RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 TUBB8Q3ZCM7 444 aa4.99□□□□□ -1.61
HERC4-204ENST00000395198 N4BP2L2Q92802 583 aaPredicted RBP4.99□□□□□ -1.61
HERC4-204ENST00000395198 SELENOOQ9BVL4 669 aa4.99□□□□□ -1.61
HERC4-204ENST00000395198 DIAPH3Q9NSV4 1193 aa4.99□□□□□ -1.61
HERC4-204ENST00000395198 FBXO2Q9UK22 296 aaPredicted RBP4.99□□□□□ -1.61
HERC4-204ENST00000395198 SNX5Q9Y5X3 404 aa4.99□□□□□ -1.61
HERC4-204ENST00000395198 WDR62O43379 1518 aa4.99□□□□□ -1.61
HERC4-204ENST00000395198 RASA4O43374 803 aa4.98□□□□□ -1.61
HERC4-204ENST00000395198 ARIH2O95376 493 aa4.98□□□□□ -1.61
HERC4-204ENST00000395198 PGRP06401 933 aa4.98□□□□□ -1.61
HERC4-204ENST00000395198 SSTR3P32745 418 aaPredicted RBP4.98□□□□□ -1.61
HERC4-204ENST00000395198 LRCH2Q5VUJ6 765 aa4.98□□□□□ -1.61
HERC4-204ENST00000395198 DDX12PQ92771 950 aa4.98□□□□□ -1.61
HERC4-204ENST00000395198 KCNN1Q92952 543 aa4.98□□□□□ -1.61
HERC4-204ENST00000395198 DHRS1Q96LJ7 313 aa4.98□□□□□ -1.61
HERC4-204ENST00000395198 SETDB2Q96T68 719 aa4.98□□□□□ -1.61
HERC4-204ENST00000395198 FBXO10Q9UK96 956 aa4.98□□□□□ -1.61
HERC4-204ENST00000395198 BLOC1S6Q9UL45 172 aa4.98□□□□□ -1.61
HERC4-204ENST00000395198 ATP8A1Q9Y2Q0 1164 aa4.98□□□□□ -1.61
HERC4-204ENST00000395198 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.98□□□□□ -1.61
HERC4-204ENST00000395198 LINC00854A0A1B0GVQ3 168 aa4.98□□□□□ -1.61
HERC4-204ENST00000395198 H3BRB1 525 aa4.98□□□□□ -1.61
HERC4-204ENST00000395198 KCNQ2O43526 872 aa4.98□□□□□ -1.61
HERC4-204ENST00000395198 CDC45O75419 566 aa4.98□□□□□ -1.61
HERC4-204ENST00000395198 HNRNPCP07910 306 aaKnown RBP eCLIP4.98□□□□□ -1.612e-7■■■■□ 24.4
HERC4-204ENST00000395198 TMED1Q13445 227 aa4.98□□□□□ -1.61
HERC4-204ENST00000395198 CRTC2Q53ET0 693 aaPredicted RBP4.98□□□□□ -1.61
HERC4-204ENST00000395198 FAM133BQ5BKY9 247 aaKnown RBP4.98□□□□□ -1.61
HERC4-204ENST00000395198 ZC3H12BQ5HYM0 836 aaKnown RBP4.98□□□□□ -1.61
HERC4-204ENST00000395198 SYNE3Q6ZMZ3 975 aa4.98□□□□□ -1.61
HERC4-204ENST00000395198 CPXCR1Q8N123 301 aa4.98□□□□□ -1.61
HERC4-204ENST00000395198 ABTB2Q8N961 1025 aa4.98□□□□□ -1.61
HERC4-204ENST00000395198 GSDMBQ8TAX9 411 aa4.98□□□□□ -1.61
HERC4-204ENST00000395198 RSAD2Q8WXG1 361 aa4.98□□□□□ -1.61
HERC4-204ENST00000395198 TIFAQ96CG3 184 aa4.98□□□□□ -1.61
HERC4-204ENST00000395198 TUT1Q9H6E5 874 aaKnown RBP4.98□□□□□ -1.61
HERC4-204ENST00000395198 RSF1Q96T23 1441 aaPredicted RBP4.98□□□□□ -1.61
HERC4-204ENST00000395198 HSP90AB1P08238 724 aaKnown RBP4.98□□□□□ -1.61
HERC4-204ENST00000395198 GZMAP12544 262 aa4.98□□□□□ -1.61
HERC4-204ENST00000395198 COX10Q12887 443 aa4.98□□□□□ -1.61
HERC4-204ENST00000395198 PDE3BQ13370 1112 aa4.98□□□□□ -1.61
HERC4-204ENST00000395198 ANO1Q5XXA6 986 aa4.98□□□□□ -1.61
HERC4-204ENST00000395198 TAX1BP1Q86VP1 789 aa4.98□□□□□ -1.61
HERC4-204ENST00000395198 NOL10Q9BSC4 688 aaKnown RBP4.98□□□□□ -1.61
HERC4-204ENST00000395198 ZIM2Q9NZV7 527 aa4.98□□□□□ -1.61
HERC4-204ENST00000395198 TMX2Q9Y320 296 aa4.98□□□□□ -1.61
HERC4-204ENST00000395198 DPYSL4O14531 572 aa4.98□□□□□ -1.61
HERC4-204ENST00000395198 F2P00734 622 aa4.98□□□□□ -1.61
HERC4-204ENST00000395198 SLC4A1P02730 911 aa4.98□□□□□ -1.61
HERC4-204ENST00000395198 TSPY4P0CV99 314 aa4.98□□□□□ -1.61
HERC4-204ENST00000395198 TSPY10P0CW01 314 aa4.98□□□□□ -1.61
HERC4-204ENST00000395198 MAP7D1Q3KQU3 841 aa4.98□□□□□ -1.61
HERC4-204ENST00000395198 RABGGTAQ92696 567 aa4.98□□□□□ -1.61
HERC4-204ENST00000395198 GSDMAQ96QA5 445 aa4.98□□□□□ -1.61
HERC4-204ENST00000395198 KIF2CQ99661 725 aa4.98□□□□□ -1.61
HERC4-204ENST00000395198 EMILIN3Q9NT22 766 aa4.98□□□□□ -1.61
HERC4-204ENST00000395198 SNTG2Q9NY99 539 aa4.98□□□□□ -1.61
HERC4-204ENST00000395198 INPP5FQ9Y2H2 1132 aa4.98□□□□□ -1.61
HERC4-204ENST00000395198 EMILIN1Q9Y6C2 1016 aa4.98□□□□□ -1.61
HERC4-204ENST00000395198 V9GYY5 206 aaPredicted RBP4.98□□□□□ -1.61
HERC4-204ENST00000395198 VARSP26640 1264 aaKnown RBP4.97□□□□□ -1.61
HERC4-204ENST00000395198 BIRC3Q13489 604 aa4.97□□□□□ -1.61
HERC4-204ENST00000395198 LAMC2Q13753 1193 aa4.97□□□□□ -1.61
HERC4-204ENST00000395198 DCAF8Q5TAQ9 597 aa4.97□□□□□ -1.61
HERC4-204ENST00000395198 FBXO22Q8NEZ5 403 aa4.97□□□□□ -1.61
HERC4-204ENST00000395198 ZBTB10Q96DT7 871 aa4.97□□□□□ -1.61
HERC4-204ENST00000395198 RTFDC1Q9BY42 306 aaPredicted RBP4.97□□□□□ -1.61
HERC4-204ENST00000395198 KCTD5Q9NXV2 234 aa4.97□□□□□ -1.61
HERC4-204ENST00000395198 DDX41Q9UJV9 622 aaKnown RBP4.97□□□□□ -1.61
HERC4-204ENST00000395198 GTF2A1LQ9UNN4 478 aa4.97□□□□□ -1.61
HERC4-204ENST00000395198 TRPC6Q9Y210 931 aa4.97□□□□□ -1.61
HERC4-204ENST00000395198 MTHFD1P11586 935 aaKnown RBP4.97□□□□□ -1.61
HERC4-204ENST00000395198 RXRGP48443 463 aa4.97□□□□□ -1.61
HERC4-204ENST00000395198 SLMAPQ14BN4 828 aa4.97□□□□□ -1.61
HERC4-204ENST00000395198 CPLX2Q6PUV4 134 aaKnown RBP4.97□□□□□ -1.61
HERC4-204ENST00000395198 ZNF75CPQ92670 426 aaPredicted RBP4.97□□□□□ -1.61
HERC4-204ENST00000395198 TNPO1Q92973 898 aaKnown RBP4.97□□□□□ -1.61
HERC4-204ENST00000395198 TRIM11Q96F44 468 aa4.97□□□□□ -1.61
HERC4-204ENST00000395198 RBM18Q96H35 190 aaKnown RBP4.97□□□□□ -1.61
HERC4-204ENST00000395198 FAM81BQ96LP2 452 aa4.97□□□□□ -1.61
HERC4-204ENST00000395198 NUTM2FA1L443 756 aa4.97□□□□□ -1.61
HERC4-204ENST00000395198 BHMG1C9JSJ3 638 aaPredicted RBP4.97□□□□□ -1.61
HERC4-204ENST00000395198 HPDP32754 393 aaPredicted RBP4.97□□□□□ -1.61
HERC4-204ENST00000395198 NLRP12P59046 1061 aa4.97□□□□□ -1.61
HERC4-204ENST00000395198 ZSCAN26Q16670 478 aa4.97□□□□□ -1.61
HERC4-204ENST00000395198 TMEM259Q4ZIN3 620 aa4.97□□□□□ -1.61
HERC4-204ENST00000395198 PACS1Q6VY07 963 aa4.97□□□□□ -1.61
HERC4-204ENST00000395198 BHMTQ93088 406 aa4.97□□□□□ -1.61
HERC4-204ENST00000395198 SLC39A3Q9BRY0 314 aa4.97□□□□□ -1.61
HERC4-204ENST00000395198 C2orf49Q9BVC5 232 aaPredicted RBP4.97□□□□□ -1.61
HERC4-204ENST00000395198 HMX1Q9NP08 348 aaPredicted RBP4.97□□□□□ -1.61
HERC4-204ENST00000395198 PIH1D1Q9NWS0 290 aaKnown RBP4.97□□□□□ -1.61
HERC4-204ENST00000395198 STAP2Q9UGK3 403 aa4.97□□□□□ -1.61
HERC4-204ENST00000395198 TULP2O00295 520 aa4.96□□□□□ -1.61
HERC4-204ENST00000395198 CSPG5O95196 566 aa4.96□□□□□ -1.61
HERC4-204ENST00000395198 ATF7P17544 494 aaPredicted RBP4.96□□□□□ -1.61
HERC4-204ENST00000395198 SCNN1DP51172 638 aa4.96□□□□□ -1.61
HERC4-204ENST00000395198 MTMR3Q13615 1198 aa4.96□□□□□ -1.61
HERC4-204ENST00000395198 ARMC4Q5T2S8 1044 aa4.96□□□□□ -1.61
HERC4-204ENST00000395198 CEP68Q76N32 757 aa4.96□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms