RNA–Protein interactions for RNA: ENST00000395980.6

BDNF-204, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-204ENST00000395980 ARFGEF2Q9Y6D5 1785 aa10.09□□□□□ -0.79
BDNF-204ENST00000395980 SPTLC2O15270 562 aa10.09□□□□□ -0.79
BDNF-204ENST00000395980 FDPSP14324 419 aaKnown RBP10.09□□□□□ -0.79
BDNF-204ENST00000395980 COPS6Q7L5N1 327 aa10.09□□□□□ -0.79
BDNF-204ENST00000395980 LRP10Q7Z4F1 713 aa10.09□□□□□ -0.79
BDNF-204ENST00000395980 DDX60Q8IY21 1712 aaKnown RBP10.08□□□□□ -0.8
BDNF-204ENST00000395980 A0A1B0GVL5 298 aa10.08□□□□□ -0.8
BDNF-204ENST00000395980 CMA1P23946 247 aa10.08□□□□□ -0.8
BDNF-204ENST00000395980 CLCN6P51797 869 aa10.08□□□□□ -0.8
BDNF-204ENST00000395980 PSME1Q06323 249 aa10.08□□□□□ -0.8
BDNF-204ENST00000395980 ERCC6LQ2NKX8 1250 aa10.08□□□□□ -0.8
BDNF-204ENST00000395980 ANKRD24Q8TF21 1146 aa10.08□□□□□ -0.8
BDNF-204ENST00000395980 FHOD1Q9Y613 1164 aa10.08□□□□□ -0.8
BDNF-204ENST00000395980 HSPD1P10809 573 aaKnown RBP10.08□□□□□ -0.8
BDNF-204ENST00000395980 FOSBP53539 338 aa10.08□□□□□ -0.8
BDNF-204ENST00000395980 MYSM1Q5VVJ2 828 aa10.08□□□□□ -0.8
BDNF-204ENST00000395980 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.08□□□□□ -0.8
BDNF-204ENST00000395980 NOL10Q9BSC4 688 aaKnown RBP10.08□□□□□ -0.8
BDNF-204ENST00000395980 NCOA5Q9HCD5 579 aaKnown RBP10.08□□□□□ -0.8
BDNF-204ENST00000395980 A0A087WWV3 80 aa10.08□□□□□ -0.8
BDNF-204ENST00000395980 ZRANB2O95218 330 aaKnown RBP eCLIP10.08□□□□□ -0.8
BDNF-204ENST00000395980 CASP7P55210 303 aa10.08□□□□□ -0.8
BDNF-204ENST00000395980 FBXO18Q8NFZ0 1043 aa10.08□□□□□ -0.8
BDNF-204ENST00000395980 C8orf76Q96K31 380 aa10.08□□□□□ -0.8
BDNF-204ENST00000395980 SLC52A2Q9HAB3 445 aa10.08□□□□□ -0.8
BDNF-204ENST00000395980 WDR19Q8NEZ3 1342 aa10.07□□□□□ -0.8
BDNF-204ENST00000395980 KIF1AQ12756 1690 aa10.07□□□□□ -0.8
BDNF-204ENST00000395980 ZNF202O95125 648 aa10.07□□□□□ -0.8
BDNF-204ENST00000395980 PNMA6AP0CW24 399 aaPredicted RBP10.07□□□□□ -0.8
BDNF-204ENST00000395980 FANCCQ00597 558 aa10.07□□□□□ -0.8
BDNF-204ENST00000395980 LRRFIP1Q32MZ4 808 aaKnown RBP10.07□□□□□ -0.8
BDNF-204ENST00000395980 TMX1Q9H3N1 280 aa10.07□□□□□ -0.8
BDNF-204ENST00000395980 DNAI1Q9UI46 699 aa10.07□□□□□ -0.8
BDNF-204ENST00000395980 TUBE1Q9UJT0 475 aa10.07□□□□□ -0.8
BDNF-204ENST00000395980 CYP2C19P33261 490 aa10.07□□□□□ -0.8
BDNF-204ENST00000395980 ORC3Q9UBD5 711 aaPredicted RBP10.07□□□□□ -0.8
BDNF-204ENST00000395980 MAST3O60307 1309 aa10.07□□□□□ -0.8
BDNF-204ENST00000395980 KDM6AO15550 1401 aaPredicted RBP10.07□□□□□ -0.8
BDNF-204ENST00000395980 RNF113AO15541 343 aaKnown RBP10.07□□□□□ -0.8
BDNF-204ENST00000395980 GCP02774 474 aa10.07□□□□□ -0.8
BDNF-204ENST00000395980 GUCY1B3Q02153 619 aa10.07□□□□□ -0.8
BDNF-204ENST00000395980 ARHGAP29Q52LW3 1261 aa10.07□□□□□ -0.8
BDNF-204ENST00000395980 AXDND1Q5T1B0 1012 aaPredicted RBP10.07□□□□□ -0.8
BDNF-204ENST00000395980 UBE3BQ7Z3V4 1068 aa10.07□□□□□ -0.8
BDNF-204ENST00000395980 UBXN4Q92575 508 aa10.07□□□□□ -0.8
BDNF-204ENST00000395980 CLIC4Q9Y696 253 aa10.07□□□□□ -0.8
BDNF-204ENST00000395980 NDUFB9Q9Y6M9 179 aa10.07□□□□□ -0.8
BDNF-204ENST00000395980 FAM237AA0A1B0GTK4 181 aa10.06□□□□□ -0.8
BDNF-204ENST00000395980 GOLGA6L9A6NEM1 432 aa10.06□□□□□ -0.8
BDNF-204ENST00000395980 EFCAB8A8MWE9 144 aa10.06□□□□□ -0.8
BDNF-204ENST00000395980 GOLIM4O00461 696 aa10.06□□□□□ -0.8
BDNF-204ENST00000395980 CHGBP05060 677 aa10.06□□□□□ -0.8
BDNF-204ENST00000395980 CEBPAP49715 358 aaPredicted RBP10.06□□□□□ -0.8
BDNF-204ENST00000395980 TMCO3Q6UWJ1 677 aa10.06□□□□□ -0.8
BDNF-204ENST00000395980 TADA3O75528 432 aa10.06□□□□□ -0.8
BDNF-204ENST00000395980 MYL6BP14649 208 aa10.06□□□□□ -0.8
BDNF-204ENST00000395980 ANO1Q5XXA6 986 aa10.06□□□□□ -0.8
BDNF-204ENST00000395980 SYNE3Q6ZMZ3 975 aa10.06□□□□□ -0.8
BDNF-204ENST00000395980 HOMER1Q86YM7 354 aa10.06□□□□□ -0.8
BDNF-204ENST00000395980 ERCC4Q92889 916 aaPredicted RBP10.06□□□□□ -0.8
BDNF-204ENST00000395980 LAMB4A4D0S4 1761 aa10.06□□□□□ -0.8
BDNF-204ENST00000395980 ZSCAN12O43309 604 aa10.06□□□□□ -0.8
BDNF-204ENST00000395980 SNRPA1P09661 255 aaKnown RBP10.06□□□□□ -0.8
BDNF-204ENST00000395980 IL15P40933 162 aaPredicted RBP10.06□□□□□ -0.8
BDNF-204ENST00000395980 CCDC158Q5M9N0 1113 aa10.06□□□□□ -0.8
BDNF-204ENST00000395980 TRIM65Q6PJ69 517 aa10.06□□□□□ -0.8
BDNF-204ENST00000395980 MPHOSPH8Q99549 860 aa10.06□□□□□ -0.8
BDNF-204ENST00000395980 PFKFB1P16118 471 aa10.05□□□□□ -0.8
BDNF-204ENST00000395980 MYL5Q02045 173 aa10.05□□□□□ -0.8
BDNF-204ENST00000395980 MNS1Q8NEH6 495 aa10.05□□□□□ -0.8
BDNF-204ENST00000395980 FER1L4A9Z1Z3 1794 aa10.05□□□□□ -0.8
BDNF-204ENST00000395980 SLC39A14Q15043 492 aa10.05□□□□□ -0.8
BDNF-204ENST00000395980 TEX35Q5T0J7 233 aa10.05□□□□□ -0.8
BDNF-204ENST00000395980 JMYQ8N9B5 988 aa10.05□□□□□ -0.8
BDNF-204ENST00000395980 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.05□□□□□ -0.8
BDNF-204ENST00000395980 NAP1L2Q9ULW6 460 aaPredicted RBP10.05□□□□□ -0.8
BDNF-204ENST00000395980 A0A087WZG4 1122 aa10.05□□□□□ -0.8
BDNF-204ENST00000395980 PLA2G4AP47712 749 aa10.05□□□□□ -0.8
BDNF-204ENST00000395980 KIF23Q02241 960 aaPredicted RBP10.05□□□□□ -0.8
BDNF-204ENST00000395980 ATG9AQ7Z3C6 839 aa10.05□□□□□ -0.8
BDNF-204ENST00000395980 VSTM4Q8IW00 320 aa10.05□□□□□ -0.8
BDNF-204ENST00000395980 ELOA2Q8IYF1 753 aaPredicted RBP10.05□□□□□ -0.8
BDNF-204ENST00000395980 HSD3B7Q9H2F3 369 aa10.05□□□□□ -0.8
BDNF-204ENST00000395980 HPSEQ9Y251 543 aa10.05□□□□□ -0.8
BDNF-204ENST00000395980 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.04□□□□□ -0.8
BDNF-204ENST00000395980 ARHGAP6O43182 974 aa10.04□□□□□ -0.8
BDNF-204ENST00000395980 PPP6R2O75170 966 aa10.04□□□□□ -0.8
BDNF-204ENST00000395980 ZFYP08048 801 aaPredicted RBP10.04□□□□□ -0.8
BDNF-204ENST00000395980 PLBD2Q8NHP8 589 aa10.04□□□□□ -0.8
BDNF-204ENST00000395980 UBXN6Q9BZV1 441 aa10.04□□□□□ -0.8
BDNF-204ENST00000395980 MST1RQ04912 1400 aa10.04□□□□□ -0.8
BDNF-204ENST00000395980 C4AP0C0L4 1744 aa10.04□□□□□ -0.8
BDNF-204ENST00000395980 C4BP0C0L5 1744 aa10.04□□□□□ -0.8
BDNF-204ENST00000395980 NWD2Q9ULI1 1742 aa10.04□□□□□ -0.8
BDNF-204ENST00000395980 SLC20A2Q08357 652 aa10.04□□□□□ -0.8
BDNF-204ENST00000395980 IMMTQ16891 758 aaKnown RBP10.04□□□□□ -0.8
BDNF-204ENST00000395980 REXO1L1PQ8IX06 675 aa10.04□□□□□ -0.8
BDNF-204ENST00000395980 MB21D2Q8IYB1 491 aaPredicted RBP10.04□□□□□ -0.8
BDNF-204ENST00000395980 LRRN4CLQ8ND94 238 aa10.04□□□□□ -0.8
BDNF-204ENST00000395980 FBXW7Q969H0 707 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms