RNA–Protein interactions for RNA: ENST00000399177.7

CCDC178-203, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 5

Gene CCDC178, Length 1,017 nt, Biotype non stop decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-203ENST00000399177 USP26Q9BXU7 913 aa8.3□□□□□ -1.08
CCDC178-203ENST00000399177 PCMTD2Q9NV79 361 aa8.3□□□□□ -1.08
CCDC178-203ENST00000399177 TRPA1O75762 1119 aa8.29□□□□□ -1.08
CCDC178-203ENST00000399177 WISP1O95388 367 aa8.29□□□□□ -1.08
CCDC178-203ENST00000399177 ACPPP15309 386 aa8.29□□□□□ -1.08
CCDC178-203ENST00000399177 Q6ZS46 218 aa8.29□□□□□ -1.08
CCDC178-203ENST00000399177 GIMAP7Q8NHV1 300 aa8.29□□□□□ -1.08
CCDC178-203ENST00000399177 UBASH3BQ8TF42 649 aa8.29□□□□□ -1.08
CCDC178-203ENST00000399177 NXPE3Q969Y0 559 aa8.29□□□□□ -1.08
CCDC178-203ENST00000399177 CHRDQ9H2X0 955 aa8.29□□□□□ -1.08
CCDC178-203ENST00000399177 FOXD3Q9UJU5 478 aaPredicted RBP8.29□□□□□ -1.08
CCDC178-203ENST00000399177 SUPT5HO00267 1087 aaKnown RBP8.28□□□□□ -1.08
CCDC178-203ENST00000399177 DDX3YO15523 660 aaKnown RBP8.28□□□□□ -1.08
CCDC178-203ENST00000399177 ICMTO60725 284 aa8.28□□□□□ -1.08
CCDC178-203ENST00000399177 GRIK1P39086 918 aa8.28□□□□□ -1.08
CCDC178-203ENST00000399177 HP1BP3Q5SSJ5 553 aaPredicted RBP8.28□□□□□ -1.08
CCDC178-203ENST00000399177 CCER1Q8TC90 406 aaPredicted RBP8.28□□□□□ -1.08
CCDC178-203ENST00000399177 CYP4F12Q9HCS2 524 aa8.28□□□□□ -1.08
CCDC178-203ENST00000399177 CCDC87Q9NVE4 849 aa8.28□□□□□ -1.08
CCDC178-203ENST00000399177 KCNK4Q9NYG8 393 aa8.28□□□□□ -1.08
CCDC178-203ENST00000399177 FZD6O60353 706 aa8.27□□□□□ -1.09
CCDC178-203ENST00000399177 IGLV1-40P01703 118 aa8.27□□□□□ -1.09
CCDC178-203ENST00000399177 RXRBP28702 533 aa8.27□□□□□ -1.09
CCDC178-203ENST00000399177 KIAA1211Q6ZU35 1233 aa8.27□□□□□ -1.09
CCDC178-203ENST00000399177 GJD3Q8N144 294 aa8.27□□□□□ -1.09
CCDC178-203ENST00000399177 FOXD4L4Q8WXT5 416 aaPredicted RBP8.27□□□□□ -1.09
CCDC178-203ENST00000399177 UBL7Q96S82 380 aaPredicted RBP8.27□□□□□ -1.09
CCDC178-203ENST00000399177 ZFYVE1Q9HBF4 777 aa8.27□□□□□ -1.09
CCDC178-203ENST00000399177 ZFYVE28Q9HCC9 887 aa8.27□□□□□ -1.09
CCDC178-203ENST00000399177 SOX13Q9UN79 622 aa8.27□□□□□ -1.09
CCDC178-203ENST00000399177 GSTM4Q03013 218 aa8.26□□□□□ -1.09
CCDC178-203ENST00000399177 PHLDB3Q6NSJ2 640 aa8.26□□□□□ -1.09
CCDC178-203ENST00000399177 C12orf50Q8NA57 414 aaPredicted RBP8.26□□□□□ -1.09
CCDC178-203ENST00000399177 MYRFLQ96LU7 910 aa8.26□□□□□ -1.09
CCDC178-203ENST00000399177 HHIPQ96QV1 700 aa8.26□□□□□ -1.09
CCDC178-203ENST00000399177 HIF3AQ9Y2N7 669 aa8.26□□□□□ -1.09
CCDC178-203ENST00000399177 NFKBIEO00221 500 aa8.25□□□□□ -1.09
CCDC178-203ENST00000399177 HYAL3O43820 417 aaPredicted RBP8.25□□□□□ -1.09
CCDC178-203ENST00000399177 BMP3P12645 472 aa8.25□□□□□ -1.09
CCDC178-203ENST00000399177 YIPF2Q9BWQ6 316 aa8.25□□□□□ -1.09
CCDC178-203ENST00000399177 ADAM11O75078 769 aa8.24□□□□□ -1.09
CCDC178-203ENST00000399177 POLR3DP05423 398 aaPredicted RBP8.24□□□□□ -1.09
CCDC178-203ENST00000399177 SERPINB4P48594 390 aa8.24□□□□□ -1.09
CCDC178-203ENST00000399177 USP11P51784 963 aa8.24□□□□□ -1.09
CCDC178-203ENST00000399177 HNRNPUQ00839 825 aaKnown RBP eCLIP8.24□□□□□ -1.09
CCDC178-203ENST00000399177 BEND4Q6ZU67 534 aa8.24□□□□□ -1.09
CCDC178-203ENST00000399177 CLEC10AQ8IUN9 316 aa8.24□□□□□ -1.09
CCDC178-203ENST00000399177 FAM46AQ96IP4 442 aaKnown RBP8.24□□□□□ -1.09
CCDC178-203ENST00000399177 BHLHE41Q9C0J9 482 aaPredicted RBP8.24□□□□□ -1.09
CCDC178-203ENST00000399177 SOX17Q9H6I2 414 aaPredicted RBP8.24□□□□□ -1.09
CCDC178-203ENST00000399177 LIN7BQ9HAP6 207 aa8.24□□□□□ -1.09
CCDC178-203ENST00000399177 COBLO75128 1261 aa8.23□□□□□ -1.09
CCDC178-203ENST00000399177 SSTR4P31391 388 aa8.23□□□□□ -1.09
CCDC178-203ENST00000399177 NFIAQ12857 509 aa8.23□□□□□ -1.09
CCDC178-203ENST00000399177 CITED4Q96RK1 184 aa8.23□□□□□ -1.09
CCDC178-203ENST00000399177 DBNDD2Q9BQY9 259 aa8.23□□□□□ -1.09
CCDC178-203ENST00000399177 EHD4Q9H223 541 aa8.23□□□□□ -1.09
CCDC178-203ENST00000399177 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.23□□□□□ -1.09
CCDC178-203ENST00000399177 SOX1O00570 391 aaPredicted RBP8.22□□□□□ -1.09
CCDC178-203ENST00000399177 CYP11A1P05108 521 aa8.22□□□□□ -1.09
CCDC178-203ENST00000399177 RNF43Q68DV7 783 aa8.22□□□□□ -1.09
CCDC178-203ENST00000399177 ADAMTSL4Q6UY14 1074 aa8.22□□□□□ -1.09
CCDC178-203ENST00000399177 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.22□□□□□ -1.09
CCDC178-203ENST00000399177 TRIM42Q8IWZ5 723 aa8.22□□□□□ -1.09
CCDC178-203ENST00000399177 FAM20CQ8IXL6 584 aa8.22□□□□□ -1.09
CCDC178-203ENST00000399177 C7orf69Q9H7B7 122 aa8.22□□□□□ -1.09
CCDC178-203ENST00000399177 LATS2Q9NRM7 1088 aa8.22□□□□□ -1.09
CCDC178-203ENST00000399177 HMX2A2RU54 273 aa8.21□□□□□ -1.1
CCDC178-203ENST00000399177 MEGF11A6BM72 1044 aa8.21□□□□□ -1.1
CCDC178-203ENST00000399177 CPNE3O75131 537 aaKnown RBP8.21□□□□□ -1.1
CCDC178-203ENST00000399177 INTS5Q6P9B9 1019 aaKnown RBP8.21□□□□□ -1.1
CCDC178-203ENST00000399177 VN1R5Q7Z5H4 357 aa8.21□□□□□ -1.1
CCDC178-203ENST00000399177 ARMC10Q8N2F6 343 aa8.21□□□□□ -1.1
CCDC178-203ENST00000399177 FAM83CQ9BQN1 747 aa8.21□□□□□ -1.1
CCDC178-203ENST00000399177 CLEC4MQ9H2X3 399 aaPredicted RBP8.21□□□□□ -1.1
CCDC178-203ENST00000399177 RAD18Q9NS91 495 aa8.21□□□□□ -1.1
CCDC178-203ENST00000399177 ATG3Q9NT62 314 aa8.21□□□□□ -1.1
CCDC178-203ENST00000399177 PPP4R2Q9NY27 417 aa8.21□□□□□ -1.1
CCDC178-203ENST00000399177 A0A096LPE4 126 aa8.2□□□□□ -1.1
CCDC178-203ENST00000399177 A0A1W2PPZ6 126 aa8.2□□□□□ -1.1
CCDC178-203ENST00000399177 ESRRAP11474 423 aaPredicted RBP8.2□□□□□ -1.1
CCDC178-203ENST00000399177 PREPP48147 710 aa8.2□□□□□ -1.1
CCDC178-203ENST00000399177 EXOSC6Q5RKV6 272 aaKnown RBP8.2□□□□□ -1.1
CCDC178-203ENST00000399177 GALNT12Q8IXK2 581 aa8.2□□□□□ -1.1
CCDC178-203ENST00000399177 CORO1BQ9BR76 489 aa8.2□□□□□ -1.1
CCDC178-203ENST00000399177 BIN2Q9UBW5 565 aaPredicted RBP8.2□□□□□ -1.1
CCDC178-203ENST00000399177 GADD45BO75293 160 aaPredicted RBP8.19□□□□□ -1.1
CCDC178-203ENST00000399177 PCDH1Q08174 1060 aa8.19□□□□□ -1.1
CCDC178-203ENST00000399177 PEAR1Q5VY43 1037 aaPredicted RBP8.19□□□□□ -1.1
CCDC178-203ENST00000399177 PAOXQ6QHF9 649 aa8.19□□□□□ -1.1
CCDC178-203ENST00000399177 KRTAP19-1Q8IUB9 90 aa8.19□□□□□ -1.1
CCDC178-203ENST00000399177 RETREG2Q8NC44 543 aa8.19□□□□□ -1.1
CCDC178-203ENST00000399177 A0A1W2PP55 124 aa8.18□□□□□ -1.1
CCDC178-203ENST00000399177 MAP4P27816 1152 aaKnown RBP8.18□□□□□ -1.1
CCDC178-203ENST00000399177 SMG8Q8ND04 991 aaKnown RBP8.18□□□□□ -1.1
CCDC178-203ENST00000399177 DMRTB1Q96MA1 342 aa8.18□□□□□ -1.1
CCDC178-203ENST00000399177 TRAK1Q9UPV9 953 aa8.18□□□□□ -1.1
CCDC178-203ENST00000399177 LOC100289279A0A1B0GTE1 492 aa8.17□□□□□ -1.1
CCDC178-203ENST00000399177 METTL12A8MUP2 240 aa8.17□□□□□ -1.1
CCDC178-203ENST00000399177 NFKBIBQ15653 356 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms