RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 COL23A1Q86Y22 540 aaPredicted RBP22.73■■□□□ 1.23
CLDND1-203ENST00000394181 INTS4Q96HW7 963 aaKnown RBP22.73■■□□□ 1.23
CLDND1-203ENST00000394181 ZNF804BA4D1E1 1349 aa22.73■■□□□ 1.23
CLDND1-203ENST00000394181 UBE3CQ15386 1083 aa22.73■■□□□ 1.23
CLDND1-203ENST00000394181 ZSCAN25Q6NSZ9 544 aa22.73■■□□□ 1.23
CLDND1-203ENST00000394181 MAGEB6Q8N7X4 407 aa22.73■■□□□ 1.23
CLDND1-203ENST00000394181 A0A1B0GUL6 1792 aa22.73■■□□□ 1.23
CLDND1-203ENST00000394181 POLRMTO00411 1230 aaKnown RBP22.72■■□□□ 1.23
CLDND1-203ENST00000394181 FGAP02671 866 aa22.72■■□□□ 1.23
CLDND1-203ENST00000394181 TOB2Q14106 344 aaPredicted RBP22.72■■□□□ 1.23
CLDND1-203ENST00000394181 ME3Q16798 604 aa22.72■■□□□ 1.23
CLDND1-203ENST00000394181 ST3GAL1Q11201 340 aa22.72■■□□□ 1.23
CLDND1-203ENST00000394181 IL27Q8NEV9 243 aa22.72■■□□□ 1.23
CLDND1-203ENST00000394181 COL1A1P02452 1464 aaPredicted RBP22.71■■□□□ 1.23
CLDND1-203ENST00000394181 HAND2P61296 217 aa22.71■■□□□ 1.23
CLDND1-203ENST00000394181 KRT32Q14532 448 aa22.71■■□□□ 1.23
CLDND1-203ENST00000394181 TXNRD3Q86VQ6 643 aa22.71■■□□□ 1.23
CLDND1-203ENST00000394181 NECAB1Q8N987 351 aa22.71■■□□□ 1.23
CLDND1-203ENST00000394181 GRAPQ13588 217 aa22.7■■□□□ 1.23
CLDND1-203ENST00000394181 FOXD4L5Q5VV16 416 aaPredicted RBP22.7■■□□□ 1.23
CLDND1-203ENST00000394181 GRAPLQ8TC17 118 aaPredicted RBP22.7■■□□□ 1.23
CLDND1-203ENST00000394181 FOXD4L4Q8WXT5 416 aaPredicted RBP22.7■■□□□ 1.23
CLDND1-203ENST00000394181 LRRC2Q9BYS8 371 aa22.7■■□□□ 1.23
CLDND1-203ENST00000394181 MYH7P12883 1935 aa22.7■■□□□ 1.22
CLDND1-203ENST00000394181 CCDC83Q8IWF9 413 aa22.7■■□□□ 1.22
CLDND1-203ENST00000394181 E7EWF7 191 aa22.69■■□□□ 1.22
CLDND1-203ENST00000394181 NUCB2P80303 420 aa22.69■■□□□ 1.22
CLDND1-203ENST00000394181 MAP3K12Q12852 859 aa22.69■■□□□ 1.22
CLDND1-203ENST00000394181 CAVIN4Q5BKX8 364 aa22.69■■□□□ 1.22
CLDND1-203ENST00000394181 FBXO33Q7Z6M2 555 aa22.69■■□□□ 1.22
CLDND1-203ENST00000394181 VPS37DQ86XT2 251 aa22.69■■□□□ 1.22
CLDND1-203ENST00000394181 ST5P78524 1137 aa22.69■■□□□ 1.22
CLDND1-203ENST00000394181 CHAMP1Q96JM3 812 aa22.69■■□□□ 1.22
CLDND1-203ENST00000394181 ANKRD2Q9GZV1 360 aa22.69■■□□□ 1.22
CLDND1-203ENST00000394181 CRY2Q49AN0 593 aa22.68■■□□□ 1.22
CLDND1-203ENST00000394181 LRP2BPQ9P2M1 347 aa22.68■■□□□ 1.22
CLDND1-203ENST00000394181 RPGRQ92834 1020 aaKnown RBP22.67■■□□□ 1.22
CLDND1-203ENST00000394181 STRBPQ96SI9 672 aaKnown RBP22.67■■□□□ 1.22
CLDND1-203ENST00000394181 ALDH8A1Q9H2A2 487 aaPredicted RBP22.67■■□□□ 1.22
CLDND1-203ENST00000394181 ABCF2Q9UG63 623 aa22.67■■□□□ 1.22
CLDND1-203ENST00000394181 Q6ZUG5 572 aa22.67■■□□□ 1.22
CLDND1-203ENST00000394181 CHST3Q7LGC8 479 aa22.67■■□□□ 1.22
CLDND1-203ENST00000394181 GNL3LQ9NVN8 582 aaKnown RBP22.67■■□□□ 1.22
CLDND1-203ENST00000394181 ADGRA1Q86SQ6 560 aa22.66■■□□□ 1.22
CLDND1-203ENST00000394181 GPR101Q96P66 508 aaPredicted RBP22.66■■□□□ 1.22
CLDND1-203ENST00000394181 ARMT1Q9H993 441 aa22.66■■□□□ 1.22
CLDND1-203ENST00000394181 ANKIB1Q9P2G1 1089 aa22.66■■□□□ 1.22
CLDND1-203ENST00000394181 MBD4O95243 580 aa22.66■■□□□ 1.22
CLDND1-203ENST00000394181 AIDAQ96BJ3 306 aa22.66■■□□□ 1.22
CLDND1-203ENST00000394181 ZSCAN31Q96LW9 406 aaPredicted RBP22.66■■□□□ 1.22
CLDND1-203ENST00000394181 IRS2Q9Y4H2 1338 aa22.65■■□□□ 1.22
CLDND1-203ENST00000394181 APPP05067 770 aa22.65■■□□□ 1.22
CLDND1-203ENST00000394181 MIGA1Q8NAN2 632 aa22.65■■□□□ 1.22
CLDND1-203ENST00000394181 CTNNA3Q9UI47 895 aa22.65■■□□□ 1.22
CLDND1-203ENST00000394181 BAG4O95429 457 aaKnown RBP22.65■■□□□ 1.22
CLDND1-203ENST00000394181 HIBADHP31937 336 aaKnown RBP22.65■■□□□ 1.22
CLDND1-203ENST00000394181 EXOSC10Q01780 885 aaKnown RBP22.65■■□□□ 1.22
CLDND1-203ENST00000394181 STK3Q13188 491 aa22.65■■□□□ 1.22
CLDND1-203ENST00000394181 NBPF3Q9H094 633 aa22.65■■□□□ 1.22
CLDND1-203ENST00000394181 SH2B1Q9NRF2 756 aaPredicted RBP22.65■■□□□ 1.22
CLDND1-203ENST00000394181 JAG2Q9Y219 1238 aa22.65■■□□□ 1.22
CLDND1-203ENST00000394181 PRKAB2O43741 272 aa22.64■■□□□ 1.21
CLDND1-203ENST00000394181 IMMTQ16891 758 aaKnown RBP22.64■■□□□ 1.21
CLDND1-203ENST00000394181 DHX32Q7L7V1 743 aaKnown RBP22.64■■□□□ 1.21
CLDND1-203ENST00000394181 DOCK2Q92608 1830 aa22.64■■□□□ 1.21
CLDND1-203ENST00000394181 MSL1Q68DK7 614 aa22.63■■□□□ 1.21
CLDND1-203ENST00000394181 LCORLQ8N3X6 602 aa22.63■■□□□ 1.21
CLDND1-203ENST00000394181 NKX2-3Q8TAU0 364 aa22.63■■□□□ 1.21
CLDND1-203ENST00000394181 GBP4Q96PP9 640 aa22.63■■□□□ 1.21
CLDND1-203ENST00000394181 DENND2AQ9ULE3 1009 aa22.63■■□□□ 1.21
CLDND1-203ENST00000394181 PNPLA7Q6ZV29 1317 aa22.63■■□□□ 1.21
CLDND1-203ENST00000394181 BRD1O95696 1058 aa22.63■■□□□ 1.21
CLDND1-203ENST00000394181 GPSM2P81274 684 aa22.63■■□□□ 1.21
CLDND1-203ENST00000394181 ANKRD1Q15327 319 aa22.63■■□□□ 1.21
CLDND1-203ENST00000394181 CLEC17AQ6ZS10 378 aa22.63■■□□□ 1.21
CLDND1-203ENST00000394181 ZNF384Q8TF68 577 aa22.63■■□□□ 1.21
CLDND1-203ENST00000394181 RAI14Q9P0K7 980 aa22.63■■□□□ 1.21
CLDND1-203ENST00000394181 NLGN1Q8N2Q7 840 aa22.62■■□□□ 1.21
CLDND1-203ENST00000394181 BRF1Q92994 677 aa22.62■■□□□ 1.21
CLDND1-203ENST00000394181 ZNF213O14771 459 aa22.62■■□□□ 1.21
CLDND1-203ENST00000394181 CYP7A1P22680 504 aa22.62■■□□□ 1.21
CLDND1-203ENST00000394181 EN1Q05925 392 aaPredicted RBP22.62■■□□□ 1.21
CLDND1-203ENST00000394181 EZH2Q15910 746 aaKnown RBP22.62■■□□□ 1.21
CLDND1-203ENST00000394181 RBM17Q96I25 401 aaKnown RBP22.62■■□□□ 1.21
CLDND1-203ENST00000394181 EPB41L4AQ9HCS5 686 aaPredicted RBP22.62■■□□□ 1.21
CLDND1-203ENST00000394181 GPHNQ9NQX3 736 aaPredicted RBP22.62■■□□□ 1.21
CLDND1-203ENST00000394181 SMC3Q9UQE7 1217 aa22.62■■□□□ 1.21
CLDND1-203ENST00000394181 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.62■■□□□ 1.21
CLDND1-203ENST00000394181 GOLGB1Q14789 3259 aaKnown RBP22.61■■□□□ 1.21
CLDND1-203ENST00000394181 LAMA4Q16363 1823 aa22.61■■□□□ 1.21
CLDND1-203ENST00000394181 TNS1Q9HBL0 1735 aaKnown RBP22.6■■□□□ 1.21
CLDND1-203ENST00000394181 KLRG2A4D1S0 409 aaPredicted RBP22.6■■□□□ 1.21
CLDND1-203ENST00000394181 HMGB1P09429 215 aaKnown RBP22.6■■□□□ 1.21
CLDND1-203ENST00000394181 CHAF1AQ13111 956 aaPredicted RBP22.6■■□□□ 1.21
CLDND1-203ENST00000394181 ANO8Q9HCE9 1232 aaPredicted RBP22.6■■□□□ 1.21
CLDND1-203ENST00000394181 MMP10P09238 476 aa22.6■■□□□ 1.21
CLDND1-203ENST00000394181 GJB2P29033 226 aa22.6■■□□□ 1.21
CLDND1-203ENST00000394181 TBC1D10CQ8IV04 446 aa22.6■■□□□ 1.21
CLDND1-203ENST00000394181 INCENPQ9NQS7 918 aa22.6■■□□□ 1.21
CLDND1-203ENST00000394181 NSFL1CQ9UNZ2 370 aaKnown RBP22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms