RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 TAGLN3Q9UI15 199 aa7.45□□□□□ -1.22
TRAPPC13-202ENST00000399438 XRN1Q8IZH2 1706 aaKnown RBP7.45□□□□□ -1.22
TRAPPC13-202ENST00000399438 YTHDC2Q9H6S0 1430 aaKnown RBP7.45□□□□□ -1.22
TRAPPC13-202ENST00000399438 SLC26A4O43511 780 aa7.45□□□□□ -1.22
TRAPPC13-202ENST00000399438 ABCB7O75027 752 aa7.45□□□□□ -1.22
TRAPPC13-202ENST00000399438 HSPA2P54652 639 aa7.45□□□□□ -1.22
TRAPPC13-202ENST00000399438 NFKBIBQ15653 356 aa7.45□□□□□ -1.22
TRAPPC13-202ENST00000399438 CCDC92Q53HC0 331 aaPredicted RBP7.45□□□□□ -1.22
TRAPPC13-202ENST00000399438 LARP1BQ659C4 914 aaKnown RBP7.45□□□□□ -1.22
TRAPPC13-202ENST00000399438 CPS1P31327 1500 aa7.45□□□□□ -1.22
TRAPPC13-202ENST00000399438 TULP4Q9NRJ4 1543 aa7.45□□□□□ -1.22
TRAPPC13-202ENST00000399438 TECPR2O15040 1411 aa7.45□□□□□ -1.22
TRAPPC13-202ENST00000399438 POLR3AO14802 1390 aaPredicted RBP7.45□□□□□ -1.22
TRAPPC13-202ENST00000399438 SYNRGQ9UMZ2 1314 aa7.45□□□□□ -1.22
TRAPPC13-202ENST00000399438 MTA2O94776 668 aa7.44□□□□□ -1.22
TRAPPC13-202ENST00000399438 ATF4P18848 351 aaPredicted RBP7.44□□□□□ -1.22
TRAPPC13-202ENST00000399438 Q3C1V9 767 aa7.44□□□□□ -1.22
TRAPPC13-202ENST00000399438 HDGFL2Q7Z4V5 671 aaPredicted RBP7.44□□□□□ -1.22
TRAPPC13-202ENST00000399438 PIK3R4Q99570 1358 aa7.44□□□□□ -1.22
TRAPPC13-202ENST00000399438 NWD1Q149M9 1564 aa7.44□□□□□ -1.22
TRAPPC13-202ENST00000399438 ALDH1L1O75891 902 aa7.44□□□□□ -1.22
TRAPPC13-202ENST00000399438 GRAMD1BQ3KR37 738 aa7.44□□□□□ -1.22
TRAPPC13-202ENST00000399438 NBPF6Q5VWK0 638 aa7.44□□□□□ -1.22
TRAPPC13-202ENST00000399438 ZNF513Q8N8E2 541 aaPredicted RBP7.44□□□□□ -1.22
TRAPPC13-202ENST00000399438 SH3TC2Q8TF17 1288 aa7.44□□□□□ -1.22
TRAPPC13-202ENST00000399438 NBPF4Q96M43 638 aa7.44□□□□□ -1.22
TRAPPC13-202ENST00000399438 SRPK1Q96SB4 655 aaKnown RBP7.44□□□□□ -1.22
TRAPPC13-202ENST00000399438 CDHR5Q9HBB8 845 aa7.44□□□□□ -1.22
TRAPPC13-202ENST00000399438 SRA1Q9HD15 236 aaKnown RBP7.44□□□□□ -1.22
TRAPPC13-202ENST00000399438 ISY1Q9ULR0 285 aaKnown RBP7.44□□□□□ -1.22
TRAPPC13-202ENST00000399438 GJA3Q9Y6H8 435 aa7.44□□□□□ -1.22
TRAPPC13-202ENST00000399438 PTPRUQ92729 1446 aa7.44□□□□□ -1.22
TRAPPC13-202ENST00000399438 RPAINQ86UA6 219 aa7.44□□□□□ -1.22
TRAPPC13-202ENST00000399438 DZIP1LQ8IYY4 767 aaKnown RBP7.44□□□□□ -1.22
TRAPPC13-202ENST00000399438 POLKQ9UBT6 870 aa7.44□□□□□ -1.22
TRAPPC13-202ENST00000399438 CHD2O14647 1828 aaKnown RBP7.44□□□□□ -1.22
TRAPPC13-202ENST00000399438 APPP05067 770 aa7.43□□□□□ -1.22
TRAPPC13-202ENST00000399438 CLK1P49759 484 aaKnown RBP7.43□□□□□ -1.22
TRAPPC13-202ENST00000399438 MTMR3Q13615 1198 aa7.43□□□□□ -1.22
TRAPPC13-202ENST00000399438 CABLES1Q8TDN4 633 aa7.43□□□□□ -1.22
TRAPPC13-202ENST00000399438 LTV1Q96GA3 475 aaPredicted RBP7.43□□□□□ -1.22
TRAPPC13-202ENST00000399438 TTC14Q96N46 770 aa7.43□□□□□ -1.22
TRAPPC13-202ENST00000399438 VTI1BQ9UEU0 232 aa7.43□□□□□ -1.22
TRAPPC13-202ENST00000399438 ANKRD36BQ8N2N9 1353 aa7.43□□□□□ -1.22
TRAPPC13-202ENST00000399438 ABCC11Q96J66 1382 aa7.43□□□□□ -1.22
TRAPPC13-202ENST00000399438 FAM221BA6H8Z2 402 aa7.43□□□□□ -1.22
TRAPPC13-202ENST00000399438 MYL3P08590 195 aa7.43□□□□□ -1.22
TRAPPC13-202ENST00000399438 TTF1Q15361 905 aaPredicted RBP7.43□□□□□ -1.22
TRAPPC13-202ENST00000399438 OCLNQ16625 522 aa7.43□□□□□ -1.22
TRAPPC13-202ENST00000399438 ARMC3Q5W041 872 aa7.43□□□□□ -1.22
TRAPPC13-202ENST00000399438 NYAP1Q6ZVC0 841 aa7.43□□□□□ -1.22
TRAPPC13-202ENST00000399438 SERINC2Q96SA4 455 aa7.43□□□□□ -1.22
TRAPPC13-202ENST00000399438 CXorf56Q9H5V9 222 aa7.43□□□□□ -1.22
TRAPPC13-202ENST00000399438 LGR6Q9HBX8 967 aa7.43□□□□□ -1.22
TRAPPC13-202ENST00000399438 SNTG2Q9NY99 539 aa7.43□□□□□ -1.22
TRAPPC13-202ENST00000399438 QRICH2Q9H0J4 1663 aa7.43□□□□□ -1.22
TRAPPC13-202ENST00000399438 TREHO43280 583 aa7.42□□□□□ -1.22
TRAPPC13-202ENST00000399438 SCGB1D2O95969 90 aa7.42□□□□□ -1.22
TRAPPC13-202ENST00000399438 RASA3Q14644 834 aa7.42□□□□□ -1.22
TRAPPC13-202ENST00000399438 SWI5Q1ZZU3 235 aa7.42□□□□□ -1.22
TRAPPC13-202ENST00000399438 ARSHQ5FYA8 562 aa7.42□□□□□ -1.22
TRAPPC13-202ENST00000399438 MCM10Q7L590 875 aa7.42□□□□□ -1.22
TRAPPC13-202ENST00000399438 PLEKHM2Q8IWE5 1019 aa7.42□□□□□ -1.22
TRAPPC13-202ENST00000399438 CKAP2LQ8IYA6 745 aa7.42□□□□□ -1.22
TRAPPC13-202ENST00000399438 DEPDC4Q8N2C3 294 aa7.42□□□□□ -1.22
TRAPPC13-202ENST00000399438 DNMT3AQ9Y6K1 912 aaPredicted RBP7.42□□□□□ -1.22
TRAPPC13-202ENST00000399438 MOXD2PA6NHM9 499 aa7.42□□□□□ -1.22
TRAPPC13-202ENST00000399438 RASA1P20936 1047 aa7.42□□□□□ -1.22
TRAPPC13-202ENST00000399438 CTDSPL2Q05D32 466 aa7.42□□□□□ -1.22
TRAPPC13-202ENST00000399438 PLEKHF1Q96S99 279 aa7.42□□□□□ -1.22
TRAPPC13-202ENST00000399438 HDAC9Q9UKV0 1011 aa7.42□□□□□ -1.22
TRAPPC13-202ENST00000399438 PTCH1Q13635 1447 aa7.42□□□□□ -1.22
TRAPPC13-202ENST00000399438 PRPF40AO75400 957 aaKnown RBP7.42□□□□□ -1.22
TRAPPC13-202ENST00000399438 FLT3P36888 993 aa7.42□□□□□ -1.22
TRAPPC13-202ENST00000399438 GJA8P48165 433 aa7.42□□□□□ -1.22
TRAPPC13-202ENST00000399438 MVPQ14764 893 aaKnown RBP7.42□□□□□ -1.22
TRAPPC13-202ENST00000399438 ZNF654Q8IZM8 581 aa7.42□□□□□ -1.22
TRAPPC13-202ENST00000399438 USP19O94966 1318 aa7.41□□□□□ -1.22
TRAPPC13-202ENST00000399438 FAM135BQ49AJ0 1406 aa7.41□□□□□ -1.22
TRAPPC13-202ENST00000399438 ESYT3A0FGR9 886 aa7.41□□□□□ -1.22
TRAPPC13-202ENST00000399438 SMAPO00193 183 aa7.41□□□□□ -1.22
TRAPPC13-202ENST00000399438 FOXO3O43524 673 aa7.41□□□□□ -1.22
TRAPPC13-202ENST00000399438 CASP2P42575 452 aa7.41□□□□□ -1.22
TRAPPC13-202ENST00000399438 PSMD2Q13200 908 aa7.41□□□□□ -1.22
TRAPPC13-202ENST00000399438 TOMM20Q15388 145 aa7.41□□□□□ -1.22
TRAPPC13-202ENST00000399438 FAM83BQ5T0W9 1011 aa7.41□□□□□ -1.22
TRAPPC13-202ENST00000399438 ACAD8Q9UKU7 415 aa7.41□□□□□ -1.22
TRAPPC13-202ENST00000399438 NPC1L1Q9UHC9 1359 aa7.41□□□□□ -1.22
TRAPPC13-202ENST00000399438 SHTN1A0MZ66 631 aa7.41□□□□□ -1.22
TRAPPC13-202ENST00000399438 USP17L5A8MUK1 530 aa7.41□□□□□ -1.22
TRAPPC13-202ENST00000399438 LDHBP07195 334 aaKnown RBP7.41□□□□□ -1.22
TRAPPC13-202ENST00000399438 EPHB1P54762 984 aa7.41□□□□□ -1.22
TRAPPC13-202ENST00000399438 PDE3AQ14432 1141 aa7.41□□□□□ -1.22
TRAPPC13-202ENST00000399438 RELL1Q8IUW5 271 aa7.41□□□□□ -1.22
TRAPPC13-202ENST00000399438 SPICE1Q8N0Z3 855 aa7.41□□□□□ -1.22
TRAPPC13-202ENST00000399438 NUDT16Q96DE0 195 aaKnown RBP7.41□□□□□ -1.22
TRAPPC13-202ENST00000399438 LUZP4Q9P127 313 aa7.41□□□□□ -1.22
TRAPPC13-202ENST00000399438 PRRT4C9JH25 899 aa7.4□□□□□ -1.22
TRAPPC13-202ENST00000399438 ANKMY2Q8IV38 441 aa7.4□□□□□ -1.22
TRAPPC13-202ENST00000399438 C8orf58Q8NAV2 365 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms