RNA–Protein interactions for RNA: ENST00000397938.6

EWSR1-206, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-206ENST00000397938 POLR3EQ9NVU0 708 aa20.12■□□□□ 0.81
EWSR1-206ENST00000397938 ARGLU1Q9NWB6 273 aaPredicted RBP20.12■□□□□ 0.81
EWSR1-206ENST00000397938 DNAI1Q9UI46 699 aa20.12■□□□□ 0.81
EWSR1-206ENST00000397938 BIN1O00499 593 aa20.11■□□□□ 0.81
EWSR1-206ENST00000397938 RABL6Q3YEC7 729 aaPredicted RBP20.11■□□□□ 0.81
EWSR1-206ENST00000397938 XAGE3Q8WTP9 111 aa20.11■□□□□ 0.81
EWSR1-206ENST00000397938 UBXN4Q92575 508 aa20.11■□□□□ 0.81
EWSR1-206ENST00000397938 PHF8Q9UPP1 1060 aa20.11■□□□□ 0.81
EWSR1-206ENST00000397938 A0A0G2JLW4 131 aa20.11■□□□□ 0.81
EWSR1-206ENST00000397938 IKBKBO14920 756 aa20.11■□□□□ 0.81
EWSR1-206ENST00000397938 FANCCQ00597 558 aa20.11■□□□□ 0.81
EWSR1-206ENST00000397938 TMCO3Q6UWJ1 677 aa20.11■□□□□ 0.81
EWSR1-206ENST00000397938 KCNH5Q8NCM2 988 aa20.11■□□□□ 0.81
EWSR1-206ENST00000397938 FMNL2Q96PY5 1086 aa20.11■□□□□ 0.81
EWSR1-206ENST00000397938 LMTK3Q96Q04 1460 aa20.11■□□□□ 0.81
EWSR1-206ENST00000397938 SPTLC2O15270 562 aa20.1■□□□□ 0.81
EWSR1-206ENST00000397938 GORABQ5T7V8 394 aa20.1■□□□□ 0.81
EWSR1-206ENST00000397938 TRIM65Q6PJ69 517 aa20.1■□□□□ 0.81
EWSR1-206ENST00000397938 SRRTQ9BXP5 876 aaKnown RBP20.1■□□□□ 0.81
EWSR1-206ENST00000397938 ZNF202O95125 648 aa20.1■□□□□ 0.81
EWSR1-206ENST00000397938 MYL6BP14649 208 aa20.1■□□□□ 0.81
EWSR1-206ENST00000397938 KCNA6P17658 529 aa20.1■□□□□ 0.81
EWSR1-206ENST00000397938 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.1■□□□□ 0.81
EWSR1-206ENST00000397938 AFDNP55196 1824 aaKnown RBP20.1■□□□□ 0.81
EWSR1-206ENST00000397938 TADA3O75528 432 aa20.1■□□□□ 0.81
EWSR1-206ENST00000397938 LMOD1P29536 600 aaPredicted RBP20.09■□□□□ 0.81
EWSR1-206ENST00000397938 EVCP57679 992 aa20.09■□□□□ 0.81
EWSR1-206ENST00000397938 ZMYM1Q5SVZ6 1142 aa20.09■□□□□ 0.81
EWSR1-206ENST00000397938 COPS6Q7L5N1 327 aa20.09■□□□□ 0.81
EWSR1-206ENST00000397938 CHST3Q7LGC8 479 aa20.09■□□□□ 0.81
EWSR1-206ENST00000397938 HSD3B7Q9H2F3 369 aa20.09■□□□□ 0.81
EWSR1-206ENST00000397938 HSPD1P10809 573 aaKnown RBP20.09■□□□□ 0.81
EWSR1-206ENST00000397938 MYSM1Q5VVJ2 828 aa20.09■□□□□ 0.81
EWSR1-206ENST00000397938 OTUD7BQ6GQQ9 843 aa20.09■□□□□ 0.81
EWSR1-206ENST00000397938 FBXL16Q8N461 479 aa20.09■□□□□ 0.81
EWSR1-206ENST00000397938 MNS1Q8NEH6 495 aa20.09■□□□□ 0.81
EWSR1-206ENST00000397938 CAMTA1Q9Y6Y1 1673 aa20.08■□□□□ 0.81
EWSR1-206ENST00000397938 TULP2O00295 520 aa20.08■□□□□ 0.81
EWSR1-206ENST00000397938 GOLIM4O00461 696 aa20.08■□□□□ 0.81
EWSR1-206ENST00000397938 FANCGO15287 622 aa20.08■□□□□ 0.81
EWSR1-206ENST00000397938 C8orf76Q96K31 380 aa20.08■□□□□ 0.81
EWSR1-206ENST00000397938 TMX1Q9H3N1 280 aa20.08■□□□□ 0.81
EWSR1-206ENST00000397938 PAG1Q9NWQ8 432 aa20.08■□□□□ 0.81
EWSR1-206ENST00000397938 POLR3DP05423 398 aaPredicted RBP20.08■□□□□ 0.8
EWSR1-206ENST00000397938 PSME1Q06323 249 aa20.08■□□□□ 0.8
EWSR1-206ENST00000397938 BRAPQ7Z569 592 aa20.08■□□□□ 0.8
EWSR1-206ENST00000397938 ATP1A3P13637 1013 aa20.07■□□□□ 0.8
EWSR1-206ENST00000397938 TICAM2Q86XR7 235 aa20.07■□□□□ 0.8
EWSR1-206ENST00000397938 EFCAB8A8MWE9 144 aa20.07■□□□□ 0.8
EWSR1-206ENST00000397938 PFKFB1P16118 471 aa20.07■□□□□ 0.8
EWSR1-206ENST00000397938 AXDND1Q5T1B0 1012 aaPredicted RBP20.07■□□□□ 0.8
EWSR1-206ENST00000397938 UBE3BQ7Z3V4 1068 aa20.07■□□□□ 0.8
EWSR1-206ENST00000397938 REXO1L1PQ8IX06 675 aa20.07■□□□□ 0.8
EWSR1-206ENST00000397938 ATP8B1O43520 1251 aa20.06■□□□□ 0.8
EWSR1-206ENST00000397938 CMA1P23946 247 aa20.06■□□□□ 0.8
EWSR1-206ENST00000397938 LRRFIP1Q32MZ4 808 aaKnown RBP20.06■□□□□ 0.8
EWSR1-206ENST00000397938 FBXO18Q8NFZ0 1043 aa20.06■□□□□ 0.8
EWSR1-206ENST00000397938 PARP3Q9Y6F1 533 aa20.06■□□□□ 0.8
EWSR1-206ENST00000397938 MAST3O60307 1309 aa20.06■□□□□ 0.8
EWSR1-206ENST00000397938 CBFA2T2O43439 604 aa20.06■□□□□ 0.8
EWSR1-206ENST00000397938 URI1O94763 535 aaPredicted RBP20.06■□□□□ 0.8
EWSR1-206ENST00000397938 TPM1P09493 284 aa20.06■□□□□ 0.8
EWSR1-206ENST00000397938 CEBPAP49715 358 aaPredicted RBP20.06■□□□□ 0.8
EWSR1-206ENST00000397938 CCDC158Q5M9N0 1113 aa20.06■□□□□ 0.8
EWSR1-206ENST00000397938 ZNF790Q6PG37 636 aa20.06■□□□□ 0.8
EWSR1-206ENST00000397938 FCHSD1Q86WN1 690 aa20.06■□□□□ 0.8
EWSR1-206ENST00000397938 MROH7-TTC4A0A0A0MT08 1334 aa20.06■□□□□ 0.8
EWSR1-206ENST00000397938 HNRNPH2P55795 449 aaKnown RBP20.05■□□□□ 0.8
EWSR1-206ENST00000397938 TEX35Q5T0J7 233 aa20.05■□□□□ 0.8
EWSR1-206ENST00000397938 ANKRD13DQ6ZTN6 518 aa20.05■□□□□ 0.8
EWSR1-206ENST00000397938 DPF2Q92785 391 aa20.05■□□□□ 0.8
EWSR1-206ENST00000397938 CARD6Q9BX69 1037 aa20.05■□□□□ 0.8
EWSR1-206ENST00000397938 UBXN6Q9BZV1 441 aa20.05■□□□□ 0.8
EWSR1-206ENST00000397938 CCDC9Q9Y3X0 531 aaKnown RBP20.05■□□□□ 0.8
EWSR1-206ENST00000397938 UBASH3AP57075 661 aa20.05■□□□□ 0.8
EWSR1-206ENST00000397938 ANO1Q5XXA6 986 aa20.05■□□□□ 0.8
EWSR1-206ENST00000397938 TUBE1Q9UJT0 475 aa20.05■□□□□ 0.8
EWSR1-206ENST00000397938 SLC39A6Q13433 755 aa20.04■□□□□ 0.8
EWSR1-206ENST00000397938 GPHNQ9NQX3 736 aaPredicted RBP20.04■□□□□ 0.8
EWSR1-206ENST00000397938 SLIT3O75094 1523 aa20.04■□□□□ 0.8
EWSR1-206ENST00000397938 CDK11BP21127 795 aaKnown RBP20.04■□□□□ 0.8
EWSR1-206ENST00000397938 SYNE3Q6ZMZ3 975 aa20.04■□□□□ 0.8
EWSR1-206ENST00000397938 LRP10Q7Z4F1 713 aa20.04■□□□□ 0.8
EWSR1-206ENST00000397938 KIF28PB7ZC32 967 aa20.03■□□□□ 0.8
EWSR1-206ENST00000397938 SEC31AO94979 1220 aaKnown RBP20.03■□□□□ 0.8
EWSR1-206ENST00000397938 MYL5Q02045 173 aa20.03■□□□□ 0.8
EWSR1-206ENST00000397938 SLC20A2Q08357 652 aa20.03■□□□□ 0.8
EWSR1-206ENST00000397938 VSTM4Q8IW00 320 aa20.03■□□□□ 0.8
EWSR1-206ENST00000397938 UTP14AQ9BVJ6 771 aaKnown RBP20.03■□□□□ 0.8
EWSR1-206ENST00000397938 ARFGEF2Q9Y6D5 1785 aa20.03■□□□□ 0.8
EWSR1-206ENST00000397938 ZSCAN12O43309 604 aa20.03■□□□□ 0.8
EWSR1-206ENST00000397938 SERPINC1P01008 464 aa20.03■□□□□ 0.8
EWSR1-206ENST00000397938 TTLL5Q6EMB2 1281 aa20.03■□□□□ 0.8
EWSR1-206ENST00000397938 ISM2Q6H9L7 571 aa20.03■□□□□ 0.8
EWSR1-206ENST00000397938 ANKRD24Q8TF21 1146 aa20.03■□□□□ 0.8
EWSR1-206ENST00000397938 DDX60Q8IY21 1712 aaKnown RBP20.02■□□□□ 0.8
EWSR1-206ENST00000397938 NWD2Q9ULI1 1742 aa20.02■□□□□ 0.8
EWSR1-206ENST00000397938 SPEF2Q9C093 1822 aa20.02■□□□□ 0.8
EWSR1-206ENST00000397938 VWA3AA6NCI4 1184 aa20.02■□□□□ 0.8
EWSR1-206ENST00000397938 RNF113AO15541 343 aaKnown RBP20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms