RNA–Protein interactions for RNA: ENST00000396215.7

LDHC-202, Transcript of lactate dehydrogenase C, humanhuman

TSL 1 (best)

Gene LDHC, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-202ENST00000396215 PDE8AO60658 829 aa12.59□□□□□ -0.39
LDHC-202ENST00000396215 USP2O75604 605 aaPredicted RBP12.59□□□□□ -0.39
LDHC-202ENST00000396215 HOXB7P09629 217 aa12.59□□□□□ -0.39
LDHC-202ENST00000396215 SUPT20HL1Q3ZLR7 823 aa12.59□□□□□ -0.39
LDHC-202ENST00000396215 ANKRD18AQ8IVF6 992 aa12.59□□□□□ -0.39
LDHC-202ENST00000396215 SHISA4Q96DD7 197 aa12.59□□□□□ -0.39
LDHC-202ENST00000396215 ZNF804BA4D1E1 1349 aa12.59□□□□□ -0.39
LDHC-202ENST00000396215 ECM29Q5VYK3 1845 aa12.58□□□□□ -0.4
LDHC-202ENST00000396215 WTIPA6NIX2 430 aaPredicted RBP12.58□□□□□ -0.4
LDHC-202ENST00000396215 GNRH1P01148 92 aa12.58□□□□□ -0.4
LDHC-202ENST00000396215 PCCAP05165 728 aaPredicted RBP12.58□□□□□ -0.4
LDHC-202ENST00000396215 VCANP13611 3396 aa12.58□□□□□ -0.4
LDHC-202ENST00000396215 IREB2P48200 963 aaKnown RBP12.58□□□□□ -0.4
LDHC-202ENST00000396215 PRMT2P55345 433 aa12.58□□□□□ -0.4
LDHC-202ENST00000396215 TTLL5Q6EMB2 1281 aa12.58□□□□□ -0.4
LDHC-202ENST00000396215 ANKRD13AQ8IZ07 590 aa12.58□□□□□ -0.4
LDHC-202ENST00000396215 DPF3Q92784 378 aa12.58□□□□□ -0.4
LDHC-202ENST00000396215 BSDC1Q9NW68 430 aaPredicted RBP12.58□□□□□ -0.4
LDHC-202ENST00000396215 HYPKQ9NX55 129 aa12.58□□□□□ -0.4
LDHC-202ENST00000396215 DBF4Q9UBU7 674 aaPredicted RBP12.58□□□□□ -0.4
LDHC-202ENST00000396215 MINPP1Q9UNW1 487 aa12.58□□□□□ -0.4
LDHC-202ENST00000396215 CHL1O00533 1208 aa12.57□□□□□ -0.4
LDHC-202ENST00000396215 CCT4P50991 539 aaKnown RBP12.57□□□□□ -0.4
LDHC-202ENST00000396215 GPR153Q6NV75 609 aa12.57□□□□□ -0.4
LDHC-202ENST00000396215 CCDC191Q8NCU4 936 aa12.57□□□□□ -0.4
LDHC-202ENST00000396215 NKX2-3Q8TAU0 364 aa12.57□□□□□ -0.4
LDHC-202ENST00000396215 ZFYVE28Q9HCC9 887 aa12.57□□□□□ -0.4
LDHC-202ENST00000396215 MAPK8IP3Q9UPT6 1336 aa12.57□□□□□ -0.4
LDHC-202ENST00000396215 SPTBN5Q9NRC6 3674 aaKnown RBP12.56□□□□□ -0.4
LDHC-202ENST00000396215 RIPK4P57078 832 aa12.56□□□□□ -0.4
LDHC-202ENST00000396215 HDGFL1Q5TGJ6 251 aa12.56□□□□□ -0.4
LDHC-202ENST00000396215 KIAA0825Q8IV33 1275 aa12.56□□□□□ -0.4
LDHC-202ENST00000396215 SH3TC2Q8TF17 1288 aa12.56□□□□□ -0.4
LDHC-202ENST00000396215 BRI3BPQ8WY22 251 aa12.56□□□□□ -0.4
LDHC-202ENST00000396215 CDC5LQ99459 802 aaKnown RBP12.56□□□□□ -0.4
LDHC-202ENST00000396215 HTATIP2Q9BUP3 242 aa12.56□□□□□ -0.4
LDHC-202ENST00000396215 LEMD3Q9Y2U8 911 aa12.56□□□□□ -0.4
LDHC-202ENST00000396215 NR2E3Q9Y5X4 410 aa12.56□□□□□ -0.4
LDHC-202ENST00000396215 ZBTB7BO15156 539 aaPredicted RBP12.55□□□□□ -0.4
LDHC-202ENST00000396215 GJA8P48165 433 aa12.55□□□□□ -0.4
LDHC-202ENST00000396215 LMOD3Q0VAK6 560 aa12.55□□□□□ -0.4
LDHC-202ENST00000396215 DLGAP5Q15398 846 aa12.55□□□□□ -0.4
LDHC-202ENST00000396215 TAF1CQ15572 869 aaPredicted RBP12.55□□□□□ -0.4
LDHC-202ENST00000396215 KRT24Q2M2I5 525 aa12.55□□□□□ -0.4
LDHC-202ENST00000396215 NBPF12Q5TAG4 269 aaPredicted RBP12.55□□□□□ -0.4
LDHC-202ENST00000396215 TXNRD3Q86VQ6 643 aa12.55□□□□□ -0.4
LDHC-202ENST00000396215 ZCCHC17Q9NP64 241 aaKnown RBP12.55□□□□□ -0.4
LDHC-202ENST00000396215 SOX1O00570 391 aaPredicted RBP12.54□□□□□ -0.4
LDHC-202ENST00000396215 TLR2O60603 784 aa12.54□□□□□ -0.4
LDHC-202ENST00000396215 GTF2A2P52657 109 aa12.54□□□□□ -0.4
LDHC-202ENST00000396215 OPTNQ96CV9 577 aa12.54□□□□□ -0.4
LDHC-202ENST00000396215 OTOFQ9HC10 1997 aa12.54□□□□□ -0.4
LDHC-202ENST00000396215 GJB1P08034 283 aa12.53□□□□□ -0.4
LDHC-202ENST00000396215 CAPN2P17655 700 aa12.53□□□□□ -0.4
LDHC-202ENST00000396215 LACTBP83111 547 aaPredicted RBP12.53□□□□□ -0.4
LDHC-202ENST00000396215 MTFR1Q15390 333 aa12.53□□□□□ -0.4
LDHC-202ENST00000396215 FBXW7Q969H0 707 aa12.53□□□□□ -0.4
LDHC-202ENST00000396215 CCL15-CCL14A0A0B4J2E2 113 aa12.52□□□□□ -0.41
LDHC-202ENST00000396215 MYO1BO43795 1136 aa12.52□□□□□ -0.41
LDHC-202ENST00000396215 MYCP01106 439 aaPredicted RBP12.52□□□□□ -0.41
LDHC-202ENST00000396215 CD44P16070 742 aaKnown RBP12.52□□□□□ -0.41
LDHC-202ENST00000396215 TMPOP42166 694 aaKnown RBP12.52□□□□□ -0.41
LDHC-202ENST00000396215 FKBP1AP62942 108 aaKnown RBP12.52□□□□□ -0.41
LDHC-202ENST00000396215 GTF2IP78347 998 aa12.52□□□□□ -0.41
LDHC-202ENST00000396215 KIF22Q14807 665 aa12.52□□□□□ -0.41
LDHC-202ENST00000396215 CCL15Q16663 113 aa12.52□□□□□ -0.41
LDHC-202ENST00000396215 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.52□□□□□ -0.41
LDHC-202ENST00000396215 RIC3Q7Z5B4 369 aa12.52□□□□□ -0.41
LDHC-202ENST00000396215 FAM43AQ8N2R8 423 aa12.52□□□□□ -0.41
LDHC-202ENST00000396215 TTLL11Q8NHH1 800 aa12.52□□□□□ -0.41
LDHC-202ENST00000396215 LRCH3Q96II8 777 aa12.52□□□□□ -0.41
LDHC-202ENST00000396215 CCDC85AQ96PX6 553 aaPredicted RBP12.52□□□□□ -0.41
LDHC-202ENST00000396215 PCGF6Q9BYE7 350 aa12.52□□□□□ -0.41
LDHC-202ENST00000396215 ARHGAP39Q9C0H5 1083 aa12.52□□□□□ -0.41
LDHC-202ENST00000396215 ELP3Q9H9T3 547 aa12.52□□□□□ -0.41
LDHC-202ENST00000396215 CWC25Q9NXE8 425 aaPredicted RBP12.52□□□□□ -0.41
LDHC-202ENST00000396215 WDHD1O75717 1129 aaPredicted RBP12.51□□□□□ -0.41
LDHC-202ENST00000396215 CTSWP56202 376 aa12.51□□□□□ -0.41
LDHC-202ENST00000396215 GOLGA2Q08379 1002 aa12.51□□□□□ -0.41
LDHC-202ENST00000396215 RASA3Q14644 834 aa12.51□□□□□ -0.41
LDHC-202ENST00000396215 CERS5Q8N5B7 392 aa12.51□□□□□ -0.41
LDHC-202ENST00000396215 HELBQ8NG08 1087 aaPredicted RBP12.51□□□□□ -0.41
LDHC-202ENST00000396215 PRMT6Q96LA8 375 aaPredicted RBP12.51□□□□□ -0.41
LDHC-202ENST00000396215 CD209Q9NNX6 404 aa12.51□□□□□ -0.41
LDHC-202ENST00000396215 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.51□□□□□ -0.41
LDHC-202ENST00000396215 STXBP5LQ9Y2K9 1186 aa12.51□□□□□ -0.41
LDHC-202ENST00000396215 ZSWIM8A7E2V4 1837 aa12.51□□□□□ -0.41
LDHC-202ENST00000396215 LAMA2P24043 3122 aaKnown RBP12.51□□□□□ -0.41
LDHC-202ENST00000396215 MYH3P11055 1940 aa12.5□□□□□ -0.41
LDHC-202ENST00000396215 BMP8BP34820 402 aa12.5□□□□□ -0.41
LDHC-202ENST00000396215 CFAP100Q494V2 611 aa12.5□□□□□ -0.41
LDHC-202ENST00000396215 C15orf52Q6ZUT6 534 aaKnown RBP12.5□□□□□ -0.41
LDHC-202ENST00000396215 MYD88Q99836 296 aa12.5□□□□□ -0.41
LDHC-202ENST00000396215 ANKRD2Q9GZV1 360 aa12.5□□□□□ -0.41
LDHC-202ENST00000396215 SRRDQ9UH36 339 aa12.5□□□□□ -0.41
LDHC-202ENST00000396215 PCDHAC2Q9Y5I4 1007 aa12.5□□□□□ -0.41
LDHC-202ENST00000396215 IRS2Q9Y4H2 1338 aa12.5□□□□□ -0.41
LDHC-202ENST00000396215 CLRN2A0PK11 232 aa12.49□□□□□ -0.41
LDHC-202ENST00000396215 KLRK1P26718 216 aa12.49□□□□□ -0.41
LDHC-202ENST00000396215 MAP3K9P80192 1104 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms