RNA–Protein interactions for RNA: ENST00000399196.1

LINC00243-201, long intergenic non-protein coding RNA 243, humanhuman

TSL 2 BASIC

Gene LINC00243, Length 2,052 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00243-201ENST00000399196 TM6SF1Q9BZW5 370 aa11.28□□□□□ -0.6
LINC00243-201ENST00000399196 CWC22Q9HCG8 908 aaKnown RBP11.28□□□□□ -0.6
LINC00243-201ENST00000399196 TNRC6CQ9HCJ0 1690 aaKnown RBP11.28□□□□□ -0.6
LINC00243-201ENST00000399196 WTIPA6NIX2 430 aaPredicted RBP11.28□□□□□ -0.6
LINC00243-201ENST00000399196 M0R2C6 588 aa11.28□□□□□ -0.6
LINC00243-201ENST00000399196 SERPINB2P05120 415 aa11.28□□□□□ -0.6
LINC00243-201ENST00000399196 TM4SF1P30408 202 aa11.28□□□□□ -0.6
LINC00243-201ENST00000399196 PHKA1P46020 1223 aa11.28□□□□□ -0.6
LINC00243-201ENST00000399196 RPS8P62241 208 aaKnown RBP11.28□□□□□ -0.6
LINC00243-201ENST00000399196 TICAM2Q86XR7 235 aa11.28□□□□□ -0.6
LINC00243-201ENST00000399196 ZNF512BQ96KM6 892 aaPredicted RBP11.28□□□□□ -0.6
LINC00243-201ENST00000399196 TCHHQ07283 1943 aa11.27□□□□□ -0.61
LINC00243-201ENST00000399196 BAG4O95429 457 aaKnown RBP11.27□□□□□ -0.61
LINC00243-201ENST00000399196 CYP21A2P08686 494 aa11.27□□□□□ -0.61
LINC00243-201ENST00000399196 PRR5LQ6MZQ0 368 aa11.27□□□□□ -0.61
LINC00243-201ENST00000399196 FLAD1Q8NFF5 587 aa11.27□□□□□ -0.61
LINC00243-201ENST00000399196 INTS4Q96HW7 963 aaKnown RBP11.27□□□□□ -0.61
LINC00243-201ENST00000399196 A0A1B0GUL6 1792 aa11.27□□□□□ -0.61
LINC00243-201ENST00000399196 RNF113AO15541 343 aaKnown RBP11.26□□□□□ -0.61
LINC00243-201ENST00000399196 ARID4AP29374 1257 aaPredicted RBP11.26□□□□□ -0.61
LINC00243-201ENST00000399196 TTF1Q15361 905 aaPredicted RBP11.26□□□□□ -0.61
LINC00243-201ENST00000399196 TSGA10IPQ3SY00 556 aa11.26□□□□□ -0.61
LINC00243-201ENST00000399196 STOX1Q6ZVD7 989 aa11.26□□□□□ -0.61
LINC00243-201ENST00000399196 RPGRQ92834 1020 aaKnown RBP11.26□□□□□ -0.61
LINC00243-201ENST00000399196 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.26□□□□□ -0.61
LINC00243-201ENST00000399196 PDRG1Q9NUG6 133 aa11.26□□□□□ -0.61
LINC00243-201ENST00000399196 MINPP1Q9UNW1 487 aa11.26□□□□□ -0.61
LINC00243-201ENST00000399196 POLRMTO00411 1230 aaKnown RBP11.26□□□□□ -0.61
LINC00243-201ENST00000399196 TRAK2O60296 914 aa11.26□□□□□ -0.61
LINC00243-201ENST00000399196 ZFYP08048 801 aaPredicted RBP11.26□□□□□ -0.61
LINC00243-201ENST00000399196 ZKSCAN1P17029 563 aaPredicted RBP11.26□□□□□ -0.61
LINC00243-201ENST00000399196 NUCB2P80303 420 aa11.26□□□□□ -0.61
LINC00243-201ENST00000399196 R3HDM1Q15032 1099 aaKnown RBP11.26□□□□□ -0.61
LINC00243-201ENST00000399196 FOXD4L5Q5VV16 416 aaPredicted RBP11.26□□□□□ -0.61
LINC00243-201ENST00000399196 NLGN1Q8N2Q7 840 aa11.26□□□□□ -0.61
LINC00243-201ENST00000399196 FOXD4L4Q8WXT5 416 aaPredicted RBP11.26□□□□□ -0.61
LINC00243-201ENST00000399196 HELLSQ9NRZ9 838 aa11.26□□□□□ -0.61
LINC00243-201ENST00000399196 TPCN1Q9ULQ1 816 aa11.26□□□□□ -0.61
LINC00243-201ENST00000399196 LIMCH1Q9UPQ0 1083 aa11.26□□□□□ -0.61
LINC00243-201ENST00000399196 CYP46A1Q9Y6A2 500 aa11.26□□□□□ -0.61
LINC00243-201ENST00000399196 NRXN2Q9P2S2 1712 aa11.25□□□□□ -0.61
LINC00243-201ENST00000399196 HSPD1P10809 573 aaKnown RBP11.25□□□□□ -0.61
LINC00243-201ENST00000399196 VASPP50552 380 aaPredicted RBP11.25□□□□□ -0.61
LINC00243-201ENST00000399196 UBE4AQ14139 1066 aa11.25□□□□□ -0.61
LINC00243-201ENST00000399196 ME3Q16798 604 aa11.25□□□□□ -0.61
LINC00243-201ENST00000399196 WASHC4Q2M389 1173 aa11.25□□□□□ -0.61
LINC00243-201ENST00000399196 RNF20Q5VTR2 975 aa11.25□□□□□ -0.61
LINC00243-201ENST00000399196 ZSCAN25Q6NSZ9 544 aa11.25□□□□□ -0.61
LINC00243-201ENST00000399196 ANKRD2Q9GZV1 360 aa11.25□□□□□ -0.61
LINC00243-201ENST00000399196 PUS7LQ9H0K6 701 aaKnown RBP11.25□□□□□ -0.61
LINC00243-201ENST00000399196 PIH1D3Q9NQM4 214 aaKnown RBP11.25□□□□□ -0.61
LINC00243-201ENST00000399196 PSDA5PKW4 1024 aaPredicted RBP11.24□□□□□ -0.61
LINC00243-201ENST00000399196 BRD1O95696 1058 aa11.24□□□□□ -0.61
LINC00243-201ENST00000399196 BCAMP50895 628 aa11.24□□□□□ -0.61
LINC00243-201ENST00000399196 TOB2Q14106 344 aaPredicted RBP11.24□□□□□ -0.61
LINC00243-201ENST00000399196 CAVIN4Q5BKX8 364 aa11.24□□□□□ -0.61
LINC00243-201ENST00000399196 TTLL5Q6EMB2 1281 aa11.24□□□□□ -0.61
LINC00243-201ENST00000399196 VPS37DQ86XT2 251 aa11.24□□□□□ -0.61
LINC00243-201ENST00000399196 SPATA5Q8NB90 893 aa11.24□□□□□ -0.61
LINC00243-201ENST00000399196 DDX11L8A8MPP1 907 aa11.24□□□□□ -0.61
LINC00243-201ENST00000399196 IDH1O75874 414 aaKnown RBP11.24□□□□□ -0.61
LINC00243-201ENST00000399196 MMP10P09238 476 aa11.24□□□□□ -0.61
LINC00243-201ENST00000399196 RPS6KB1P23443 525 aa11.24□□□□□ -0.61
LINC00243-201ENST00000399196 GBP4Q96PP9 640 aa11.24□□□□□ -0.61
LINC00243-201ENST00000399196 GNL3LQ9NVN8 582 aaKnown RBP11.24□□□□□ -0.61
LINC00243-201ENST00000399196 HMG20BQ9P0W2 317 aa11.24□□□□□ -0.61
LINC00243-201ENST00000399196 ATXN8OSP0DMR3 200 aa11.23□□□□□ -0.61
LINC00243-201ENST00000399196 BRD2P25440 801 aaKnown RBP11.23□□□□□ -0.61
LINC00243-201ENST00000399196 GRAPQ13588 217 aa11.23□□□□□ -0.61
LINC00243-201ENST00000399196 RASGRF1Q13972 1273 aa11.23□□□□□ -0.61
LINC00243-201ENST00000399196 SLC51AQ86UW1 340 aa11.23□□□□□ -0.61
LINC00243-201ENST00000399196 CCDC83Q8IWF9 413 aa11.23□□□□□ -0.61
LINC00243-201ENST00000399196 NECAB1Q8N987 351 aa11.23□□□□□ -0.61
LINC00243-201ENST00000399196 GRAPLQ8TC17 118 aaPredicted RBP11.23□□□□□ -0.61
LINC00243-201ENST00000399196 DSCC1Q9BVC3 393 aa11.23□□□□□ -0.61
LINC00243-201ENST00000399196 ZMYND15Q9H091 742 aa11.23□□□□□ -0.61
LINC00243-201ENST00000399196 GZF1Q9H116 711 aaPredicted RBP11.23□□□□□ -0.61
LINC00243-201ENST00000399196 U3KPZ7 1027 aaPredicted RBP11.23□□□□□ -0.61
LINC00243-201ENST00000399196 ANKRD31Q8N7Z5 1873 aa11.23□□□□□ -0.61
LINC00243-201ENST00000399196 DOCK2Q92608 1830 aa11.23□□□□□ -0.61
LINC00243-201ENST00000399196 SLC9C2Q5TAH2 1124 aa11.23□□□□□ -0.61
LINC00243-201ENST00000399196 BLOC1S2Q6QNY1 142 aa11.23□□□□□ -0.61
LINC00243-201ENST00000399196 IL27Q8NEV9 243 aa11.23□□□□□ -0.61
LINC00243-201ENST00000399196 RBM17Q96I25 401 aaKnown RBP11.23□□□□□ -0.61
LINC00243-201ENST00000399196 ANKIB1Q9P2G1 1089 aa11.23□□□□□ -0.61
LINC00243-201ENST00000399196 ZBTB7AO95365 584 aa11.22□□□□□ -0.61
LINC00243-201ENST00000399196 GYG1P46976 350 aa11.22□□□□□ -0.61
LINC00243-201ENST00000399196 APPBP2Q92624 585 aa11.22□□□□□ -0.61
LINC00243-201ENST00000399196 WWC3Q9ULE0 1092 aa11.22□□□□□ -0.61
LINC00243-201ENST00000399196 PARP3Q9Y6F1 533 aa11.22□□□□□ -0.61
LINC00243-201ENST00000399196 PSMA5P28066 241 aa11.21□□□□□ -0.61
LINC00243-201ENST00000399196 ADD2P35612 726 aa11.21□□□□□ -0.61
LINC00243-201ENST00000399196 MAP3K12Q12852 859 aa11.21□□□□□ -0.61
LINC00243-201ENST00000399196 CRY2Q49AN0 593 aa11.21□□□□□ -0.61
LINC00243-201ENST00000399196 MCTP1Q6DN14 999 aa11.21□□□□□ -0.61
LINC00243-201ENST00000399196 NEK1Q96PY6 1258 aa11.21□□□□□ -0.61
LINC00243-201ENST00000399196 LRRC2Q9BYS8 371 aa11.21□□□□□ -0.61
LINC00243-201ENST00000399196 IQSEC3Q9UPP2 1182 aaPredicted RBP11.21□□□□□ -0.61
LINC00243-201ENST00000399196 TCRBV5S4A2TA0A5A2 114 aa11.21□□□□□ -0.62
LINC00243-201ENST00000399196 NKX2-3Q8TAU0 364 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms