0.19
CACNA1C-219ENST00000399649 GPR161Q8N6U8 529 aaKnown RBP13.87□□□□□ -0.19
CACNA1C-219ENST00000399649 KIFAP3Q92845 792 aa13.87□□□□□ -0.19
CACNA1C-219ENST00000399649 KIFC2Q96AC6 838 aa13.87□□□□□ -0.19
CACNA1C-219ENST00000399649 SETDB2Q96T68 719 aa13.87□□□□□ -0.19
CACNA1C-219ENST00000399649 CSRNP2Q9H175 543 aa13.87□□□□□ -0.19
CACNA1C-219ENST00000399649 TMX3Q96JJ7 454 aa13.86□□□□□ -0.19
CACNA1C-219ENST00000399649 NKIRAS1Q9NYS0 192 aa13.86□□□□□ -0.19
CACNA1C-219ENST00000399649 CLUL1Q15846 466 aa13.86□□□□□ -0.19
CACNA1C-219ENST00000399649 ZNF569Q5MCW4 686 aa13.86□□□□□ -0.19
CACNA1C-219ENST00000399649 TSHZ3Q63HK5 1081 aa13.86□□□□□ -0.19
CACNA1C-219ENST00000399649 USP48Q86UV5 1035 aa13.86□□□□□ -0.19
CACNA1C-219ENST00000399649 FAM204AQ9H8W3 233 aa13.86□□□□□ -0.19
CACNA1C-219ENST00000399649 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.86□□□□□ -0.19
CACNA1C-219ENST00000399649 CLGNO14967 610 aa13.86□□□□□ -0.19
CACNA1C-219ENST00000399649 VAV2P52735 878 aa13.86□□□□□ -0.19
CACNA1C-219ENST00000399649 AFAP1L2Q8N4X5 818 aa13.86□□□□□ -0.19
CACNA1C-219ENST00000399649 ARFGAP2Q8N6H7 521 aa13.86□□□□□ -0.19
CACNA1C-219ENST00000399649 TLDC2A0PJX2 215 aa13.86□□□□□ -0.19
CACNA1C-219ENST00000399649 TRIM27P14373 513 aa13.86□□□□□ -0.19
CACNA1C-219ENST00000399649 CCDC26Q8TAB7 109 aa13.86□□□□□ -0.19
CACNA1C-219ENST00000399649 PPP1R9BQ96SB3 815 aa13.86□□□□□ -0.19
CACNA1C-219ENST00000399649 LRRC2Q9BYS8 371 aa13.86□□□□□ -0.19
CACNA1C-219ENST00000399649 FEZ2Q9UHY8 353 aaPredicted RBP13.86□□□□□ -0.19
CACNA1C-219ENST00000399649 FRMD4BQ9Y2L6 1034 aa13.86□□□□□ -0.19
CACNA1C-219ENST00000399649 WDR44Q5JSH3 913 aa13.86□□□□□ -0.19
CACNA1C-219ENST00000399649 SIRT1Q96EB6 747 aa13.86□□□□□ -0.19
CACNA1C-219ENST00000399649 TRIM75PA6NK02 468 aa13.85□□□□□ -0.19
CACNA1C-219ENST00000399649 CCDC186Q7Z3E2 898 aa13.85□□□□□ -0.19
CACNA1C-219ENST00000399649 PROCA1Q8NCQ7 364 aaPredicted RBP13.85□□□□□ -0.19
CACNA1C-219ENST00000399649 RNF34Q969K3 372 aa13.85□□□□□ -0.19
CACNA1C-219ENST00000399649 KARSQ15046 597 aaKnown RBP13.85□□□□□ -0.19
CACNA1C-219ENST00000399649 FAM76AQ8TAV0 307 aa13.85□□□□□ -0.19
CACNA1C-219ENST00000399649 FAM200AQ8TCP9 573 aa13.85□□□□□ -0.19
CACNA1C-219ENST00000399649 MIPOL1Q8TD10 442 aa13.85□□□□□ -0.19
CACNA1C-219ENST00000399649 NAP1L4Q99733 375 aaKnown RBP13.85□□□□□ -0.19
CACNA1C-219ENST00000399649 DNAJC25Q9H1X3 360 aa13.85□□□□□ -0.19
CACNA1C-219ENST00000399649 EMILIN1Q9Y6C2 1016 aa13.85□□□□□ -0.19
CACNA1C-219ENST00000399649 CASQ2O14958 399 aaPredicted RBP13.85□□□□□ -0.19
CACNA1C-219ENST00000399649 GNAT2P19087 354 aa13.85□□□□□ -0.19
CACNA1C-219ENST00000399649 DCAF17Q5H9S7 520 aaPredicted RBP13.85□□□□□ -0.19
CACNA1C-219ENST00000399649 KRT28Q7Z3Y7 464 aa13.85□□□□□ -0.19
CACNA1C-219ENST00000399649 JARID2Q92833 1246 aaPredicted RBP13.85□□□□□ -0.19
CACNA1C-219ENST00000399649 MCM7P33993 719 aa13.85□□□□□ -0.19
CACNA1C-219ENST00000399649 SEPT14Q6ZU15 432 aa13.85□□□□□ -0.19
CACNA1C-219ENST00000399649 VEZTQ9HBM0 779 aa13.85□□□□□ -0.19
CACNA1C-219ENST00000399649 AMOTL2Q9Y2J4 779 aa13.85□□□□□ -0.19
CACNA1C-219ENST00000399649 TACC3Q9Y6A5 838 aa13.85□□□□□ -0.19
CACNA1C-219ENST00000399649 RAPGEF1Q13905 1077 aa13.85□□□□□ -0.19
CACNA1C-219ENST00000399649 C20orf194Q5TEA3 1177 aa13.85□□□□□ -0.19
CACNA1C-219ENST00000399649 ERCC5P28715 1186 aaPredicted RBP13.84□□□□□ -0.19
CACNA1C-219ENST00000399649 SLC8A3P57103 927 aa13.84□□□□□ -0.19
CACNA1C-219ENST00000399649 DNAJC21Q5F1R6 531 aaKnown RBP13.84□□□□□ -0.19
CACNA1C-219ENST00000399649 EPB41P11171 864 aaKnown RBP13.84□□□□□ -0.19
CACNA1C-219ENST00000399649 TNNI2P48788 182 aa13.84□□□□□ -0.19
CACNA1C-219ENST00000399649 ATP2B3Q16720 1220 aa13.84□□□□□ -0.19
CACNA1C-219ENST00000399649 GABPB2Q8TAK5 448 aaPredicted RBP13.84□□□□□ -0.19
CACNA1C-219ENST00000399649 PI4KAP2A4QPH2 592 aa13.84□□□□□ -0.19
CACNA1C-219ENST00000399649 GBP1P32455 592 aa13.84□□□□□ -0.19
CACNA1C-219ENST00000399649 ITIH3Q06033 890 aa13.84□□□□□ -0.19
CACNA1C-219ENST00000399649 PI4KAP1Q8N8J0 262 aa13.84□□□□□ -0.19
CACNA1C-219ENST00000399649 STK10O94804 968 aaKnown RBP13.84□□□□□ -0.19
CACNA1C-219ENST00000399649 CUL4BQ13620 913 aa13.84□□□□□ -0.19
CACNA1C-219ENST00000399649 NAA25Q14CX7 972 aa13.84□□□□□ -0.19
CACNA1C-219ENST00000399649 CACNA2D3Q8IZS8 1091 aa13.84□□□□□ -0.19
CACNA1C-219ENST00000399649 RBM8AQ9Y5S9 174 aaKnown RBP13.84□□□□□ -0.19
CACNA1C-219ENST00000399649 RHOXF2BP0C7M4 288 aa13.84□□□□□ -0.19
CACNA1C-219ENST00000399649 HSPA1LP34931 641 aa13.84□□□□□ -0.19
CACNA1C-219ENST00000399649 IFT74Q96LB3 600 aa13.84□□□□□ -0.19
CACNA1C-219ENST00000399649 RHOXF2Q9BQY4 288 aa13.84□□□□□ -0.19
CACNA1C-219ENST00000399649 CACYBPQ9HB71 228 aaKnown RBP13.84□□□□□ -0.19
CACNA1C-219ENST00000399649 STX10O60499 249 aa13.83□□□□□ -0.19
CACNA1C-219ENST00000399649 NYXQ9GZU5 481 aa13.83□□□□□ -0.19
CACNA1C-219ENST00000399649 SPTLC2O15270 562 aa13.83□□□□□ -0.2
CACNA1C-219ENST00000399649 RPL13P26373 211 aaKnown RBP13.83□□□□□ -0.2
CACNA1C-219ENST00000399649 TBC1D31Q96DN5 1066 aa13.83□□□□□ -0.2
CACNA1C-219ENST00000399649 VCX3BQ9H321 246 aa13.83□□□□□ -0.2
CACNA1C-219ENST00000399649 ANKRD13DQ6ZTN6 518 aa13.83□□□□□ -0.2
CACNA1C-219ENST00000399649 RHPN1Q8TCX5 695 aa13.83□□□□□ -0.2
CACNA1C-219ENST00000399649 VIMP08670 466 aaKnown RBP13.83□□□□□ -0.2
CACNA1C-219ENST00000399649 KRT9P35527 623 aa13.83□□□□□ -0.2
CACNA1C-219ENST00000399649 NEDD9Q14511 834 aa13.83□□□□□ -0.2
CACNA1C-219ENST00000399649 GKAP1Q5VSY0 366 aaPredicted RBP13.83□□□□□ -0.2
CACNA1C-219ENST00000399649 DTHD1Q6ZMT9 781 aa13.83□□□□□ -0.2
CACNA1C-219ENST00000399649 FNBP1Q96RU3 617 aa13.83□□□□□ -0.2
CACNA1C-219ENST00000399649 LZTFL1Q9NQ48 299 aa13.83□□□□□ -0.2
CACNA1C-219ENST00000399649 KIF14Q15058 1648 aa13.83□□□□□ -0.2
CACNA1C-219ENST00000399649 PLCG2P16885 1265 aa13.83□□□□□ -0.2
CACNA1C-219ENST00000399649 GABPAQ06546 454 aa13.83□□□□□ -0.2
CACNA1C-219ENST00000399649 RBM28Q9NW13 759 aaKnown RBP13.82□□□□□ -0.2
CACNA1C-219ENST00000399649 BACH1O14867 736 aa13.82□□□□□ -0.2
CACNA1C-219ENST00000399649 DAPK3O43293 454 aa13.82□□□□□ -0.2
CACNA1C-219ENST00000399649 GNA11P29992 359 aa13.82□□□□□ -0.2
CACNA1C-219ENST00000399649 ATP6V1AP38606 617 aa13.82□□□□□ -0.2
CACNA1C-219ENST00000399649 HDXQ7Z353 690 aa13.82□□□□□ -0.2
CACNA1C-219ENST00000399649 F13A1P00488 732 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms