RNA–Protein interactions for RNA: ENST00000399408.6

ABCC1-201, Transcript of ATP binding cassette subfamily C member 1, humanhuman

TSL 5 BASIC

Gene ABCC1, Length 6,594 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC1-201ENST00000399408 MACROD2A1Z1Q3 448 aa17.43■□□□□ 0.38
ABCC1-201ENST00000399408 DYNC1I1O14576 645 aa17.43■□□□□ 0.38
ABCC1-201ENST00000399408 MBD4O95243 580 aa17.43■□□□□ 0.38
ABCC1-201ENST00000399408 CPA1P15085 419 aa17.43■□□□□ 0.38
ABCC1-201ENST00000399408 TIMM10P62072 90 aa17.43■□□□□ 0.38
ABCC1-201ENST00000399408 DBNDD2Q9BQY9 259 aa17.43■□□□□ 0.38
ABCC1-201ENST00000399408 GOPCQ9HD26 462 aa17.43■□□□□ 0.38
ABCC1-201ENST00000399408 ARHGEF10O15013 1369 aa17.43■□□□□ 0.38
ABCC1-201ENST00000399408 LDHBP07195 334 aaKnown RBP17.43■□□□□ 0.38
ABCC1-201ENST00000399408 SPAG5Q96R06 1193 aa17.43■□□□□ 0.38
ABCC1-201ENST00000399408 ZC3H12CQ9C0D7 883 aaKnown RBP17.43■□□□□ 0.38
ABCC1-201ENST00000399408 ZKSCAN5Q9Y2L8 839 aa17.43■□□□□ 0.38
ABCC1-201ENST00000399408 CCDC172P0C7W6 258 aa17.43■□□□□ 0.38
ABCC1-201ENST00000399408 PARP10Q53GL7 1025 aa17.43■□□□□ 0.38
ABCC1-201ENST00000399408 ITGA6P23229 1130 aa17.42■□□□□ 0.38
ABCC1-201ENST00000399408 HLTFQ14527 1009 aaKnown RBP eCLIP17.42■□□□□ 0.383e-6■■□□□ 13
ABCC1-201ENST00000399408 OGFOD1Q8N543 542 aa17.42■□□□□ 0.38
ABCC1-201ENST00000399408 CLCN1P35523 988 aa17.42■□□□□ 0.38
ABCC1-201ENST00000399408 TAOK3Q9H2K8 898 aa17.42■□□□□ 0.38
ABCC1-201ENST00000399408 PLEKHG3A1L390 1219 aa17.42■□□□□ 0.38
ABCC1-201ENST00000399408 CDCA7Q9BWT1 371 aaPredicted RBP17.42■□□□□ 0.38
ABCC1-201ENST00000399408 DENND2AQ9ULE3 1009 aa17.42■□□□□ 0.38
ABCC1-201ENST00000399408 IFI16Q16666 785 aaKnown RBP17.42■□□□□ 0.38
ABCC1-201ENST00000399408 SMARCC2Q8TAQ2 1214 aa17.42■□□□□ 0.38
ABCC1-201ENST00000399408 KIAA0232Q92628 1395 aa17.42■□□□□ 0.38
ABCC1-201ENST00000399408 SLC27A2O14975 620 aa17.42■□□□□ 0.38
ABCC1-201ENST00000399408 PLXNC1O60486 1568 aa17.42■□□□□ 0.38
ABCC1-201ENST00000399408 CCDC174Q6PII3 467 aa17.41■□□□□ 0.38
ABCC1-201ENST00000399408 CEP170Q5SW79 1584 aa17.41■□□□□ 0.38
ABCC1-201ENST00000399408 RXRAP19793 462 aa17.41■□□□□ 0.38
ABCC1-201ENST00000399408 LMOD1P29536 600 aaPredicted RBP17.41■□□□□ 0.38
ABCC1-201ENST00000399408 RBM28Q9NW13 759 aaKnown RBP17.41■□□□□ 0.38
ABCC1-201ENST00000399408 SH3TC1Q8TE82 1336 aa17.41■□□□□ 0.38
ABCC1-201ENST00000399408 SGSM2O43147 1006 aa17.41■□□□□ 0.38
ABCC1-201ENST00000399408 KLHDC4Q8TBB5 520 aa17.41■□□□□ 0.38
ABCC1-201ENST00000399408 SNX14Q9Y5W7 946 aa17.41■□□□□ 0.38
ABCC1-201ENST00000399408 RNF123Q5XPI4 1314 aa17.4■□□□□ 0.38
ABCC1-201ENST00000399408 PRPF4BQ13523 1007 aaKnown RBP17.4■□□□□ 0.38
ABCC1-201ENST00000399408 KRT79Q5XKE5 535 aa17.4■□□□□ 0.38
ABCC1-201ENST00000399408 CCDC129Q6ZRS4 1044 aa17.4■□□□□ 0.38
ABCC1-201ENST00000399408 PNMA6EA0A0J9YXQ4 647 aa17.4■□□□□ 0.38
ABCC1-201ENST00000399408 POLR3GO15318 223 aaPredicted RBP17.4■□□□□ 0.38
ABCC1-201ENST00000399408 PUM3Q15397 648 aaKnown RBP17.4■□□□□ 0.38
ABCC1-201ENST00000399408 SUCLG2Q96I99 432 aa17.4■□□□□ 0.38
ABCC1-201ENST00000399408 ZSWIM4Q9H7M6 989 aa17.4■□□□□ 0.38
ABCC1-201ENST00000399408 GCOM1H8Y6P7 765 aaPredicted RBP17.4■□□□□ 0.38
ABCC1-201ENST00000399408 MYZAPP0CAP1 466 aa17.4■□□□□ 0.38
ABCC1-201ENST00000399408 GNA11P29992 359 aa17.4■□□□□ 0.38
ABCC1-201ENST00000399408 GTPBP4Q9BZE4 634 aaKnown RBP17.4■□□□□ 0.38
ABCC1-201ENST00000399408 KIF24Q5T7B8 1368 aa17.4■□□□□ 0.38
ABCC1-201ENST00000399408 TUBB4AP04350 444 aa17.4■□□□□ 0.38
ABCC1-201ENST00000399408 XAGE2Q96GT9 111 aa17.39■□□□□ 0.38
ABCC1-201ENST00000399408 MPHOSPH6Q99547 160 aaKnown RBP17.39■□□□□ 0.37
ABCC1-201ENST00000399408 DNAI1Q9UI46 699 aa17.39■□□□□ 0.37
ABCC1-201ENST00000399408 CTNNA2P26232 953 aa17.39■□□□□ 0.37
ABCC1-201ENST00000399408 BMS1Q14692 1282 aaKnown RBP17.39■□□□□ 0.37
ABCC1-201ENST00000399408 PDE8AO60658 829 aa17.39■□□□□ 0.37
ABCC1-201ENST00000399408 CKAP4Q07065 602 aaKnown RBP17.39■□□□□ 0.37
ABCC1-201ENST00000399408 BICD1Q96G01 975 aa17.39■□□□□ 0.37
ABCC1-201ENST00000399408 TMEM87BQ96K49 555 aa17.39■□□□□ 0.37
ABCC1-201ENST00000399408 TMEM2Q9UHN6 1383 aa17.39■□□□□ 0.37
ABCC1-201ENST00000399408 SPECC1Q5M775 1068 aa17.39■□□□□ 0.37
ABCC1-201ENST00000399408 USP37Q86T82 979 aa17.39■□□□□ 0.37
ABCC1-201ENST00000399408 TNNI2P48788 182 aa17.38■□□□□ 0.37
ABCC1-201ENST00000399408 MAP2K1Q02750 393 aaPredicted RBP17.38■□□□□ 0.37
ABCC1-201ENST00000399408 HS1BP3Q53T59 392 aa17.38■□□□□ 0.37
ABCC1-201ENST00000399408 TTC12Q9H892 705 aaPredicted RBP17.38■□□□□ 0.37
ABCC1-201ENST00000399408 GCKRQ14397 625 aa17.38■□□□□ 0.37
ABCC1-201ENST00000399408 CCDC91Q7Z6B0 441 aa17.38■□□□□ 0.37
ABCC1-201ENST00000399408 HOOK3Q86VS8 718 aa17.38■□□□□ 0.37
ABCC1-201ENST00000399408 TBC1D5Q92609 795 aa17.38■□□□□ 0.37
ABCC1-201ENST00000399408 APPBP2Q92624 585 aa17.38■□□□□ 0.37
ABCC1-201ENST00000399408 MMRN2Q9H8L6 949 aa17.38■□□□□ 0.37
ABCC1-201ENST00000399408 MCM7P33993 719 aa17.38■□□□□ 0.37
ABCC1-201ENST00000399408 EIF4A1P60842 406 aaKnown RBP17.38■□□□□ 0.37
ABCC1-201ENST00000399408 EYA3Q99504 573 aa17.38■□□□□ 0.37
ABCC1-201ENST00000399408 MAGI3Q5TCQ9 1506 aa17.38■□□□□ 0.37
ABCC1-201ENST00000399408 GNPATO15228 680 aa17.37■□□□□ 0.37
ABCC1-201ENST00000399408 KRT13P13646 458 aa17.37■□□□□ 0.37
ABCC1-201ENST00000399408 SPDYE3A6NKU9 549 aa17.37■□□□□ 0.37
ABCC1-201ENST00000399408 ARHGEF5Q12774 1597 aa17.37■□□□□ 0.37
ABCC1-201ENST00000399408 LLPHQ9BRT6 129 aaKnown RBP17.37■□□□□ 0.37
ABCC1-201ENST00000399408 FAM160A1Q05DH4 1040 aa17.37■□□□□ 0.37
ABCC1-201ENST00000399408 CTR9Q6PD62 1173 aa17.37■□□□□ 0.37
ABCC1-201ENST00000399408 FERMT2Q96AC1 680 aa17.37■□□□□ 0.37
ABCC1-201ENST00000399408 FAM227BQ96M60 508 aa17.37■□□□□ 0.37
ABCC1-201ENST00000399408 ZKSCAN3Q9BRR0 538 aa17.37■□□□□ 0.37
ABCC1-201ENST00000399408 CTAGE15A4D2H0 777 aa17.37■□□□□ 0.37
ABCC1-201ENST00000399408 CTAGE8P0CG41 777 aa17.37■□□□□ 0.37
ABCC1-201ENST00000399408 CTAGE6Q86UF2 777 aa17.37■□□□□ 0.37
ABCC1-201ENST00000399408 CTAGE4Q8IX94 777 aa17.37■□□□□ 0.37
ABCC1-201ENST00000399408 IQUBQ8NA54 791 aa17.37■□□□□ 0.37
ABCC1-201ENST00000399408 BICDL2A1A5D9 508 aa17.37■□□□□ 0.37
ABCC1-201ENST00000399408 BCCIPQ9P287 314 aaKnown RBP eCLIP17.37■□□□□ 0.37
ABCC1-201ENST00000399408 GCC2Q8IWJ2 1684 aa17.37■□□□□ 0.37
ABCC1-201ENST00000399408 B4E1Z4 1266 aa17.37■□□□□ 0.37
ABCC1-201ENST00000399408 CCDC175P0C221 793 aa17.37■□□□□ 0.37
ABCC1-201ENST00000399408 KBTBD3Q8NAB2 608 aa17.37■□□□□ 0.37
ABCC1-201ENST00000399408 TFCP2L1Q9NZI6 479 aa17.37■□□□□ 0.37
ABCC1-201ENST00000399408 PARP3Q9Y6F1 533 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms