RNA–Protein interactions for RNA: ENST00000381160.7

NPC1L1-202, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1L1, Length 4,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-202ENST00000381160 ZRANB2O95218 330 aaKnown RBP eCLIP12.85□□□□□ -0.35
NPC1L1-202ENST00000381160 PFKFB1P16118 471 aa12.85□□□□□ -0.35
NPC1L1-202ENST00000381160 SLC20A2Q08357 652 aa12.85□□□□□ -0.35
NPC1L1-202ENST00000381160 TFCP2Q12800 502 aa12.85□□□□□ -0.35
NPC1L1-202ENST00000381160 GOLGA5Q8TBA6 731 aa12.85□□□□□ -0.35
NPC1L1-202ENST00000381160 DRC1Q96MC2 740 aa12.85□□□□□ -0.35
NPC1L1-202ENST00000381160 LLPHQ9BRT6 129 aaKnown RBP12.85□□□□□ -0.35
NPC1L1-202ENST00000381160 FANCLQ9NW38 375 aa12.85□□□□□ -0.35
NPC1L1-202ENST00000381160 PARP3Q9Y6F1 533 aa12.85□□□□□ -0.35
NPC1L1-202ENST00000381160 USP42Q9H9J4 1324 aaKnown RBP12.84□□□□□ -0.35
NPC1L1-202ENST00000381160 PIP4K2AP48426 406 aaPredicted RBP12.84□□□□□ -0.35
NPC1L1-202ENST00000381160 MPHOSPH8Q99549 860 aa12.84□□□□□ -0.35
NPC1L1-202ENST00000381160 DBNDD2Q9BQY9 259 aa12.84□□□□□ -0.35
NPC1L1-202ENST00000381160 GPHNQ9NQX3 736 aaPredicted RBP12.84□□□□□ -0.35
NPC1L1-202ENST00000381160 PRAMEF22A3QJZ6 481 aa12.84□□□□□ -0.35
NPC1L1-202ENST00000381160 ARHGAP6O43182 974 aa12.84□□□□□ -0.35
NPC1L1-202ENST00000381160 ADD1P35611 737 aaKnown RBP12.84□□□□□ -0.35
NPC1L1-202ENST00000381160 CHMP4BP1P59074 171 aa12.84□□□□□ -0.35
NPC1L1-202ENST00000381160 CNNM3Q8NE01 707 aa12.84□□□□□ -0.35
NPC1L1-202ENST00000381160 MYD88Q99836 296 aa12.84□□□□□ -0.35
NPC1L1-202ENST00000381160 ADCY9O60503 1353 aa12.84□□□□□ -0.35
NPC1L1-202ENST00000381160 TTC31Q49AM3 519 aaPredicted RBP12.84□□□□□ -0.35
NPC1L1-202ENST00000381160 SPECC1Q5M775 1068 aa12.84□□□□□ -0.35
NPC1L1-202ENST00000381160 RALYLQ86SE5 291 aaKnown RBP12.84□□□□□ -0.35
NPC1L1-202ENST00000381160 HECW2Q9P2P5 1572 aa12.84□□□□□ -0.35
NPC1L1-202ENST00000381160 IGSF1Q8N6C5 1336 aa12.83□□□□□ -0.35
NPC1L1-202ENST00000381160 WDHD1O75717 1129 aaPredicted RBP12.83□□□□□ -0.36
NPC1L1-202ENST00000381160 ALDH1L1O75891 902 aa12.83□□□□□ -0.36
NPC1L1-202ENST00000381160 KLHL10Q6JEL2 608 aa12.83□□□□□ -0.36
NPC1L1-202ENST00000381160 IRX2Q9BZI1 471 aaPredicted RBP12.83□□□□□ -0.36
NPC1L1-202ENST00000381160 KLF18A0A0U1RQI7 1052 aa12.83□□□□□ -0.36
NPC1L1-202ENST00000381160 ACTN2P35609 894 aa12.83□□□□□ -0.36
NPC1L1-202ENST00000381160 LINC00301Q8NCQ3 95 aa12.83□□□□□ -0.36
NPC1L1-202ENST00000381160 NEO1Q92859 1461 aa12.83□□□□□ -0.36
NPC1L1-202ENST00000381160 SBNO1A3KN83 1393 aa12.83□□□□□ -0.36
NPC1L1-202ENST00000381160 MLH3Q9UHC1 1453 aa12.83□□□□□ -0.36
NPC1L1-202ENST00000381160 HOXC9P31274 260 aa12.83□□□□□ -0.36
NPC1L1-202ENST00000381160 STOX1Q6ZVD7 989 aa12.83□□□□□ -0.36
NPC1L1-202ENST00000381160 TRMT44Q8IYL2 757 aaKnown RBP12.83□□□□□ -0.36
NPC1L1-202ENST00000381160 FBXO18Q8NFZ0 1043 aa12.83□□□□□ -0.36
NPC1L1-202ENST00000381160 KIF5CO60282 957 aa12.82□□□□□ -0.36
NPC1L1-202ENST00000381160 CTDNEP1O95476 244 aa12.82□□□□□ -0.36
NPC1L1-202ENST00000381160 TOGARAM2Q6ZUX3 1019 aa12.82□□□□□ -0.36
NPC1L1-202ENST00000381160 RXRAP19793 462 aa12.82□□□□□ -0.36
NPC1L1-202ENST00000381160 AKAP17AQ02040 695 aaKnown RBP12.82□□□□□ -0.36
NPC1L1-202ENST00000381160 FKBP4Q02790 459 aaKnown RBP eCLIP12.82□□□□□ -0.36
NPC1L1-202ENST00000381160 DEF6Q9H4E7 631 aa12.82□□□□□ -0.36
NPC1L1-202ENST00000381160 DBNLQ9UJU6 430 aaKnown RBP12.82□□□□□ -0.36
NPC1L1-202ENST00000381160 DHX16O60231 1041 aaKnown RBP12.82□□□□□ -0.36
NPC1L1-202ENST00000381160 IVLP07476 585 aa12.82□□□□□ -0.36
NPC1L1-202ENST00000381160 LINS1Q8NG48 757 aa12.82□□□□□ -0.36
NPC1L1-202ENST00000381160 FAN1Q9Y2M0 1017 aa12.82□□□□□ -0.36
NPC1L1-202ENST00000381160 A0A0G2JLW4 131 aa12.81□□□□□ -0.36
NPC1L1-202ENST00000381160 GOLGA6L9A6NEM1 432 aa12.81□□□□□ -0.36
NPC1L1-202ENST00000381160 PDIA3P30101 505 aaKnown RBP12.81□□□□□ -0.36
NPC1L1-202ENST00000381160 HSP90AB3PQ58FF7 597 aa12.81□□□□□ -0.36
NPC1L1-202ENST00000381160 ZNF569Q5MCW4 686 aa12.81□□□□□ -0.36
NPC1L1-202ENST00000381160 MYSM1Q5VVJ2 828 aa12.81□□□□□ -0.36
NPC1L1-202ENST00000381160 ANO1Q5XXA6 986 aa12.81□□□□□ -0.36
NPC1L1-202ENST00000381160 ATL3Q6DD88 541 aa12.81□□□□□ -0.36
NPC1L1-202ENST00000381160 TRIM65Q6PJ69 517 aa12.81□□□□□ -0.36
NPC1L1-202ENST00000381160 SRLQ86TD4 932 aa12.81□□□□□ -0.36
NPC1L1-202ENST00000381160 PPFIBP1Q86W92 1011 aa12.81□□□□□ -0.36
NPC1L1-202ENST00000381160 RTEL1Q9NZ71 1219 aa12.81□□□□□ -0.36
NPC1L1-202ENST00000381160 H3BQF6 201 aa12.81□□□□□ -0.36
NPC1L1-202ENST00000381160 UBE3BQ7Z3V4 1068 aa12.81□□□□□ -0.36
NPC1L1-202ENST00000381160 JMYQ8N9B5 988 aa12.81□□□□□ -0.36
NPC1L1-202ENST00000381160 SMARCC2Q8TAQ2 1214 aa12.81□□□□□ -0.36
NPC1L1-202ENST00000381160 EXOC4Q96A65 974 aa12.81□□□□□ -0.36
NPC1L1-202ENST00000381160 SUGCTQ9HAC7 445 aa12.81□□□□□ -0.36
NPC1L1-202ENST00000381160 A0A1B0GUL7 405 aa12.81□□□□□ -0.36
NPC1L1-202ENST00000381160 VWA3AA6NCI4 1184 aa12.81□□□□□ -0.36
NPC1L1-202ENST00000381160 PES1O00541 588 aaKnown RBP12.81□□□□□ -0.36
NPC1L1-202ENST00000381160 TXLNAP40222 546 aa12.81□□□□□ -0.36
NPC1L1-202ENST00000381160 TRIM29Q14134 588 aa12.81□□□□□ -0.36
NPC1L1-202ENST00000381160 ZNF827Q17R98 1081 aa12.81□□□□□ -0.36
NPC1L1-202ENST00000381160 HDXQ7Z353 690 aa12.81□□□□□ -0.36
NPC1L1-202ENST00000381160 REXO1L1PQ8IX06 675 aa12.81□□□□□ -0.36
NPC1L1-202ENST00000381160 RABGGTAQ92696 567 aa12.81□□□□□ -0.36
NPC1L1-202ENST00000381160 RABEP2Q9H5N1 569 aa12.81□□□□□ -0.36
NPC1L1-202ENST00000381160 CARMIL3Q8ND23 1372 aa12.81□□□□□ -0.36
NPC1L1-202ENST00000381160 LOC102724159A0A0B4J2E5 919 aa12.81□□□□□ -0.36
NPC1L1-202ENST00000381160 E7EWF7 191 aa12.81□□□□□ -0.36
NPC1L1-202ENST00000381160 ATP5J2-PTCD1G3V325 749 aa12.81□□□□□ -0.36
NPC1L1-202ENST00000381160 ATP8B1O43520 1251 aa12.81□□□□□ -0.36
NPC1L1-202ENST00000381160 PTCD1O75127 700 aaKnown RBP12.81□□□□□ -0.36
NPC1L1-202ENST00000381160 PSME1Q06323 249 aa12.81□□□□□ -0.36
NPC1L1-202ENST00000381160 PWP2Q15269 919 aaKnown RBP12.81□□□□□ -0.36
NPC1L1-202ENST00000381160 MUM1L1Q5H9M0 696 aa12.81□□□□□ -0.36
NPC1L1-202ENST00000381160 SNRKQ9NRH2 765 aa12.81□□□□□ -0.36
NPC1L1-202ENST00000381160 TNNI3KQ59H18 835 aa12.8□□□□□ -0.36
NPC1L1-202ENST00000381160 CLIC6Q96NY7 704 aa12.8□□□□□ -0.36
NPC1L1-202ENST00000381160 FPGT-TNNI3KV9GXZ4 949 aa12.8□□□□□ -0.36
NPC1L1-202ENST00000381160 NPHP4O75161 1426 aaPredicted RBP12.8□□□□□ -0.36
NPC1L1-202ENST00000381160 CCDC175P0C221 793 aa12.8□□□□□ -0.36
NPC1L1-202ENST00000381160 GDAP1L1Q96MZ0 367 aa12.8□□□□□ -0.36
NPC1L1-202ENST00000381160 ACBD3Q9H3P7 528 aa12.8□□□□□ -0.36
NPC1L1-202ENST00000381160 A0A1W2PQ27 194 aa12.8□□□□□ -0.36
NPC1L1-202ENST00000381160 A0A1W2PQ64 194 aa12.8□□□□□ -0.36
NPC1L1-202ENST00000381160 A0A1W2PQD8 194 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms