RNA–Protein interactions for RNA: ENST00000399177.7

CCDC178-203, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 5

Gene CCDC178, Length 1,017 nt, Biotype non stop decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-203ENST00000399177 AEBP2Q6ZN18 517 aaPredicted RBP27.2■■□□□ 1.94
CCDC178-203ENST00000399177 CHIC1Q5VXU3 224 aa26.22■■□□□ 1.79
CCDC178-203ENST00000399177 SENP3Q9H4L4 574 aaPredicted RBP23.46■■□□□ 1.35
CCDC178-203ENST00000399177 PHF23Q9BUL5 403 aaPredicted RBP23■■□□□ 1.27
CCDC178-203ENST00000399177 FOXD1Q16676 465 aa21.88■■□□□ 1.09
CCDC178-203ENST00000399177 POTEDQ86YR6 584 aa21.73■■□□□ 1.07
CCDC178-203ENST00000399177 PLPPR3Q6T4P5 718 aa21.25■□□□□ 0.99
CCDC178-203ENST00000399177 MSH5O43196 834 aa20.9■□□□□ 0.94
CCDC178-203ENST00000399177 ADRA2BP18089 450 aa20.39■□□□□ 0.85
CCDC178-203ENST00000399177 PIAS4Q8N2W9 510 aaPredicted RBP20.38■□□□□ 0.85
CCDC178-203ENST00000399177 PPP6R1Q9UPN7 881 aa20.33■□□□□ 0.85
CCDC178-203ENST00000399177 SCAF1Q9H7N4 1312 aaKnown RBP18.94■□□□□ 0.62
CCDC178-203ENST00000399177 PPP4R3CPQ6ZMV5 832 aa18.6■□□□□ 0.57
CCDC178-203ENST00000399177 MAPK8IP2Q13387 824 aaPredicted RBP18.58■□□□□ 0.56
CCDC178-203ENST00000399177 DMRT2Q9Y5R5 561 aa18.47■□□□□ 0.55
CCDC178-203ENST00000399177 CACNB1Q02641 598 aaPredicted RBP18.4■□□□□ 0.54
CCDC178-203ENST00000399177 CNKSR2Q8WXI2 1034 aa18.22■□□□□ 0.51
CCDC178-203ENST00000399177 NCBP3Q53F19 620 aaKnown RBP18.19■□□□□ 0.5
CCDC178-203ENST00000399177 RNF216Q9NWF9 866 aaPredicted RBP17.94■□□□□ 0.46
CCDC178-203ENST00000399177 DCAF8L1A6NGE4 600 aa17.93■□□□□ 0.46
CCDC178-203ENST00000399177 HOXD11P31277 338 aaPredicted RBP17.89■□□□□ 0.45
CCDC178-203ENST00000399177 RNF39Q9H2S5 420 aa17.71■□□□□ 0.43
CCDC178-203ENST00000399177 NPM3O75607 178 aaKnown RBP17.68■□□□□ 0.42
CCDC178-203ENST00000399177 KCNA4P22459 653 aa17.64■□□□□ 0.41
CCDC178-203ENST00000399177 C1QBPQ07021 282 aaKnown RBP17.45■□□□□ 0.38
CCDC178-203ENST00000399177 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.27■□□□□ 0.36
CCDC178-203ENST00000399177 DNAJC5BQ9UF47 199 aa17.25■□□□□ 0.35
CCDC178-203ENST00000399177 POTEHQ6S545 545 aa16.89■□□□□ 0.29
CCDC178-203ENST00000399177 SLC4A1APQ9BWU0 796 aaKnown RBP16.86■□□□□ 0.29
CCDC178-203ENST00000399177 U3KPZ7 1027 aaPredicted RBP16.73■□□□□ 0.27
CCDC178-203ENST00000399177 SLC4A2P04920 1241 aa16.71■□□□□ 0.27
CCDC178-203ENST00000399177 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.66■□□□□ 0.26
CCDC178-203ENST00000399177 APLP2Q06481 763 aa16.66■□□□□ 0.26
CCDC178-203ENST00000399177 HNRNPUL2Q1KMD3 747 aaKnown RBP16.66■□□□□ 0.26
CCDC178-203ENST00000399177 CAPN15O75808 1086 aa16.55■□□□□ 0.24
CCDC178-203ENST00000399177 SAMD1Q6SPF0 538 aaPredicted RBP16.51■□□□□ 0.23
CCDC178-203ENST00000399177 MYCNP04198 464 aaPredicted RBP16.46■□□□□ 0.23
CCDC178-203ENST00000399177 FOXD4L1Q9NU39 408 aa16.45■□□□□ 0.22
CCDC178-203ENST00000399177 SPINK5Q9NQ38 1064 aaPredicted RBP16.39■□□□□ 0.21
CCDC178-203ENST00000399177 ZNF219Q9P2Y4 722 aaPredicted RBP16.35■□□□□ 0.21
CCDC178-203ENST00000399177 TRHP20396 242 aaPredicted RBP16.34■□□□□ 0.21
CCDC178-203ENST00000399177 DSG3P32926 999 aa16.28■□□□□ 0.2
CCDC178-203ENST00000399177 ABCB7O75027 752 aa16.1■□□□□ 0.17
CCDC178-203ENST00000399177 ZBTB22O15209 634 aa16.09■□□□□ 0.17
CCDC178-203ENST00000399177 ATXN8OSP0DMR3 200 aa15.94■□□□□ 0.14
CCDC178-203ENST00000399177 POLA2Q14181 598 aa15.92■□□□□ 0.14
CCDC178-203ENST00000399177 EHMT2Q96KQ7 1210 aa15.92■□□□□ 0.14
CCDC178-203ENST00000399177 ATF5Q9Y2D1 282 aaPredicted RBP15.84■□□□□ 0.13
CCDC178-203ENST00000399177 ZBTB12Q9Y330 459 aaPredicted RBP15.78■□□□□ 0.12
CCDC178-203ENST00000399177 CSRNP3Q8WYN3 585 aa15.75■□□□□ 0.11
CCDC178-203ENST00000399177 RBM42Q9BTD8 480 aaKnown RBP15.65■□□□□ 0.1
CCDC178-203ENST00000399177 CHRDL2Q6WN34 429 aa15.57■□□□□ 0.08
CCDC178-203ENST00000399177 FBLN2P98095 1184 aa15.55■□□□□ 0.08
CCDC178-203ENST00000399177 SP7Q8TDD2 431 aaPredicted RBP15.45■□□□□ 0.06
CCDC178-203ENST00000399177 OSCARQ8IYS5 282 aa15.36■□□□□ 0.05
CCDC178-203ENST00000399177 AKT1S1Q96B36 256 aa15.26■□□□□ 0.03
CCDC178-203ENST00000399177 SPDYE2BA6NHP3 402 aa15.21■□□□□ 0.03
CCDC178-203ENST00000399177 SPDYE6P0CI01 402 aa15.21■□□□□ 0.03
CCDC178-203ENST00000399177 SPDYE2Q495Y8 402 aa15.21■□□□□ 0.03
CCDC178-203ENST00000399177 MKRN4PQ13434 485 aaPredicted RBP15.14■□□□□ 0.01
CCDC178-203ENST00000399177 ZNF692Q9BU19 519 aaPredicted RBP15.13■□□□□ 0.01
CCDC178-203ENST00000399177 REM2Q8IYK8 340 aaPredicted RBP15.07■□□□□ 0
CCDC178-203ENST00000399177 PIP4P2Q8N4L2 257 aa14.99□□□□□ -0.01
CCDC178-203ENST00000399177 HAX1O00165 279 aa14.97□□□□□ -0.01
CCDC178-203ENST00000399177 SPDYE1Q8NFV5 336 aaPredicted RBP14.91□□□□□ -0.02
CCDC178-203ENST00000399177 SSUH2Q9Y2M2 353 aa14.91□□□□□ -0.02
CCDC178-203ENST00000399177 CLEC11AQ9Y240 323 aa14.89□□□□□ -0.03
CCDC178-203ENST00000399177 PITPNM1O00562 1244 aa14.88□□□□□ -0.03
CCDC178-203ENST00000399177 PABPN1Q86U42 306 aaKnown RBP eCLIP14.86□□□□□ -0.03
CCDC178-203ENST00000399177 SPDYE4A6NLX3 237 aa14.82□□□□□ -0.04
CCDC178-203ENST00000399177 FXR2P51116 673 aaKnown RBP eCLIP14.8□□□□□ -0.04
CCDC178-203ENST00000399177 PRR29P0C7W0 189 aa14.69□□□□□ -0.06
CCDC178-203ENST00000399177 STAG3Q9UJ98 1225 aa14.65□□□□□ -0.06
CCDC178-203ENST00000399177 EVX2Q03828 476 aa14.64□□□□□ -0.07
CCDC178-203ENST00000399177 PRKAR2AP13861 404 aaKnown RBP14.57□□□□□ -0.08
CCDC178-203ENST00000399177 LHX8Q68G74 356 aa14.48□□□□□ -0.09
CCDC178-203ENST00000399177 FKBP8Q14318 412 aa14.43□□□□□ -0.1
CCDC178-203ENST00000399177 CHADLQ6NUI6 762 aa14.42□□□□□ -0.1
CCDC178-203ENST00000399177 C19orf67A6NJJ6 358 aa14.35□□□□□ -0.11
CCDC178-203ENST00000399177 GABBR2O75899 941 aa14.33□□□□□ -0.12
CCDC178-203ENST00000399177 PLEKHG5O94827 1062 aa14.33□□□□□ -0.12
CCDC178-203ENST00000399177 PROM2Q8N271 834 aa14.3□□□□□ -0.12
CCDC178-203ENST00000399177 FARP1Q9Y4F1 1045 aaPredicted RBP14.28□□□□□ -0.12
CCDC178-203ENST00000399177 PLSCR2Q9NRY7 297 aa14.22□□□□□ -0.13
CCDC178-203ENST00000399177 NPM1P06748 294 aaKnown RBP eCLIP14.21□□□□□ -0.13
CCDC178-203ENST00000399177 CREBZFQ9NS37 354 aa14.21□□□□□ -0.13
CCDC178-203ENST00000399177 MIER1Q8N108 512 aa14.18□□□□□ -0.14
CCDC178-203ENST00000399177 FBXO3Q9UK99 471 aa14.17□□□□□ -0.14
CCDC178-203ENST00000399177 PAK3O75914 559 aaPredicted RBP14.16□□□□□ -0.14
CCDC178-203ENST00000399177 CD44P16070 742 aaKnown RBP14.16□□□□□ -0.14
CCDC178-203ENST00000399177 PLCD3Q8N3E9 789 aa14.15□□□□□ -0.14
CCDC178-203ENST00000399177 ZBTB47Q9UFB7 747 aaPredicted RBP14.08□□□□□ -0.16
CCDC178-203ENST00000399177 ZRANB1Q9UGI0 708 aa14.02□□□□□ -0.17
CCDC178-203ENST00000399177 POTEIP0CG38 1075 aa13.98□□□□□ -0.17
CCDC178-203ENST00000399177 CLCN6P51797 869 aa13.98□□□□□ -0.17
CCDC178-203ENST00000399177 MNX1P50219 401 aaPredicted RBP13.92□□□□□ -0.18
CCDC178-203ENST00000399177 ZNF579Q8NAF0 562 aaKnown RBP13.88□□□□□ -0.19
CCDC178-203ENST00000399177 TSPYL2Q9H2G4 693 aaPredicted RBP13.88□□□□□ -0.19
CCDC178-203ENST00000399177 KLHL34Q8N239 644 aa13.87□□□□□ -0.19
CCDC178-203ENST00000399177 VASPP50552 380 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms