RNA–Protein interactions for RNA: ENST00000394997.5

HIF1A-203, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HIF1A, Length 3,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-203ENST00000394997 Q6ZUG5 572 aa12.19□□□□□ -0.46
HIF1A-203ENST00000394997 PIH1D3Q9NQM4 214 aaKnown RBP12.19□□□□□ -0.46
HIF1A-203ENST00000394997 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.19□□□□□ -0.46
HIF1A-203ENST00000394997 COL11A2P13942 1736 aaPredicted RBP12.19□□□□□ -0.46
HIF1A-203ENST00000394997 GOLIM4O00461 696 aa12.18□□□□□ -0.46
HIF1A-203ENST00000394997 RNF113AO15541 343 aaKnown RBP12.18□□□□□ -0.46
HIF1A-203ENST00000394997 CBX1P83916 185 aa12.18□□□□□ -0.46
HIF1A-203ENST00000394997 BARGINQ6ZT62 677 aa12.18□□□□□ -0.46
HIF1A-203ENST00000394997 NEK1Q96PY6 1258 aa12.18□□□□□ -0.46
HIF1A-203ENST00000394997 STRN4Q9NRL3 753 aa12.18□□□□□ -0.46
HIF1A-203ENST00000394997 NOL7Q9UMY1 257 aaKnown RBP12.18□□□□□ -0.46
HIF1A-203ENST00000394997 ADAMTSL1Q8N6G6 1762 aa12.18□□□□□ -0.46
HIF1A-203ENST00000394997 C3orf67Q6ZVT6 689 aa12.18□□□□□ -0.46
HIF1A-203ENST00000394997 ZNF771Q7L3S4 317 aaPredicted RBP12.18□□□□□ -0.46
HIF1A-203ENST00000394997 BCL2L12Q9HB09 334 aa12.18□□□□□ -0.46
HIF1A-203ENST00000394997 ZNF804BA4D1E1 1349 aa12.18□□□□□ -0.46
HIF1A-203ENST00000394997 ZNF500O60304 480 aaPredicted RBP12.18□□□□□ -0.46
HIF1A-203ENST00000394997 PTF1AQ7RTS3 328 aa12.18□□□□□ -0.46
HIF1A-203ENST00000394997 FAM217BQ9NTX9 383 aaPredicted RBP12.18□□□□□ -0.46
HIF1A-203ENST00000394997 U3KPZ7 1027 aaPredicted RBP12.18□□□□□ -0.46
HIF1A-203ENST00000394997 WDR19Q8NEZ3 1342 aa12.18□□□□□ -0.46
HIF1A-203ENST00000394997 MYH1P12882 1939 aa12.18□□□□□ -0.46
HIF1A-203ENST00000394997 LIG1P18858 919 aa12.18□□□□□ -0.46
HIF1A-203ENST00000394997 ZAP70P43403 619 aa12.18□□□□□ -0.46
HIF1A-203ENST00000394997 DRC7Q8IY82 874 aa12.18□□□□□ -0.46
HIF1A-203ENST00000394997 ENGASEQ8NFI3 743 aa12.18□□□□□ -0.46
HIF1A-203ENST00000394997 THRAP3Q9Y2W1 955 aaKnown RBP12.18□□□□□ -0.46
HIF1A-203ENST00000394997 WTIPA6NIX2 430 aaPredicted RBP12.17□□□□□ -0.46
HIF1A-203ENST00000394997 PDIA3P30101 505 aaKnown RBP12.17□□□□□ -0.46
HIF1A-203ENST00000394997 ADD2P35612 726 aa12.17□□□□□ -0.46
HIF1A-203ENST00000394997 SUSD4Q5VX71 490 aa12.17□□□□□ -0.46
HIF1A-203ENST00000394997 EPB41L4AQ9HCS5 686 aaPredicted RBP12.17□□□□□ -0.46
HIF1A-203ENST00000394997 CSPP1Q1MSJ5 1256 aa12.17□□□□□ -0.46
HIF1A-203ENST00000394997 TEX13AQ9BXU3 409 aaPredicted RBP12.17□□□□□ -0.46
HIF1A-203ENST00000394997 RGS22Q8NE09 1264 aa12.16□□□□□ -0.46
HIF1A-203ENST00000394997 SENP2Q9HC62 589 aa12.16□□□□□ -0.46
HIF1A-203ENST00000394997 ITGA6P23229 1130 aa12.16□□□□□ -0.46
HIF1A-203ENST00000394997 BLOC1S2Q6QNY1 142 aa12.16□□□□□ -0.46
HIF1A-203ENST00000394997 TBC1D10CQ8IV04 446 aa12.16□□□□□ -0.46
HIF1A-203ENST00000394997 NTRK3Q16288 839 aa12.16□□□□□ -0.46
HIF1A-203ENST00000394997 DHX32Q7L7V1 743 aaKnown RBP12.16□□□□□ -0.46
HIF1A-203ENST00000394997 AK7Q96M32 723 aa12.16□□□□□ -0.46
HIF1A-203ENST00000394997 LLPHQ9BRT6 129 aaKnown RBP12.16□□□□□ -0.46
HIF1A-203ENST00000394997 GOLPH3LQ9H4A5 285 aa12.16□□□□□ -0.46
HIF1A-203ENST00000394997 FGAP02671 866 aa12.15□□□□□ -0.46
HIF1A-203ENST00000394997 DNAJC2Q99543 621 aaKnown RBP12.15□□□□□ -0.46
HIF1A-203ENST00000394997 PDE8BO95263 885 aa12.15□□□□□ -0.46
HIF1A-203ENST00000394997 LEO1Q8WVC0 666 aaPredicted RBP12.15□□□□□ -0.46
HIF1A-203ENST00000394997 PSMA5P28066 241 aa12.15□□□□□ -0.47
HIF1A-203ENST00000394997 ADGRA1Q86SQ6 560 aa12.15□□□□□ -0.47
HIF1A-203ENST00000394997 ZNF274Q96GC6 653 aaPredicted RBP12.15□□□□□ -0.47
HIF1A-203ENST00000394997 MRVI1Q9Y6F6 885 aa12.15□□□□□ -0.47
HIF1A-203ENST00000394997 CCDC183Q5T5S1 534 aa12.14□□□□□ -0.47
HIF1A-203ENST00000394997 CYB5R4Q7L1T6 521 aa12.14□□□□□ -0.47
HIF1A-203ENST00000394997 KCNF1Q9H3M0 494 aa12.14□□□□□ -0.47
HIF1A-203ENST00000394997 IGSF3O75054 1194 aa12.14□□□□□ -0.47
HIF1A-203ENST00000394997 LRRC2Q9BYS8 371 aa12.14□□□□□ -0.47
HIF1A-203ENST00000394997 FTOQ9C0B1 505 aaKnown RBP eCLIP12.14□□□□□ -0.47
HIF1A-203ENST00000394997 SLC51AQ86UW1 340 aa12.14□□□□□ -0.47
HIF1A-203ENST00000394997 SMC3Q9UQE7 1217 aa12.14□□□□□ -0.47
HIF1A-203ENST00000394997 PHKA1P46020 1223 aa12.13□□□□□ -0.47
HIF1A-203ENST00000394997 KRT32Q14532 448 aa12.13□□□□□ -0.47
HIF1A-203ENST00000394997 ANKRD1Q15327 319 aa12.13□□□□□ -0.47
HIF1A-203ENST00000394997 LINC00116Q8NCU8 138 aa12.13□□□□□ -0.47
HIF1A-203ENST00000394997 FAM177BA6PVY3 158 aa12.13□□□□□ -0.47
HIF1A-203ENST00000394997 SNAP23O00161 211 aa12.13□□□□□ -0.47
HIF1A-203ENST00000394997 APOBRQ0VD83 1088 aa12.13□□□□□ -0.47
HIF1A-203ENST00000394997 WWC3Q9ULE0 1092 aa12.13□□□□□ -0.47
HIF1A-203ENST00000394997 KIF28PB7ZC32 967 aa12.12□□□□□ -0.47
HIF1A-203ENST00000394997 IFIT1P09914 478 aaKnown RBP12.12□□□□□ -0.47
HIF1A-203ENST00000394997 CRKLP46109 303 aaKnown RBP12.12□□□□□ -0.47
HIF1A-203ENST00000394997 IGDCC4Q8TDY8 1250 aa12.12□□□□□ -0.47
HIF1A-203ENST00000394997 APPBP2Q92624 585 aa12.12□□□□□ -0.47
HIF1A-203ENST00000394997 RCOR1Q9UKL0 485 aa12.12□□□□□ -0.47
HIF1A-203ENST00000394997 TNS1Q9HBL0 1735 aaKnown RBP12.12□□□□□ -0.47
HIF1A-203ENST00000394997 SMIM22K7EJ46 135 aa12.12□□□□□ -0.47
HIF1A-203ENST00000394997 ZKSCAN1P17029 563 aaPredicted RBP12.12□□□□□ -0.47
HIF1A-203ENST00000394997 NAA16Q6N069 864 aaPredicted RBP12.12□□□□□ -0.47
HIF1A-203ENST00000394997 SYAP1Q96A49 352 aaPredicted RBP12.12□□□□□ -0.47
HIF1A-203ENST00000394997 RGPD3A6NKT7 1758 aaPredicted RBP12.12□□□□□ -0.47
HIF1A-203ENST00000394997 RGPD4Q7Z3J3 1758 aa12.12□□□□□ -0.47
HIF1A-203ENST00000394997 PDE8AO60658 829 aa12.12□□□□□ -0.47
HIF1A-203ENST00000394997 ALX1Q15699 326 aa12.12□□□□□ -0.47
HIF1A-203ENST00000394997 CCDC102BQ68D86 513 aa12.12□□□□□ -0.47
HIF1A-203ENST00000394997 BRF1Q92994 677 aa12.12□□□□□ -0.47
HIF1A-203ENST00000394997 CCDC39Q9UFE4 941 aa12.12□□□□□ -0.47
HIF1A-203ENST00000394997 RGL2O15211 777 aa12.11□□□□□ -0.47
HIF1A-203ENST00000394997 CHMP3Q9Y3E7 222 aa12.11□□□□□ -0.47
HIF1A-203ENST00000394997 IRS4O14654 1257 aaPredicted RBP12.11□□□□□ -0.47
HIF1A-203ENST00000394997 KCNQ2O43526 872 aa12.11□□□□□ -0.47
HIF1A-203ENST00000394997 NR1I2O75469 434 aa12.11□□□□□ -0.47
HIF1A-203ENST00000394997 UBE3CQ15386 1083 aa12.11□□□□□ -0.47
HIF1A-203ENST00000394997 MTERF4Q7Z6M4 381 aaKnown RBP12.11□□□□□ -0.47
HIF1A-203ENST00000394997 NCOA5Q9HCD5 579 aaKnown RBP12.11□□□□□ -0.47
HIF1A-203ENST00000394997 SEC31BQ9NQW1 1179 aa12.11□□□□□ -0.47
HIF1A-203ENST00000394997 TM4SF1P30408 202 aa12.11□□□□□ -0.47
HIF1A-203ENST00000394997 RASGRF1Q13972 1273 aa12.11□□□□□ -0.47
HIF1A-203ENST00000394997 STRBPQ96SI9 672 aaKnown RBP12.11□□□□□ -0.47
HIF1A-203ENST00000394997 HSD3B7Q9H2F3 369 aa12.11□□□□□ -0.47
HIF1A-203ENST00000394997 SPDYE4A6NLX3 237 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms