RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 PIP4K2BP78356 416 aa16.86■□□□□ 0.29
MKS1-203ENST00000393120 RRAGDQ9NQL2 400 aaPredicted RBP16.86■□□□□ 0.29
MKS1-203ENST00000393120 ARAP2Q8WZ64 1704 aa16.86■□□□□ 0.29
MKS1-203ENST00000393120 LAMA4Q16363 1823 aa16.86■□□□□ 0.29
MKS1-203ENST00000393120 TCRBV5S4A2TA0A5A2 114 aa16.86■□□□□ 0.29
MKS1-203ENST00000393120 ZNF213O14771 459 aa16.86■□□□□ 0.29
MKS1-203ENST00000393120 CTDNEP1O95476 244 aa16.86■□□□□ 0.29
MKS1-203ENST00000393120 MCM5P33992 734 aa16.86■□□□□ 0.29
MKS1-203ENST00000393120 IGHMBP2P38935 993 aaKnown RBP16.86■□□□□ 0.29
MKS1-203ENST00000393120 MB21D2Q8IYB1 491 aaPredicted RBP16.86■□□□□ 0.29
MKS1-203ENST00000393120 FAM184AQ8NB25 1140 aa16.86■□□□□ 0.29
MKS1-203ENST00000393120 SPATA5Q8NB90 893 aa16.86■□□□□ 0.29
MKS1-203ENST00000393120 NCOA7Q8NI08 942 aa16.86■□□□□ 0.29
MKS1-203ENST00000393120 SEC31BQ9NQW1 1179 aa16.86■□□□□ 0.29
MKS1-203ENST00000393120 BCL9LQ86UU0 1499 aa16.86■□□□□ 0.29
MKS1-203ENST00000393120 SALL1Q9NSC2 1324 aa16.85■□□□□ 0.29
MKS1-203ENST00000393120 MYH14Q7Z406 1995 aaKnown RBP16.85■□□□□ 0.29
MKS1-203ENST00000393120 PDE6AP16499 860 aa16.85■□□□□ 0.29
MKS1-203ENST00000393120 RESTQ13127 1097 aa16.85■□□□□ 0.29
MKS1-203ENST00000393120 ALX1Q15699 326 aa16.85■□□□□ 0.29
MKS1-203ENST00000393120 HS1BP3Q53T59 392 aa16.85■□□□□ 0.29
MKS1-203ENST00000393120 TTC6Q86TZ1 520 aa16.85■□□□□ 0.29
MKS1-203ENST00000393120 FERMT3Q86UX7 667 aa16.85■□□□□ 0.29
MKS1-203ENST00000393120 HELBQ8NG08 1087 aaPredicted RBP16.85■□□□□ 0.29
MKS1-203ENST00000393120 CNTNAP4Q9C0A0 1308 aa16.85■□□□□ 0.29
MKS1-203ENST00000393120 COL5A3P25940 1745 aaPredicted RBP16.84■□□□□ 0.29
MKS1-203ENST00000393120 ZMYM6O95789 1325 aa16.84■□□□□ 0.29
MKS1-203ENST00000393120 ZNF532Q9HCE3 1301 aa16.84■□□□□ 0.29
MKS1-203ENST00000393120 IDH1O75874 414 aaKnown RBP16.84■□□□□ 0.29
MKS1-203ENST00000393120 FAM98CQ17RN3 349 aaKnown RBP16.84■□□□□ 0.29
MKS1-203ENST00000393120 FNBP4Q8N3X1 1017 aaPredicted RBP16.84■□□□□ 0.29
MKS1-203ENST00000393120 MYH7P12883 1935 aa16.83■□□□□ 0.29
MKS1-203ENST00000393120 DDX60Q8IY21 1712 aaKnown RBP16.83■□□□□ 0.28
MKS1-203ENST00000393120 PTPDC1A2A3K4 754 aa16.83■□□□□ 0.28
MKS1-203ENST00000393120 ESPNB1AK53 854 aa16.83■□□□□ 0.28
MKS1-203ENST00000393120 H3BQV1 296 aa16.83■□□□□ 0.28
MKS1-203ENST00000393120 SF3B3Q15393 1217 aaKnown RBP16.83■□□□□ 0.28
MKS1-203ENST00000393120 UVSSAQ2YD98 709 aa16.83■□□□□ 0.28
MKS1-203ENST00000393120 IFFO2Q5TF58 517 aa16.83■□□□□ 0.28
MKS1-203ENST00000393120 LINC00116Q8NCU8 138 aa16.83■□□□□ 0.28
MKS1-203ENST00000393120 CDC5LQ99459 802 aaKnown RBP16.83■□□□□ 0.28
MKS1-203ENST00000393120 LAMB2P55268 1798 aa16.83■□□□□ 0.28
MKS1-203ENST00000393120 FAM177BA6PVY3 158 aa16.82■□□□□ 0.28
MKS1-203ENST00000393120 PRC1O43663 620 aa16.82■□□□□ 0.28
MKS1-203ENST00000393120 HAND2P61296 217 aa16.82■□□□□ 0.28
MKS1-203ENST00000393120 MAP3K12Q12852 859 aa16.82■□□□□ 0.28
MKS1-203ENST00000393120 RASGRF1Q13972 1273 aa16.82■□□□□ 0.28
MKS1-203ENST00000393120 RC3H1Q5TC82 1133 aaKnown RBP16.82■□□□□ 0.28
MKS1-203ENST00000393120 ATL3Q6DD88 541 aa16.82■□□□□ 0.28
MKS1-203ENST00000393120 RALYLQ86SE5 291 aaKnown RBP16.82■□□□□ 0.28
MKS1-203ENST00000393120 RGS22Q8NE09 1264 aa16.82■□□□□ 0.28
MKS1-203ENST00000393120 DDX11Q96FC9 970 aa16.82■□□□□ 0.28
MKS1-203ENST00000393120 NGLY1Q96IV0 654 aa16.82■□□□□ 0.28
MKS1-203ENST00000393120 STRBPQ96SI9 672 aaKnown RBP16.82■□□□□ 0.28
MKS1-203ENST00000393120 DHX16O60231 1041 aaKnown RBP16.82■□□□□ 0.28
MKS1-203ENST00000393120 CLCN1P35523 988 aa16.82■□□□□ 0.28
MKS1-203ENST00000393120 SLC10A5Q5PT55 438 aa16.82■□□□□ 0.28
MKS1-203ENST00000393120 FAM173BQ6P4H8 233 aa16.82■□□□□ 0.28
MKS1-203ENST00000393120 LEO1Q8WVC0 666 aaPredicted RBP16.82■□□□□ 0.28
MKS1-203ENST00000393120 SPATA32Q96LK8 384 aa16.82■□□□□ 0.28
MKS1-203ENST00000393120 CFAP45Q9UL16 551 aa16.82■□□□□ 0.28
MKS1-203ENST00000393120 WWC3Q9ULE0 1092 aa16.82■□□□□ 0.28
MKS1-203ENST00000393120 BCORQ6W2J9 1755 aa16.81■□□□□ 0.28
MKS1-203ENST00000393120 ANTXR2P58335 489 aa16.81■□□□□ 0.28
MKS1-203ENST00000393120 CCT2P78371 535 aaKnown RBP16.81■□□□□ 0.28
MKS1-203ENST00000393120 CHST3Q7LGC8 479 aa16.81■□□□□ 0.28
MKS1-203ENST00000393120 PATL2C9JE40 543 aaKnown RBP16.8■□□□□ 0.28
MKS1-203ENST00000393120 CHRNDQ07001 517 aa16.8■□□□□ 0.28
MKS1-203ENST00000393120 FUCA2Q9BTY2 467 aa16.8■□□□□ 0.28
MKS1-203ENST00000393120 NBPF3Q9H094 633 aa16.8■□□□□ 0.28
MKS1-203ENST00000393120 TRDNQ13061 729 aa16.8■□□□□ 0.28
MKS1-203ENST00000393120 AIDAQ96BJ3 306 aa16.8■□□□□ 0.28
MKS1-203ENST00000393120 C8orf37Q96NL8 207 aa16.8■□□□□ 0.28
MKS1-203ENST00000393120 NCOA5Q9HCD5 579 aaKnown RBP16.8■□□□□ 0.28
MKS1-203ENST00000393120 TFIP11Q9UBB9 837 aaKnown RBP16.8■□□□□ 0.28
MKS1-203ENST00000393120 ADD1P35611 737 aaKnown RBP16.79■□□□□ 0.28
MKS1-203ENST00000393120 BCAMP50895 628 aa16.78■□□□□ 0.28
MKS1-203ENST00000393120 ERFEQ4G0M1 354 aa16.78■□□□□ 0.28
MKS1-203ENST00000393120 BSDC1Q9NW68 430 aaPredicted RBP16.78■□□□□ 0.28
MKS1-203ENST00000393120 HPS5Q9UPZ3 1129 aa16.78■□□□□ 0.28
MKS1-203ENST00000393120 ZNF804BA4D1E1 1349 aa16.78■□□□□ 0.28
MKS1-203ENST00000393120 GOLGA6L4A6NEF3 574 aa16.78■□□□□ 0.28
MKS1-203ENST00000393120 SNAP23O00161 211 aa16.78■□□□□ 0.28
MKS1-203ENST00000393120 RPS6KA4O75676 772 aa16.78■□□□□ 0.28
MKS1-203ENST00000393120 APPP05067 770 aa16.78■□□□□ 0.28
MKS1-203ENST00000393120 FDPSP14324 419 aaKnown RBP16.78■□□□□ 0.28
MKS1-203ENST00000393120 GNAT2P19087 354 aa16.78■□□□□ 0.28
MKS1-203ENST00000393120 ANKRD18AQ8IVF6 992 aa16.78■□□□□ 0.28
MKS1-203ENST00000393120 MAGEB6Q8N7X4 407 aa16.78■□□□□ 0.28
MKS1-203ENST00000393120 RNF214Q8ND24 703 aa16.78■□□□□ 0.28
MKS1-203ENST00000393120 GPHNQ9NQX3 736 aaPredicted RBP16.78■□□□□ 0.28
MKS1-203ENST00000393120 NARFQ9UHQ1 456 aa16.78■□□□□ 0.28
MKS1-203ENST00000393120 PNPLA7Q6ZV29 1317 aa16.77■□□□□ 0.28
MKS1-203ENST00000393120 CARMIL3Q8ND23 1372 aa16.77■□□□□ 0.28
MKS1-203ENST00000393120 KLF18A0A0U1RQI7 1052 aa16.77■□□□□ 0.28
MKS1-203ENST00000393120 UBAP1LF5GYI3 381 aa16.77■□□□□ 0.28
MKS1-203ENST00000393120 UBE4AQ14139 1066 aa16.77■□□□□ 0.28
MKS1-203ENST00000393120 TBC1D10CQ8IV04 446 aa16.77■□□□□ 0.28
MKS1-203ENST00000393120 TMEM87BQ96K49 555 aa16.77■□□□□ 0.28
MKS1-203ENST00000393120 BCL2L12Q9HB09 334 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms