RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 ZBTB33Q86T24 672 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 CADPS2Q86UW7 1296 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 FAM35AQ86V20 835 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 PRIMA1Q86XR5 153 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 CCDC125Q86Z20 511 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 IFNLR1Q8IU57 520 aaPredicted RBP0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 IRF2BP1Q8IU81 584 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 FOXP4Q8IVH2 680 aaPredicted RBP0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 SEPT12Q8IYM1 358 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 PLD6Q8N2A8 252 aaKnown RBP0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 ZNF843Q8N446 348 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 LINC01356Q8N9X3 169 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 RHBDD1Q8TEB9 315 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 TTC9Q92623 222 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 CCDC120Q96HB5 630 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 HRASLS5Q96KN8 279 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 SIGLEC10Q96LC7 697 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 BBC3Q96PG8 261 aaPredicted RBP0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 PPP1R10Q96QC0 940 aaKnown RBP0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 SLC30A3Q99726 388 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 ARHGAP9Q9BRR9 750 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 ESYT1Q9BSJ8 1104 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 YIPF2Q9BWQ6 316 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 KRTAP4-1Q9BYQ7 146 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 MCOLN1Q9GZU1 580 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 RNF208Q9H0X6 261 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 MUC3BQ9H195 1237 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 ESF1Q9H501 851 aaKnown RBP0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 IGFLR1Q9H665 355 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 EFCC1Q9HA90 598 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 LGR6Q9HBX8 967 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 ARHGEF10LQ9HCE6 1279 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 DNAJB12Q9NXW2 375 aaKnown RBP0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 ZDHHC3Q9NYG2 299 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 PRKAG2Q9UGJ0 569 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 CRCT1Q9UGL9 99 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 ZNF112Q9UJU3 913 aa0.11□□□□□ -2.39
TRAJ28-201ENST00000390509 NPIPB8E9PQR5 432 aa0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 ZBTB7BO15156 539 aaPredicted RBP0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 ZFPL1O95159 310 aa0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 PLATP00750 562 aa0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 GNRH1P01148 92 aa0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 IL2RAP01589 272 aa0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 CPB1P15086 417 aa0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 AZU1P20160 251 aa0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 TNFRSF1BP20333 461 aa0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 BMP5P22003 454 aa0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 MT3P25713 68 aa0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 CD38P28907 300 aa0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 CCKBRP32239 447 aa0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 CD68P34810 354 aaPredicted RBP0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 SELENOPP49908 381 aa0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 USP11P51784 963 aa0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 SLURP1P55000 103 aa0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 GJA9P57773 515 aa0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 ERVK-9P63128 1117 aa0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 MTMR2Q13614 643 aa0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 COL9A2Q14055 689 aaPredicted RBP0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 NFKBIBQ15653 356 aa0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 DUOXA2Q1HG44 320 aa0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 NBPF9Q3BBW0 867 aa0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 CYP27C1Q4G0S4 372 aa0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 PRR16Q569H4 304 aa0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 ESCO1Q5FWF5 840 aa0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 PERM1Q5SV97 790 aa0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 KANK4Q5T7N3 995 aaPredicted RBP0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 CC2D2BQ6DHV5 1058 aa0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 FBXL22Q6P050 247 aa0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 ARHGAP27Q6ZUM4 889 aa0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 MRGPRGQ86SM5 289 aa0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 ZNF605Q86T29 641 aa0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 FERMT3Q86UX7 667 aa0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 LDLRAD3Q86YD5 345 aa0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 PPARGC1BQ86YN6 1023 aaKnown RBP0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 HS6ST3Q8IZP7 471 aa0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 SHISA5Q8N114 240 aa0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 CACTIN-AS1Q8N1I8 211 aa0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 SPEM1Q8N4L4 309 aa0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 Q8N9P0 234 aaPredicted RBP0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 KLHL23Q8NBE8 558 aa0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 SMRP1Q8NCR6 262 aa0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 ABHD4Q8TB40 342 aa0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 PANK1Q8TE04 598 aa0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 SCARB1Q8WTV0 552 aa0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 ASB11Q8WXH4 323 aa0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 SMG7Q92540 1137 aaKnown RBP0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 GATA6Q92908 595 aa0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 BHMTQ93088 406 aa0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 CNKSR1Q969H4 720 aa0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 RBM15Q96T37 977 aaKnown RBP eCLIP0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 AGAP2Q99490 1192 aa0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 LPIN3Q9BQK8 851 aa0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 NIFKQ9BYG3 293 aaKnown RBP0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 FHDC1Q9C0D6 1143 aaPredicted RBP0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 KLC2Q9H0B6 622 aa0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 SLC6A17Q9H1V8 727 aa0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 SEMA4AQ9H3S1 761 aa0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 MKNK2Q9HBH9 465 aa0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 GCM1Q9NP62 436 aa0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 PRDM7Q9NQW5 492 aa0.1□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms