RNA–Protein interactions for RNA: ENST00000396247.7

RDH13-202, Transcript of retinol dehydrogenase 13, humanhuman

TSL 1 (best) BASIC

Gene RDH13, Length 1,987 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-202ENST00000396247 MAP3K12Q12852 859 aa20.17■□□□□ 0.82
RDH13-202ENST00000396247 GRAPQ13588 217 aa20.17■□□□□ 0.82
RDH13-202ENST00000396247 GRAPLQ8TC17 118 aaPredicted RBP20.17■□□□□ 0.82
RDH13-202ENST00000396247 WWC3Q9ULE0 1092 aa20.17■□□□□ 0.82
RDH13-202ENST00000396247 ZNF532Q9HCE3 1301 aa20.16■□□□□ 0.82
RDH13-202ENST00000396247 POLRMTO00411 1230 aaKnown RBP20.16■□□□□ 0.82
RDH13-202ENST00000396247 GPAA1O43292 621 aa20.16■□□□□ 0.82
RDH13-202ENST00000396247 NUCB2P80303 420 aa20.16■□□□□ 0.82
RDH13-202ENST00000396247 TNPO1Q92973 898 aaKnown RBP20.16■□□□□ 0.82
RDH13-202ENST00000396247 VPS37DQ86XT2 251 aa20.15■□□□□ 0.82
RDH13-202ENST00000396247 FLAD1Q8NFF5 587 aa20.15■□□□□ 0.82
RDH13-202ENST00000396247 RPGRQ92834 1020 aaKnown RBP20.15■□□□□ 0.82
RDH13-202ENST00000396247 FAM84BQ96KN1 310 aaPredicted RBP20.15■□□□□ 0.82
RDH13-202ENST00000396247 NEK1Q96PY6 1258 aa20.15■□□□□ 0.82
RDH13-202ENST00000396247 ISY1Q9ULR0 285 aaKnown RBP20.15■□□□□ 0.82
RDH13-202ENST00000396247 MYO5AQ9Y4I1 1855 aaKnown RBP20.15■□□□□ 0.82
RDH13-202ENST00000396247 TCRBV5S4A2TA0A5A2 114 aa20.15■□□□□ 0.82
RDH13-202ENST00000396247 CRY2Q49AN0 593 aa20.15■□□□□ 0.82
RDH13-202ENST00000396247 COL23A1Q86Y22 540 aaPredicted RBP20.15■□□□□ 0.82
RDH13-202ENST00000396247 ALDH8A1Q9H2A2 487 aaPredicted RBP20.15■□□□□ 0.82
RDH13-202ENST00000396247 CTNNA3Q9UI47 895 aa20.15■□□□□ 0.82
RDH13-202ENST00000396247 IQSEC3Q9UPP2 1182 aaPredicted RBP20.15■□□□□ 0.82
RDH13-202ENST00000396247 DOCK2Q92608 1830 aa20.14■□□□□ 0.82
RDH13-202ENST00000396247 FOXP2O15409 715 aa20.14■□□□□ 0.81
RDH13-202ENST00000396247 COL9A3Q14050 684 aaPredicted RBP20.14■□□□□ 0.81
RDH13-202ENST00000396247 NLGN1Q8N2Q7 840 aa20.14■□□□□ 0.81
RDH13-202ENST00000396247 ZSCAN31Q96LW9 406 aaPredicted RBP20.14■□□□□ 0.81
RDH13-202ENST00000396247 LARP6Q9BRS8 491 aaKnown RBP20.14■□□□□ 0.81
RDH13-202ENST00000396247 TNS1Q9HBL0 1735 aaKnown RBP20.14■□□□□ 0.81
RDH13-202ENST00000396247 TRAK2O60296 914 aa20.14■□□□□ 0.81
RDH13-202ENST00000396247 ANKRD1Q15327 319 aa20.14■□□□□ 0.81
RDH13-202ENST00000396247 FBXO33Q7Z6M2 555 aa20.13■□□□□ 0.81
RDH13-202ENST00000396247 MAGEB6Q8N7X4 407 aa20.13■□□□□ 0.81
RDH13-202ENST00000396247 FBXO41Q8TF61 875 aa20.13■□□□□ 0.81
RDH13-202ENST00000396247 SH2B1Q9NRF2 756 aaPredicted RBP20.13■□□□□ 0.81
RDH13-202ENST00000396247 STOX1Q6ZVD7 989 aa20.12■□□□□ 0.81
RDH13-202ENST00000396247 LRP2BPQ9P2M1 347 aa20.12■□□□□ 0.81
RDH13-202ENST00000396247 DENND2AQ9ULE3 1009 aa20.12■□□□□ 0.81
RDH13-202ENST00000396247 FGAP02671 866 aa20.12■□□□□ 0.81
RDH13-202ENST00000396247 HMGB1P09429 215 aaKnown RBP20.12■□□□□ 0.81
RDH13-202ENST00000396247 PTMSP20962 102 aa20.12■□□□□ 0.81
RDH13-202ENST00000396247 KLRK1P26718 216 aa20.12■□□□□ 0.81
RDH13-202ENST00000396247 TTLL5Q6EMB2 1281 aa20.12■□□□□ 0.81
RDH13-202ENST00000396247 RBM17Q96I25 401 aaKnown RBP20.12■□□□□ 0.81
RDH13-202ENST00000396247 TCEANC2Q96MN5 208 aa20.12■□□□□ 0.81
RDH13-202ENST00000396247 RGPD3A6NKT7 1758 aaPredicted RBP20.11■□□□□ 0.81
RDH13-202ENST00000396247 RGPD4Q7Z3J3 1758 aa20.11■□□□□ 0.81
RDH13-202ENST00000396247 SEMA3EO15041 775 aa20.11■□□□□ 0.81
RDH13-202ENST00000396247 IMMTQ16891 758 aaKnown RBP20.11■□□□□ 0.81
RDH13-202ENST00000396247 AIDAQ96BJ3 306 aa20.11■□□□□ 0.81
RDH13-202ENST00000396247 GBP4Q96PP9 640 aa20.11■□□□□ 0.81
RDH13-202ENST00000396247 ANKIB1Q9P2G1 1089 aa20.11■□□□□ 0.81
RDH13-202ENST00000396247 A0A0G2JLW4 131 aa20.1■□□□□ 0.81
RDH13-202ENST00000396247 LARGE1O95461 756 aa20.1■□□□□ 0.81
RDH13-202ENST00000396247 HIBADHP31937 336 aaKnown RBP20.1■□□□□ 0.81
RDH13-202ENST00000396247 COL1A1P02452 1464 aaPredicted RBP20.1■□□□□ 0.81
RDH13-202ENST00000396247 E7EWF7 191 aa20.1■□□□□ 0.81
RDH13-202ENST00000396247 XRCC6P12956 609 aaKnown RBP eCLIP20.1■□□□□ 0.81
RDH13-202ENST00000396247 TOB2Q14106 344 aaPredicted RBP20.1■□□□□ 0.81
RDH13-202ENST00000396247 TPCN1Q9ULQ1 816 aa20.1■□□□□ 0.81
RDH13-202ENST00000396247 LEMD3Q9Y2U8 911 aa20.1■□□□□ 0.81
RDH13-202ENST00000396247 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.1■□□□□ 0.81
RDH13-202ENST00000396247 KLRG2A4D1S0 409 aaPredicted RBP20.09■□□□□ 0.81
RDH13-202ENST00000396247 HOXA10P31260 410 aaPredicted RBP20.09■□□□□ 0.81
RDH13-202ENST00000396247 MRE11P49959 708 aa20.09■□□□□ 0.81
RDH13-202ENST00000396247 PKP1Q13835 747 aa20.09■□□□□ 0.81
RDH13-202ENST00000396247 STRBPQ96SI9 672 aaKnown RBP20.09■□□□□ 0.81
RDH13-202ENST00000396247 ABCF2Q9UG63 623 aa20.09■□□□□ 0.81
RDH13-202ENST00000396247 XDHP47989 1333 aa20.09■□□□□ 0.81
RDH13-202ENST00000396247 ME3Q16798 604 aa20.08■□□□□ 0.81
RDH13-202ENST00000396247 PNPLA7Q6ZV29 1317 aa20.08■□□□□ 0.81
RDH13-202ENST00000396247 PDS5AQ29RF7 1337 aaKnown RBP20.08■□□□□ 0.8
RDH13-202ENST00000396247 MBD4O95243 580 aa20.08■□□□□ 0.8
RDH13-202ENST00000396247 DHX32Q7L7V1 743 aaKnown RBP20.08■□□□□ 0.8
RDH13-202ENST00000396247 IRS2Q9Y4H2 1338 aa20.07■□□□□ 0.8
RDH13-202ENST00000396247 BBOX1O75936 387 aa20.07■□□□□ 0.8
RDH13-202ENST00000396247 APPP05067 770 aa20.07■□□□□ 0.8
RDH13-202ENST00000396247 CLEC17AQ6ZS10 378 aa20.07■□□□□ 0.8
RDH13-202ENST00000396247 CCDC83Q8IWF9 413 aa20.07■□□□□ 0.8
RDH13-202ENST00000396247 CRAMP1Q96RY5 1269 aa20.07■□□□□ 0.8
RDH13-202ENST00000396247 RAI14Q9P0K7 980 aa20.07■□□□□ 0.8
RDH13-202ENST00000396247 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.07■□□□□ 0.8
RDH13-202ENST00000396247 ZNF213O14771 459 aa20.06■□□□□ 0.8
RDH13-202ENST00000396247 HAND2P61296 217 aa20.06■□□□□ 0.8
RDH13-202ENST00000396247 Q6ZUG5 572 aa20.06■□□□□ 0.8
RDH13-202ENST00000396247 TXNRD3Q86VQ6 643 aa20.06■□□□□ 0.8
RDH13-202ENST00000396247 BRIP1Q9BX63 1249 aa20.06■□□□□ 0.8
RDH13-202ENST00000396247 SLC51AQ86UW1 340 aa20.06■□□□□ 0.8
RDH13-202ENST00000396247 ARMT1Q9H993 441 aa20.06■□□□□ 0.8
RDH13-202ENST00000396247 SMC3Q9UQE7 1217 aa20.06■□□□□ 0.8
RDH13-202ENST00000396247 ZDHHC9Q9Y397 364 aa20.06■□□□□ 0.8
RDH13-202ENST00000396247 ZBTB22O15209 634 aa20.05■□□□□ 0.8
RDH13-202ENST00000396247 MMP10P09238 476 aa20.05■□□□□ 0.8
RDH13-202ENST00000396247 CYP7A1P22680 504 aa20.05■□□□□ 0.8
RDH13-202ENST00000396247 EXOSC10Q01780 885 aaKnown RBP20.05■□□□□ 0.8
RDH13-202ENST00000396247 SKOR2Q2VWA4 1001 aaPredicted RBP20.05■□□□□ 0.8
RDH13-202ENST00000396247 PARP3Q9Y6F1 533 aa20.05■□□□□ 0.8
RDH13-202ENST00000396247 LAMA4Q16363 1823 aa20.05■□□□□ 0.8
RDH13-202ENST00000396247 PATL2C9JE40 543 aaKnown RBP20.04■□□□□ 0.8
RDH13-202ENST00000396247 GPSM2P81274 684 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms