RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 NKIRAS1Q9NYS0 192 aa8.37□□□□□ -1.07
SYNE2-205ENST00000394768 ACTN4O43707 911 aaKnown RBP8.37□□□□□ -1.07
SYNE2-205ENST00000394768 VCX3AQ9NNX9 186 aa8.37□□□□□ -1.07
SYNE2-205ENST00000394768 GABPAQ06546 454 aa8.37□□□□□ -1.07
SYNE2-205ENST00000394768 PRIMPOLQ96LW4 560 aa8.37□□□□□ -1.07
SYNE2-205ENST00000394768 ZC3H12CQ9C0D7 883 aaKnown RBP8.37□□□□□ -1.07
SYNE2-205ENST00000394768 TMPOP42166 694 aaKnown RBP8.36□□□□□ -1.07
SYNE2-205ENST00000394768 AFAP1Q8N556 730 aa8.36□□□□□ -1.07
SYNE2-205ENST00000394768 NEK1Q96PY6 1258 aa8.36□□□□□ -1.07
SYNE2-205ENST00000394768 MGEA5O60502 916 aa8.36□□□□□ -1.07
SYNE2-205ENST00000394768 EPB41P11171 864 aaKnown RBP8.36□□□□□ -1.07
SYNE2-205ENST00000394768 TPTE2Q6XPS3 522 aa8.36□□□□□ -1.07
SYNE2-205ENST00000394768 SLC26A6Q9BXS9 759 aa8.36□□□□□ -1.07
SYNE2-205ENST00000394768 USP16Q9Y5T5 823 aa8.36□□□□□ -1.07
SYNE2-205ENST00000394768 CETN3O15182 167 aa8.36□□□□□ -1.07
SYNE2-205ENST00000394768 ADAMTS2O95450 1211 aa8.36□□□□□ -1.07
SYNE2-205ENST00000394768 ITIH3Q06033 890 aa8.36□□□□□ -1.07
SYNE2-205ENST00000394768 ELMSAN1Q6PJG2 1045 aa8.36□□□□□ -1.07
SYNE2-205ENST00000394768 GBP6Q6ZN66 633 aa8.36□□□□□ -1.07
SYNE2-205ENST00000394768 CCDC121Q6ZUS5 278 aa8.36□□□□□ -1.07
SYNE2-205ENST00000394768 TTC16Q8NEE8 873 aa8.36□□□□□ -1.07
SYNE2-205ENST00000394768 CARD10Q9BWT7 1032 aa8.36□□□□□ -1.07
SYNE2-205ENST00000394768 RRS1Q15050 365 aaKnown RBP8.36□□□□□ -1.07
SYNE2-205ENST00000394768 MAP3K21Q5TCX8 1036 aa8.36□□□□□ -1.07
SYNE2-205ENST00000394768 STRN3Q13033 797 aa8.36□□□□□ -1.07
SYNE2-205ENST00000394768 RNF34Q969K3 372 aa8.36□□□□□ -1.07
SYNE2-205ENST00000394768 MIS12Q9H081 205 aa8.36□□□□□ -1.07
SYNE2-205ENST00000394768 EXOC6BQ9Y2D4 811 aa8.36□□□□□ -1.07
SYNE2-205ENST00000394768 IRX4P78413 519 aa8.36□□□□□ -1.07
SYNE2-205ENST00000394768 RRAGBQ5VZM2 374 aa8.36□□□□□ -1.07
SYNE2-205ENST00000394768 NAA16Q6N069 864 aaPredicted RBP8.36□□□□□ -1.07
SYNE2-205ENST00000394768 CCDC65Q8IXS2 484 aa8.36□□□□□ -1.07
SYNE2-205ENST00000394768 BACH1O14867 736 aa8.36□□□□□ -1.07
SYNE2-205ENST00000394768 SETSIPP0DME0 302 aa8.36□□□□□ -1.07
SYNE2-205ENST00000394768 HEATR3Q7Z4Q2 680 aa8.36□□□□□ -1.07
SYNE2-205ENST00000394768 MNAT1P51948 309 aa8.36□□□□□ -1.07
SYNE2-205ENST00000394768 ASIC1P78348 528 aa8.36□□□□□ -1.07
SYNE2-205ENST00000394768 LACTBP83111 547 aaPredicted RBP8.36□□□□□ -1.07
SYNE2-205ENST00000394768 ATL3Q6DD88 541 aa8.36□□□□□ -1.07
SYNE2-205ENST00000394768 NUTM1Q86Y26 1132 aa8.36□□□□□ -1.07
SYNE2-205ENST00000394768 FEZ2Q9UHY8 353 aaPredicted RBP8.36□□□□□ -1.07
SYNE2-205ENST00000394768 RAD54L2Q9Y4B4 1467 aa8.36□□□□□ -1.07
SYNE2-205ENST00000394768 DAPK3O43293 454 aa8.36□□□□□ -1.07
SYNE2-205ENST00000394768 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.36□□□□□ -1.07
SYNE2-205ENST00000394768 IQCDQ96DY2 449 aa8.36□□□□□ -1.07
SYNE2-205ENST00000394768 VAT1LQ9HCJ6 419 aa8.36□□□□□ -1.07
SYNE2-205ENST00000394768 MCM4P33991 863 aa8.35□□□□□ -1.07
SYNE2-205ENST00000394768 DNM2P50570 870 aa8.35□□□□□ -1.07
SYNE2-205ENST00000394768 CCDC42Q96M95 316 aa8.35□□□□□ -1.07
SYNE2-205ENST00000394768 NOP56O00567 594 aaKnown RBP8.35□□□□□ -1.07
SYNE2-205ENST00000394768 WDR46O15213 610 aaKnown RBP8.35□□□□□ -1.07
SYNE2-205ENST00000394768 PSPC1Q8WXF1 523 aaKnown RBP8.35□□□□□ -1.07
SYNE2-205ENST00000394768 SLC12A5Q9H2X9 1139 aa8.35□□□□□ -1.07
SYNE2-205ENST00000394768 LUC7L2Q9Y383 392 aaKnown RBP8.35□□□□□ -1.07
SYNE2-205ENST00000394768 NPHP3Q7Z494 1330 aa8.35□□□□□ -1.07
SYNE2-205ENST00000394768 DNMBPQ6XZF7 1577 aa8.35□□□□□ -1.07
SYNE2-205ENST00000394768 WDR7Q9Y4E6 1490 aa8.35□□□□□ -1.07
SYNE2-205ENST00000394768 UBASH3AP57075 661 aa8.35□□□□□ -1.07
SYNE2-205ENST00000394768 TRIM14Q14142 442 aa8.35□□□□□ -1.07
SYNE2-205ENST00000394768 SERPINA10Q9UK55 444 aa8.35□□□□□ -1.07
SYNE2-205ENST00000394768 ADGRL1O94910 1474 aa8.35□□□□□ -1.07
SYNE2-205ENST00000394768 PHF8Q9UPP1 1060 aa8.35□□□□□ -1.07
SYNE2-205ENST00000394768 TIAM1Q13009 1591 aa8.35□□□□□ -1.07
SYNE2-205ENST00000394768 ZNF165P49910 485 aa8.35□□□□□ -1.07
SYNE2-205ENST00000394768 ATP11AP98196 1134 aa8.35□□□□□ -1.07
SYNE2-205ENST00000394768 KIF22Q14807 665 aa8.35□□□□□ -1.07
SYNE2-205ENST00000394768 PHLDB2Q86SQ0 1253 aa8.35□□□□□ -1.07
SYNE2-205ENST00000394768 CFTRP13569 1480 aa8.35□□□□□ -1.07
SYNE2-205ENST00000394768 GNG11P61952 73 aa8.35□□□□□ -1.07
SYNE2-205ENST00000394768 TCIRG1Q13488 830 aa8.35□□□□□ -1.07
SYNE2-205ENST00000394768 KRT2P35908 639 aa8.35□□□□□ -1.07
SYNE2-205ENST00000394768 TTC6Q86TZ1 520 aa8.35□□□□□ -1.07
SYNE2-205ENST00000394768 GOLGA8QA0A0J9YX86 632 aa8.34□□□□□ -1.07
SYNE2-205ENST00000394768 GOLGA8OA6NCC3 632 aa8.34□□□□□ -1.07
SYNE2-205ENST00000394768 GOLGA8NF8WBI6 632 aa8.34□□□□□ -1.07
SYNE2-205ENST00000394768 GIGYF1O75420 1035 aaPredicted RBP8.34□□□□□ -1.07
SYNE2-205ENST00000394768 CEP120Q8N960 986 aa8.34□□□□□ -1.07
SYNE2-205ENST00000394768 RSRC1Q96IZ7 334 aaKnown RBP8.34□□□□□ -1.07
SYNE2-205ENST00000394768 CDCA7Q9BWT1 371 aaPredicted RBP8.34□□□□□ -1.07
SYNE2-205ENST00000394768 RABGAP1Q9Y3P9 1069 aa8.34□□□□□ -1.07
SYNE2-205ENST00000394768 TUBB2AQ13885 445 aa8.34□□□□□ -1.07
SYNE2-205ENST00000394768 TUBB2BQ9BVA1 445 aa8.34□□□□□ -1.07
SYNE2-205ENST00000394768 TYW5A2RUC4 315 aaKnown RBP8.34□□□□□ -1.07
SYNE2-205ENST00000394768 SUPT20HQ8NEM7 779 aa8.34□□□□□ -1.07
SYNE2-205ENST00000394768 F8W8V4 182 aa8.34□□□□□ -1.07
SYNE2-205ENST00000394768 CDC37L1Q7L3B6 337 aa8.34□□□□□ -1.07
SYNE2-205ENST00000394768 CNGA4Q8IV77 575 aa8.34□□□□□ -1.07
SYNE2-205ENST00000394768 MMRN2Q9H8L6 949 aa8.34□□□□□ -1.07
SYNE2-205ENST00000394768 CALUO43852 315 aaPredicted RBP8.34□□□□□ -1.07
SYNE2-205ENST00000394768 GRM1Q13255 1194 aa8.34□□□□□ -1.07
SYNE2-205ENST00000394768 HAUS1Q96CS2 278 aa8.34□□□□□ -1.07
SYNE2-205ENST00000394768 RIOK1Q9BRS2 568 aaKnown RBP8.34□□□□□ -1.07
SYNE2-205ENST00000394768 RTCBQ9Y3I0 505 aaKnown RBP8.34□□□□□ -1.07
SYNE2-205ENST00000394768 CC2D2AQ9P2K1 1620 aa8.34□□□□□ -1.07
SYNE2-205ENST00000394768 I3L4J1 428 aa8.34□□□□□ -1.07
SYNE2-205ENST00000394768 TRIM75PA6NK02 468 aa8.34□□□□□ -1.07
SYNE2-205ENST00000394768 SOS1Q07889 1333 aaPredicted RBP8.34□□□□□ -1.07
SYNE2-205ENST00000394768 FLIIQ13045 1269 aa8.34□□□□□ -1.07
SYNE2-205ENST00000394768 NCOA1Q15788 1441 aa8.34□□□□□ -1.07
SYNE2-205ENST00000394768 VEZTQ9HBM0 779 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms