RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 PPIP5K2O43314 1243 aa11.78□□□□□ -0.52
PKP4-201ENST00000389757 PARP1P09874 1014 aaKnown RBP11.78□□□□□ -0.52
PKP4-201ENST00000389757 HSP90AA2PQ14568 343 aaPredicted RBP11.78□□□□□ -0.52
PKP4-201ENST00000389757 KCNG4Q8TDN1 519 aa11.78□□□□□ -0.52
PKP4-201ENST00000389757 TOP1P11387 765 aaKnown RBP11.77□□□□□ -0.52
PKP4-201ENST00000389757 FAM114A1Q8IWE2 563 aa11.77□□□□□ -0.52
PKP4-201ENST00000389757 ARMT1Q9H993 441 aa11.77□□□□□ -0.52
PKP4-201ENST00000389757 EXOC1Q9NV70 894 aa11.77□□□□□ -0.52
PKP4-201ENST00000389757 ABCC3O15438 1527 aa11.77□□□□□ -0.52
PKP4-201ENST00000389757 PRKCSHP14314 528 aaPredicted RBP11.77□□□□□ -0.52
PKP4-201ENST00000389757 CTSWP56202 376 aa11.77□□□□□ -0.52
PKP4-201ENST00000389757 IQCEQ6IPM2 695 aa11.77□□□□□ -0.52
PKP4-201ENST00000389757 RMND1Q9NWS8 449 aa11.77□□□□□ -0.52
PKP4-201ENST00000389757 ZNF408Q9H9D4 720 aa11.77□□□□□ -0.53
PKP4-201ENST00000389757 ARHGEF10LQ9HCE6 1279 aa11.77□□□□□ -0.53
PKP4-201ENST00000389757 RBM28Q9NW13 759 aaKnown RBP11.77□□□□□ -0.53
PKP4-201ENST00000389757 BCS1LQ9Y276 419 aa11.77□□□□□ -0.53
PKP4-201ENST00000389757 APOBRQ0VD83 1088 aa11.77□□□□□ -0.53
PKP4-201ENST00000389757 TMOD4Q9NZQ9 345 aa11.77□□□□□ -0.53
PKP4-201ENST00000389757 TRIM75PA6NK02 468 aa11.77□□□□□ -0.53
PKP4-201ENST00000389757 STAT6P42226 847 aa11.77□□□□□ -0.53
PKP4-201ENST00000389757 SYKP43405 635 aa11.77□□□□□ -0.53
PKP4-201ENST00000389757 KRT27Q7Z3Y8 459 aa11.77□□□□□ -0.53
PKP4-201ENST00000389757 TRIM37O94972 964 aa11.76□□□□□ -0.53
PKP4-201ENST00000389757 UBE2HP62256 183 aa11.76□□□□□ -0.53
PKP4-201ENST00000389757 STX1AQ16623 288 aa11.76□□□□□ -0.53
PKP4-201ENST00000389757 PRDM15P57071 1507 aaPredicted RBP11.76□□□□□ -0.53
PKP4-201ENST00000389757 SPATA5Q8NB90 893 aa11.76□□□□□ -0.53
PKP4-201ENST00000389757 CCDC174Q6PII3 467 aa11.76□□□□□ -0.53
PKP4-201ENST00000389757 C2CD5Q86YS7 1000 aa11.76□□□□□ -0.53
PKP4-201ENST00000389757 SPDYE4A6NLX3 237 aa11.76□□□□□ -0.53
PKP4-201ENST00000389757 SKIDA1Q1XH10 827 aa11.76□□□□□ -0.53
PKP4-201ENST00000389757 TTLL7Q6ZT98 887 aa11.76□□□□□ -0.53
PKP4-201ENST00000389757 KRT2P35908 639 aa11.75□□□□□ -0.53
PKP4-201ENST00000389757 ENOX2Q16206 610 aaKnown RBP11.75□□□□□ -0.53
PKP4-201ENST00000389757 UNC5CLQ8IV45 518 aa11.75□□□□□ -0.53
PKP4-201ENST00000389757 CCDC112Q8NEF3 446 aa11.75□□□□□ -0.53
PKP4-201ENST00000389757 AATFQ9NY61 560 aaKnown RBP eCLIP11.75□□□□□ -0.531e-7■■□□□ 14.3
PKP4-201ENST00000389757 ANKARQ7Z5J8 1434 aa11.75□□□□□ -0.53
PKP4-201ENST00000389757 AOX1Q06278 1338 aa11.75□□□□□ -0.53
PKP4-201ENST00000389757 CRKLP46109 303 aaKnown RBP11.75□□□□□ -0.53
PKP4-201ENST00000389757 DLGAP5Q15398 846 aa11.75□□□□□ -0.53
PKP4-201ENST00000389757 GPR162Q16538 588 aa11.75□□□□□ -0.53
PKP4-201ENST00000389757 USPL1Q5W0Q7 1092 aa11.75□□□□□ -0.53
PKP4-201ENST00000389757 TDRD12Q587J7 1177 aaKnown RBP11.75□□□□□ -0.53
PKP4-201ENST00000389757 BRINP3Q76B58 766 aa11.75□□□□□ -0.53
PKP4-201ENST00000389757 NUP88Q99567 741 aaPredicted RBP11.75□□□□□ -0.53
PKP4-201ENST00000389757 ZKSCAN3Q9BRR0 538 aa11.75□□□□□ -0.53
PKP4-201ENST00000389757 ZMYM4Q5VZL5 1548 aa11.75□□□□□ -0.53
PKP4-201ENST00000389757 PRR36Q9H6K5 1346 aa11.75□□□□□ -0.53
PKP4-201ENST00000389757 GPAA1O43292 621 aa11.75□□□□□ -0.53
PKP4-201ENST00000389757 RUFY3Q7L099 469 aa11.75□□□□□ -0.53
PKP4-201ENST00000389757 ZBTB38Q8NAP3 1195 aaPredicted RBP11.75□□□□□ -0.53
PKP4-201ENST00000389757 ASAP1Q9ULH1 1129 aa11.75□□□□□ -0.53
PKP4-201ENST00000389757 KDRP35968 1356 aa11.75□□□□□ -0.53
PKP4-201ENST00000389757 ERBB3P21860 1342 aa11.75□□□□□ -0.53
PKP4-201ENST00000389757 IGSF1Q8N6C5 1336 aa11.75□□□□□ -0.53
PKP4-201ENST00000389757 PNMA6EA0A0J9YXQ4 647 aa11.75□□□□□ -0.53
PKP4-201ENST00000389757 YEATS4O95619 227 aa11.75□□□□□ -0.53
PKP4-201ENST00000389757 SETQ01105 290 aaPredicted RBP11.75□□□□□ -0.53
PKP4-201ENST00000389757 KBTBD3Q8NAB2 608 aa11.75□□□□□ -0.53
PKP4-201ENST00000389757 CNKSR1Q969H4 720 aa11.75□□□□□ -0.53
PKP4-201ENST00000389757 MAP3K15Q6ZN16 1313 aa11.74□□□□□ -0.53
PKP4-201ENST00000389757 AK2P54819 239 aa11.74□□□□□ -0.53
PKP4-201ENST00000389757 KRT79Q5XKE5 535 aa11.74□□□□□ -0.53
PKP4-201ENST00000389757 USP37Q86T82 979 aa11.74□□□□□ -0.53
PKP4-201ENST00000389757 SHROOM2Q13796 1616 aa11.74□□□□□ -0.53
PKP4-201ENST00000389757 H7C1D1 291 aa11.74□□□□□ -0.53
PKP4-201ENST00000389757 ARHGAP31Q2M1Z3 1444 aa11.74□□□□□ -0.53
PKP4-201ENST00000389757 PCCAP05165 728 aaPredicted RBP11.74□□□□□ -0.53
PKP4-201ENST00000389757 NEFHP12036 1026 aa11.74□□□□□ -0.53
PKP4-201ENST00000389757 USP8P40818 1118 aa11.74□□□□□ -0.53
PKP4-201ENST00000389757 CCDC129Q6ZRS4 1044 aa11.74□□□□□ -0.53
PKP4-201ENST00000389757 TMEM87BQ96K49 555 aa11.74□□□□□ -0.53
PKP4-201ENST00000389757 TRIM47Q96LD4 638 aa11.74□□□□□ -0.53
PKP4-201ENST00000389757 B4E1Z4 1266 aa11.74□□□□□ -0.53
PKP4-201ENST00000389757 ECM2O94769 699 aaPredicted RBP11.74□□□□□ -0.53
PKP4-201ENST00000389757 ARAP3Q8WWN8 1544 aa11.74□□□□□ -0.53
PKP4-201ENST00000389757 KIF24Q5T7B8 1368 aa11.73□□□□□ -0.53
PKP4-201ENST00000389757 ZSCAN12O43309 604 aa11.73□□□□□ -0.53
PKP4-201ENST00000389757 MAP3K4Q9Y6R4 1608 aa11.73□□□□□ -0.53
PKP4-201ENST00000389757 PTPDC1A2A3K4 754 aa11.73□□□□□ -0.53
PKP4-201ENST00000389757 GOLGA6L10A6NI86 522 aa11.73□□□□□ -0.53
PKP4-201ENST00000389757 RXRAP19793 462 aa11.73□□□□□ -0.53
PKP4-201ENST00000389757 ATP2B4P23634 1241 aa11.73□□□□□ -0.53
PKP4-201ENST00000389757 IL6STP40189 918 aaPredicted RBP11.73□□□□□ -0.53
PKP4-201ENST00000389757 DRC1Q96MC2 740 aa11.73□□□□□ -0.53
PKP4-201ENST00000389757 GPCPD1Q9NPB8 672 aa11.73□□□□□ -0.53
PKP4-201ENST00000389757 AFMP43652 599 aa11.73□□□□□ -0.53
PKP4-201ENST00000389757 MRPS27Q92552 414 aaKnown RBP11.73□□□□□ -0.53
PKP4-201ENST00000389757 NAP1L4Q99733 375 aaKnown RBP11.73□□□□□ -0.53
PKP4-201ENST00000389757 GTF2IP78347 998 aa11.73□□□□□ -0.53
PKP4-201ENST00000389757 CAVIN2O95810 425 aa11.73□□□□□ -0.53
PKP4-201ENST00000389757 ZAP70P43403 619 aa11.73□□□□□ -0.53
PKP4-201ENST00000389757 ZNF771Q7L3S4 317 aaPredicted RBP11.73□□□□□ -0.53
PKP4-201ENST00000389757 RRAGBQ5VZM2 374 aa11.72□□□□□ -0.53
PKP4-201ENST00000389757 CPLX3Q8WVH0 158 aa11.72□□□□□ -0.53
PKP4-201ENST00000389757 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.72□□□□□ -0.53
PKP4-201ENST00000389757 THRAP3Q9Y2W1 955 aaKnown RBP11.72□□□□□ -0.53
PKP4-201ENST00000389757 PATL2C9JE40 543 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms