RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 PAXIP1Q6ZW49 1069 aaPredicted RBP12.68□□□□□ -0.38
BRF1-204ENST00000392557 KBTBD3Q8NAB2 608 aa12.68□□□□□ -0.38
BRF1-204ENST00000392557 PCCAP05165 728 aaPredicted RBP12.67□□□□□ -0.38
BRF1-204ENST00000392557 FAM98CQ17RN3 349 aaKnown RBP12.67□□□□□ -0.38
BRF1-204ENST00000392557 CEP135Q66GS9 1140 aa12.67□□□□□ -0.38
BRF1-204ENST00000392557 XAGE2Q96GT9 111 aa12.67□□□□□ -0.38
BRF1-204ENST00000392557 CLSTN2Q9H4D0 955 aa12.67□□□□□ -0.38
BRF1-204ENST00000392557 PLEKHG2Q9H7P9 1386 aa12.67□□□□□ -0.38
BRF1-204ENST00000392557 SMC2O95347 1197 aa12.67□□□□□ -0.38
BRF1-204ENST00000392557 PTPN14Q15678 1187 aa12.67□□□□□ -0.38
BRF1-204ENST00000392557 CACTINQ8WUQ7 758 aaKnown RBP12.67□□□□□ -0.38
BRF1-204ENST00000392557 ABCA3Q99758 1704 aa12.67□□□□□ -0.38
BRF1-204ENST00000392557 KCNQ2O43526 872 aa12.66□□□□□ -0.38
BRF1-204ENST00000392557 SKILP12757 684 aa12.66□□□□□ -0.38
BRF1-204ENST00000392557 ROBO1Q9Y6N7 1651 aa12.66□□□□□ -0.38
BRF1-204ENST00000392557 SMIM5Q71RC9 77 aa12.66□□□□□ -0.38
BRF1-204ENST00000392557 NGLY1Q96IV0 654 aa12.66□□□□□ -0.38
BRF1-204ENST00000392557 TNS2Q63HR2 1409 aa12.66□□□□□ -0.38
BRF1-204ENST00000392557 ANKRD18BA2A2Z9 1011 aa12.66□□□□□ -0.38
BRF1-204ENST00000392557 BIN1O00499 593 aa12.66□□□□□ -0.38
BRF1-204ENST00000392557 FAM182BQ5T319 152 aa12.66□□□□□ -0.38
BRF1-204ENST00000392557 NCOA5Q9HCD5 579 aaKnown RBP12.66□□□□□ -0.38
BRF1-204ENST00000392557 ZNF609O15014 1411 aa12.66□□□□□ -0.38
BRF1-204ENST00000392557 SNAP23O00161 211 aa12.65□□□□□ -0.38
BRF1-204ENST00000392557 TOB2Q14106 344 aaPredicted RBP12.65□□□□□ -0.38
BRF1-204ENST00000392557 KRT32Q14532 448 aa12.65□□□□□ -0.38
BRF1-204ENST00000392557 ISM2Q6H9L7 571 aa12.65□□□□□ -0.38
BRF1-204ENST00000392557 BICDL1Q6ZP65 573 aa12.65□□□□□ -0.38
BRF1-204ENST00000392557 MARCH10Q8NA82 808 aaPredicted RBP12.65□□□□□ -0.38
BRF1-204ENST00000392557 BCL9O00512 1426 aa12.65□□□□□ -0.38
BRF1-204ENST00000392557 GLI3P10071 1580 aa12.65□□□□□ -0.38
BRF1-204ENST00000392557 HAND2P61296 217 aa12.65□□□□□ -0.38
BRF1-204ENST00000392557 DMTNQ08495 405 aa12.65□□□□□ -0.38
BRF1-204ENST00000392557 APOBRQ0VD83 1088 aa12.65□□□□□ -0.38
BRF1-204ENST00000392557 SCARF1Q14162 830 aa12.65□□□□□ -0.38
BRF1-204ENST00000392557 FSIP1Q8NA03 581 aa12.65□□□□□ -0.38
BRF1-204ENST00000392557 PGBD1Q96JS3 809 aa12.65□□□□□ -0.38
BRF1-204ENST00000392557 LAMB4A4D0S4 1761 aa12.65□□□□□ -0.38
BRF1-204ENST00000392557 ZSCAN20P17040 1043 aaPredicted RBP12.65□□□□□ -0.38
BRF1-204ENST00000392557 CCDC144BQ3MJ40 725 aa12.65□□□□□ -0.38
BRF1-204ENST00000392557 CCDC144CPQ8IYA2 1237 aa12.65□□□□□ -0.38
BRF1-204ENST00000392557 TTLL11Q8NHH1 800 aa12.65□□□□□ -0.38
BRF1-204ENST00000392557 AKAP2Q9Y2D5 859 aa12.65□□□□□ -0.38
BRF1-204ENST00000392557 NHSL1Q5SYE7 1610 aa12.65□□□□□ -0.39
BRF1-204ENST00000392557 A0A0G2JLW4 131 aa12.64□□□□□ -0.39
BRF1-204ENST00000392557 SMTNL1A8MU46 457 aa12.64□□□□□ -0.39
BRF1-204ENST00000392557 UBAP1LF5GYI3 381 aa12.64□□□□□ -0.39
BRF1-204ENST00000392557 GTF2F1P35269 517 aaKnown RBP eCLIP12.64□□□□□ -0.39
BRF1-204ENST00000392557 CRKLP46109 303 aaKnown RBP12.64□□□□□ -0.39
BRF1-204ENST00000392557 HOMER1Q86YM7 354 aa12.64□□□□□ -0.39
BRF1-204ENST00000392557 COL15A1P39059 1388 aa12.64□□□□□ -0.39
BRF1-204ENST00000392557 MED23Q9ULK4 1368 aa12.64□□□□□ -0.39
BRF1-204ENST00000392557 TOGARAM1Q9Y4F4 1720 aa12.64□□□□□ -0.39
BRF1-204ENST00000392557 SPATA31A1Q5TZJ5 1347 aa12.64□□□□□ -0.39
BRF1-204ENST00000392557 LOC102724428A0A0B4J2F2 783 aa12.64□□□□□ -0.39
BRF1-204ENST00000392557 CYP21A2P08686 494 aa12.64□□□□□ -0.39
BRF1-204ENST00000392557 ZAP70P43403 619 aa12.64□□□□□ -0.39
BRF1-204ENST00000392557 CTSWP56202 376 aa12.64□□□□□ -0.39
BRF1-204ENST00000392557 SIK1P57059 783 aa12.64□□□□□ -0.39
BRF1-204ENST00000392557 AOPEPQ8N6M6 819 aa12.64□□□□□ -0.39
BRF1-204ENST00000392557 TTLL5Q6EMB2 1281 aa12.64□□□□□ -0.39
BRF1-204ENST00000392557 C11orf57Q6ZUT1 292 aaPredicted RBP12.64□□□□□ -0.39
BRF1-204ENST00000392557 HMG20BQ9P0W2 317 aa12.64□□□□□ -0.39
BRF1-204ENST00000392557 NRDCO43847 1150 aa12.63□□□□□ -0.39
BRF1-204ENST00000392557 IDH1O75874 414 aaKnown RBP12.63□□□□□ -0.39
BRF1-204ENST00000392557 POLR3DP05423 398 aaPredicted RBP12.63□□□□□ -0.39
BRF1-204ENST00000392557 U3KPZ7 1027 aaPredicted RBP12.63□□□□□ -0.39
BRF1-204ENST00000392557 CCDC69A6NI79 296 aa12.63□□□□□ -0.39
BRF1-204ENST00000392557 NCBP1Q09161 790 aaKnown RBP12.63□□□□□ -0.39
BRF1-204ENST00000392557 GNL2Q13823 731 aaKnown RBP12.63□□□□□ -0.39
BRF1-204ENST00000392557 STX1AQ16623 288 aa12.63□□□□□ -0.39
BRF1-204ENST00000392557 CEP57L1Q8IYX8 460 aa12.63□□□□□ -0.39
BRF1-204ENST00000392557 GTF3C6Q969F1 213 aa12.63□□□□□ -0.39
BRF1-204ENST00000392557 CCDC87Q9NVE4 849 aa12.63□□□□□ -0.39
BRF1-204ENST00000392557 NIP7Q9Y221 180 aaKnown RBP eCLIP12.63□□□□□ -0.39
BRF1-204ENST00000392557 ELP1O95163 1332 aa12.63□□□□□ -0.39
BRF1-204ENST00000392557 STK38Q15208 465 aa12.63□□□□□ -0.39
BRF1-204ENST00000392557 PAXBP1Q9Y5B6 917 aa12.63□□□□□ -0.39
BRF1-204ENST00000392557 SHANK3Q9BYB0 1731 aa12.62□□□□□ -0.39
BRF1-204ENST00000392557 UBN2Q6ZU65 1347 aa12.62□□□□□ -0.39
BRF1-204ENST00000392557 RNF113AO15541 343 aaKnown RBP12.62□□□□□ -0.39
BRF1-204ENST00000392557 TOM1O60784 492 aa12.62□□□□□ -0.39
BRF1-204ENST00000392557 CIAO1O76071 339 aa12.62□□□□□ -0.39
BRF1-204ENST00000392557 APPP05067 770 aa12.62□□□□□ -0.39
BRF1-204ENST00000392557 OTUD7BQ6GQQ9 843 aa12.62□□□□□ -0.39
BRF1-204ENST00000392557 MPHOSPH8Q99549 860 aa12.62□□□□□ -0.39
BRF1-204ENST00000392557 A0A1B0GVL5 298 aa12.62□□□□□ -0.39
BRF1-204ENST00000392557 PTPDC1A2A3K4 754 aa12.62□□□□□ -0.39
BRF1-204ENST00000392557 IL6STP40189 918 aaPredicted RBP12.62□□□□□ -0.39
BRF1-204ENST00000392557 TRIM28Q13263 835 aaKnown RBP12.62□□□□□ -0.39
BRF1-204ENST00000392557 ZNF396Q96N95 335 aaPredicted RBP12.62□□□□□ -0.39
BRF1-204ENST00000392557 NAT10Q9H0A0 1025 aaKnown RBP12.62□□□□□ -0.39
BRF1-204ENST00000392557 USP27XA6NNY8 438 aa12.61□□□□□ -0.39
BRF1-204ENST00000392557 M0R2C6 588 aa12.61□□□□□ -0.39
BRF1-204ENST00000392557 CPLX1O14810 134 aa12.61□□□□□ -0.39
BRF1-204ENST00000392557 GTF2E1P29083 439 aaPredicted RBP12.61□□□□□ -0.39
BRF1-204ENST00000392557 ITPK1Q13572 414 aa12.61□□□□□ -0.39
BRF1-204ENST00000392557 SUSD4Q5VX71 490 aa12.61□□□□□ -0.39
BRF1-204ENST00000392557 FAM177A1Q8N128 213 aaPredicted RBP12.61□□□□□ -0.39
BRF1-204ENST00000392557 IL17RAQ96F46 866 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms