RNA–Protein interactions for RNA: ENST00000394053.6

MTHFD2-201, Transcript of methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD2, Length 4,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD2-201ENST00000394053 CCDC70Q6NSX1 233 aa12.29□□□□□ -0.44
MTHFD2-201ENST00000394053 LAMC1P11047 1609 aa12.29□□□□□ -0.44
MTHFD2-201ENST00000394053 CBFA2T2O43439 604 aa12.29□□□□□ -0.44
MTHFD2-201ENST00000394053 ZNF165P49910 485 aa12.29□□□□□ -0.44
MTHFD2-201ENST00000394053 TMEM132AQ24JP5 1023 aa12.29□□□□□ -0.44
MTHFD2-201ENST00000394053 ISM2Q6H9L7 571 aa12.29□□□□□ -0.44
MTHFD2-201ENST00000394053 HDAC9Q9UKV0 1011 aa12.29□□□□□ -0.44
MTHFD2-201ENST00000394053 PTCH1Q13635 1447 aa12.29□□□□□ -0.44
MTHFD2-201ENST00000394053 MARCKSP29966 332 aaPredicted RBP12.29□□□□□ -0.44
MTHFD2-201ENST00000394053 CCDC178Q5BJE1 867 aa12.29□□□□□ -0.44
MTHFD2-201ENST00000394053 ZNHIT6Q9NWK9 470 aaKnown RBP12.29□□□□□ -0.44
MTHFD2-201ENST00000394053 C1orf167Q5SNV9 1468 aa12.28□□□□□ -0.44
MTHFD2-201ENST00000394053 TEX11Q8IYF3 940 aa12.28□□□□□ -0.44
MTHFD2-201ENST00000394053 CUL5Q93034 780 aa12.28□□□□□ -0.44
MTHFD2-201ENST00000394053 TCP11L1Q9NUJ3 509 aa12.28□□□□□ -0.44
MTHFD2-201ENST00000394053 TLR7Q9NYK1 1049 aaKnown RBP12.28□□□□□ -0.44
MTHFD2-201ENST00000394053 STAP2Q9UGK3 403 aa12.28□□□□□ -0.44
MTHFD2-201ENST00000394053 PTH1RQ03431 593 aa12.28□□□□□ -0.44
MTHFD2-201ENST00000394053 TMEM266Q2M3C6 531 aa12.28□□□□□ -0.44
MTHFD2-201ENST00000394053 ZSCAN23Q3MJ62 389 aa12.28□□□□□ -0.44
MTHFD2-201ENST00000394053 CCDC102BQ68D86 513 aa12.28□□□□□ -0.44
MTHFD2-201ENST00000394053 NCOA5Q9HCD5 579 aaKnown RBP12.28□□□□□ -0.44
MTHFD2-201ENST00000394053 AATFQ9NY61 560 aaKnown RBP eCLIP12.28□□□□□ -0.44
MTHFD2-201ENST00000394053 DACT1Q9NYF0 836 aa12.28□□□□□ -0.44
MTHFD2-201ENST00000394053 PDE8BO95263 885 aa12.28□□□□□ -0.44
MTHFD2-201ENST00000394053 GYG1P46976 350 aa12.28□□□□□ -0.44
MTHFD2-201ENST00000394053 WDR66Q8TBY9 1149 aa12.28□□□□□ -0.44
MTHFD2-201ENST00000394053 TTLL12Q14166 644 aaPredicted RBP12.27□□□□□ -0.44
MTHFD2-201ENST00000394053 HEATR3Q7Z4Q2 680 aa12.27□□□□□ -0.44
MTHFD2-201ENST00000394053 JDP2Q8WYK2 163 aa12.27□□□□□ -0.44
MTHFD2-201ENST00000394053 VEZTQ9HBM0 779 aa12.27□□□□□ -0.44
MTHFD2-201ENST00000394053 PALD1Q9ULE6 856 aa12.27□□□□□ -0.44
MTHFD2-201ENST00000394053 TNS3Q68CZ2 1445 aa12.27□□□□□ -0.44
MTHFD2-201ENST00000394053 POLD1P28340 1107 aa12.27□□□□□ -0.45
MTHFD2-201ENST00000394053 BCAMP50895 628 aa12.27□□□□□ -0.45
MTHFD2-201ENST00000394053 KCNG4Q8TDN1 519 aa12.27□□□□□ -0.45
MTHFD2-201ENST00000394053 OSBPL3Q9H4L5 887 aa12.27□□□□□ -0.45
MTHFD2-201ENST00000394053 RBM26Q5T8P6 1007 aaKnown RBP12.27□□□□□ -0.45
MTHFD2-201ENST00000394053 FAM196AQ6ZSG2 479 aa12.27□□□□□ -0.45
MTHFD2-201ENST00000394053 NLRP10Q86W26 655 aa12.27□□□□□ -0.45
MTHFD2-201ENST00000394053 GOLGA6L1Q8N7Z2 621 aa12.27□□□□□ -0.45
MTHFD2-201ENST00000394053 HAUS7Q99871 368 aa12.27□□□□□ -0.45
MTHFD2-201ENST00000394053 ANGEL1Q9UNK9 670 aaKnown RBP12.27□□□□□ -0.45
MTHFD2-201ENST00000394053 TRIM37O94972 964 aa12.27□□□□□ -0.45
MTHFD2-201ENST00000394053 SYKP43405 635 aa12.27□□□□□ -0.45
MTHFD2-201ENST00000394053 DPP8Q6V1X1 898 aaPredicted RBP12.27□□□□□ -0.45
MTHFD2-201ENST00000394053 SAP30BPQ9UHR5 308 aaKnown RBP12.27□□□□□ -0.45
MTHFD2-201ENST00000394053 FBXO3Q9UK99 471 aa12.27□□□□□ -0.45
MTHFD2-201ENST00000394053 DLC1Q96QB1 1528 aa12.27□□□□□ -0.45
MTHFD2-201ENST00000394053 CALM1P0DP23 149 aa12.26□□□□□ -0.45
MTHFD2-201ENST00000394053 CALM2P0DP24 149 aa12.26□□□□□ -0.45
MTHFD2-201ENST00000394053 CALM3P0DP25 149 aa12.26□□□□□ -0.45
MTHFD2-201ENST00000394053 CT47A1Q5JQC4 288 aaPredicted RBP12.26□□□□□ -0.45
MTHFD2-201ENST00000394053 WDR78Q5VTH9 848 aa12.26□□□□□ -0.45
MTHFD2-201ENST00000394053 IGKV5-2P06315 115 aa12.26□□□□□ -0.45
MTHFD2-201ENST00000394053 TTC6Q86TZ1 520 aa12.26□□□□□ -0.45
MTHFD2-201ENST00000394053 FAM177A1Q8N128 213 aaPredicted RBP12.26□□□□□ -0.45
MTHFD2-201ENST00000394053 H0YIN7 160 aa12.26□□□□□ -0.45
MTHFD2-201ENST00000394053 IDEP14735 1019 aa12.26□□□□□ -0.45
MTHFD2-201ENST00000394053 ADORA1P30542 326 aa12.26□□□□□ -0.45
MTHFD2-201ENST00000394053 PTPN12Q05209 780 aaKnown RBP12.26□□□□□ -0.45
MTHFD2-201ENST00000394053 FAM173BQ6P4H8 233 aa12.26□□□□□ -0.45
MTHFD2-201ENST00000394053 VSIG10Q8N0Z9 540 aa12.26□□□□□ -0.45
MTHFD2-201ENST00000394053 LRRC7Q96NW7 1537 aa12.26□□□□□ -0.45
MTHFD2-201ENST00000394053 TRMT1LQ7Z2T5 733 aaKnown RBP12.25□□□□□ -0.45
MTHFD2-201ENST00000394053 TMEM87BQ96K49 555 aa12.25□□□□□ -0.45
MTHFD2-201ENST00000394053 PHKA1P46020 1223 aa12.25□□□□□ -0.45
MTHFD2-201ENST00000394053 CPS1P31327 1500 aa12.25□□□□□ -0.45
MTHFD2-201ENST00000394053 SPTLC2O15270 562 aa12.25□□□□□ -0.45
MTHFD2-201ENST00000394053 EIF5P55010 431 aaKnown RBP12.25□□□□□ -0.45
MTHFD2-201ENST00000394053 CHRNDQ07001 517 aa12.25□□□□□ -0.45
MTHFD2-201ENST00000394053 MSL1Q68DK7 614 aa12.25□□□□□ -0.45
MTHFD2-201ENST00000394053 SEC31BQ9NQW1 1179 aa12.25□□□□□ -0.45
MTHFD2-201ENST00000394053 ATG3Q9NT62 314 aa12.25□□□□□ -0.45
MTHFD2-201ENST00000394053 NRXN1Q9ULB1 1477 aa12.25□□□□□ -0.45
MTHFD2-201ENST00000394053 PTPRUQ92729 1446 aa12.25□□□□□ -0.45
MTHFD2-201ENST00000394053 EPB41L2O43491 1005 aaKnown RBP12.25□□□□□ -0.45
MTHFD2-201ENST00000394053 NAPAP54920 295 aa12.25□□□□□ -0.45
MTHFD2-201ENST00000394053 CCDC148Q8NFR7 591 aa12.25□□□□□ -0.45
MTHFD2-201ENST00000394053 MRPS27Q92552 414 aaKnown RBP12.25□□□□□ -0.45
MTHFD2-201ENST00000394053 THRAP3Q9Y2W1 955 aaKnown RBP12.25□□□□□ -0.45
MTHFD2-201ENST00000394053 CTDSPL2Q05D32 466 aa12.24□□□□□ -0.45
MTHFD2-201ENST00000394053 HSP90AA2PQ14568 343 aaPredicted RBP12.24□□□□□ -0.45
MTHFD2-201ENST00000394053 TNIP1Q15025 636 aa12.24□□□□□ -0.45
MTHFD2-201ENST00000394053 DSCC1Q9BVC3 393 aa12.24□□□□□ -0.45
MTHFD2-201ENST00000394053 TM6SF1Q9BZW5 370 aa12.24□□□□□ -0.45
MTHFD2-201ENST00000394053 DEF6Q9H4E7 631 aa12.24□□□□□ -0.45
MTHFD2-201ENST00000394053 RTL9Q8NET4 1388 aa12.24□□□□□ -0.45
MTHFD2-201ENST00000394053 ADGRB1O14514 1584 aa12.24□□□□□ -0.45
MTHFD2-201ENST00000394053 SASH1O94885 1247 aa12.24□□□□□ -0.45
MTHFD2-201ENST00000394053 PDE6AP16499 860 aa12.24□□□□□ -0.45
MTHFD2-201ENST00000394053 TRIM75PA6NK02 468 aa12.24□□□□□ -0.45
MTHFD2-201ENST00000394053 E7EWF7 191 aa12.24□□□□□ -0.45
MTHFD2-201ENST00000394053 ZSCAN30Q86W11 494 aa12.24□□□□□ -0.45
MTHFD2-201ENST00000394053 NCAPD2Q15021 1401 aa12.24□□□□□ -0.45
MTHFD2-201ENST00000394053 CCP110O43303 1012 aa12.23□□□□□ -0.45
MTHFD2-201ENST00000394053 HSPD1P10809 573 aaKnown RBP12.23□□□□□ -0.45
MTHFD2-201ENST00000394053 SFPQP23246 707 aaKnown RBP eCLIP12.23□□□□□ -0.45
MTHFD2-201ENST00000394053 STX1AQ16623 288 aa12.23□□□□□ -0.45
MTHFD2-201ENST00000394053 LRSAM1Q6UWE0 723 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms