RNA–Protein interactions for RNA: ENST00000380853.1

TTC39B-203, Transcript of tetratricopeptide repeat domain 39B, humanhuman

TSL 1 (best)

Gene TTC39B, Length 1,326 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-203ENST00000380853 RTKN2Q8IZC4 609 aa8.85□□□□□ -0.99
TTC39B-203ENST00000380853 TMX4Q9H1E5 349 aaPredicted RBP8.85□□□□□ -0.99
TTC39B-203ENST00000380853 ZNF277Q9NRM2 450 aaPredicted RBP8.85□□□□□ -0.99
TTC39B-203ENST00000380853 MYBBP1AQ9BQG0 1328 aaKnown RBP8.85□□□□□ -0.99
TTC39B-203ENST00000380853 ANKRD36CQ5JPF3 1778 aa8.85□□□□□ -0.99
TTC39B-203ENST00000380853 DDNO94850 711 aaPredicted RBP8.84□□□□□ -0.99
TTC39B-203ENST00000380853 WNT7BP56706 349 aa8.84□□□□□ -0.99
TTC39B-203ENST00000380853 GUCA2AQ02747 115 aa8.84□□□□□ -0.99
TTC39B-203ENST00000380853 DDX10Q13206 875 aaKnown RBP8.84□□□□□ -0.99
TTC39B-203ENST00000380853 NEUROD2Q15784 382 aa8.84□□□□□ -0.99
TTC39B-203ENST00000380853 TTLL7Q6ZT98 887 aa8.84□□□□□ -0.99
TTC39B-203ENST00000380853 SCN4AP35499 1836 aa8.83□□□□□ -1
TTC39B-203ENST00000380853 IARSP41252 1262 aaKnown RBP8.83□□□□□ -1
TTC39B-203ENST00000380853 RIC1Q4ADV7 1423 aa8.83□□□□□ -1
TTC39B-203ENST00000380853 EAPPQ56P03 285 aaPredicted RBP8.83□□□□□ -1
TTC39B-203ENST00000380853 PPP1R42Q7Z4L9 355 aa8.83□□□□□ -1
TTC39B-203ENST00000380853 CCDC146Q8IYE0 955 aa8.83□□□□□ -1
TTC39B-203ENST00000380853 JDP2Q8WYK2 163 aa8.83□□□□□ -1
TTC39B-203ENST00000380853 RBM17Q96I25 401 aaKnown RBP8.83□□□□□ -1
TTC39B-203ENST00000380853 LAS1LQ9Y4W2 734 aaKnown RBP8.83□□□□□ -1
TTC39B-203ENST00000380853 ZNF541Q9H0D2 1346 aa8.82□□□□□ -1
TTC39B-203ENST00000380853 TMPOP42166 694 aaKnown RBP8.82□□□□□ -1
TTC39B-203ENST00000380853 EIF6P56537 245 aaKnown RBP8.82□□□□□ -1
TTC39B-203ENST00000380853 PARP10Q53GL7 1025 aa8.82□□□□□ -1
TTC39B-203ENST00000380853 CC2D2BQ6DHV5 1058 aa8.82□□□□□ -1
TTC39B-203ENST00000380853 OLFM4Q6UX06 510 aa8.82□□□□□ -1
TTC39B-203ENST00000380853 SYNE4Q8N205 404 aa8.82□□□□□ -1
TTC39B-203ENST00000380853 DNAJC5GQ8N7S2 189 aa8.82□□□□□ -1
TTC39B-203ENST00000380853 UBN2Q6ZU65 1347 aa8.82□□□□□ -1
TTC39B-203ENST00000380853 KLRG2A4D1S0 409 aaPredicted RBP8.81□□□□□ -1
TTC39B-203ENST00000380853 TCERG1O14776 1098 aaKnown RBP8.81□□□□□ -1
TTC39B-203ENST00000380853 HOXA2O43364 376 aa8.81□□□□□ -1
TTC39B-203ENST00000380853 ANXA1P04083 346 aa8.81□□□□□ -1
TTC39B-203ENST00000380853 LMOD1P29536 600 aaPredicted RBP8.81□□□□□ -1
TTC39B-203ENST00000380853 GMPRP36959 345 aa8.81□□□□□ -1
TTC39B-203ENST00000380853 VEGFBP49765 207 aa8.81□□□□□ -1
TTC39B-203ENST00000380853 AIMP1Q12904 312 aaKnown RBP8.81□□□□□ -1
TTC39B-203ENST00000380853 HSP90AB3PQ58FF7 597 aa8.81□□□□□ -1
TTC39B-203ENST00000380853 SUSD4Q5VX71 490 aa8.81□□□□□ -1
TTC39B-203ENST00000380853 GIGYF2Q6Y7W6 1299 aaKnown RBP8.81□□□□□ -1
TTC39B-203ENST00000380853 TRIM46Q7Z4K8 759 aa8.81□□□□□ -1
TTC39B-203ENST00000380853 LDHDQ86WU2 507 aa8.81□□□□□ -1
TTC39B-203ENST00000380853 LARGE2Q8N3Y3 721 aa8.81□□□□□ -1
TTC39B-203ENST00000380853 SYMPKQ92797 1274 aaKnown RBP8.81□□□□□ -1
TTC39B-203ENST00000380853 RUNDC1Q96C34 613 aa8.81□□□□□ -1
TTC39B-203ENST00000380853 UTP14AQ9BVJ6 771 aaKnown RBP8.81□□□□□ -1
TTC39B-203ENST00000380853 BABAM1Q9NWV8 329 aa8.81□□□□□ -1
TTC39B-203ENST00000380853 NXF1Q9UBU9 619 aaKnown RBP8.81□□□□□ -1
TTC39B-203ENST00000380853 HACL1Q9UJ83 578 aa8.81□□□□□ -1
TTC39B-203ENST00000380853 NTSR2O95665 410 aa8.8□□□□□ -1
TTC39B-203ENST00000380853 LORP23490 312 aaPredicted RBP8.8□□□□□ -1
TTC39B-203ENST00000380853 CRY2Q49AN0 593 aa8.8□□□□□ -1
TTC39B-203ENST00000380853 NIM1KQ8IY84 436 aa8.8□□□□□ -1
TTC39B-203ENST00000380853 JMYQ8N9B5 988 aa8.8□□□□□ -1
TTC39B-203ENST00000380853 C7orf43Q8WVR3 580 aa8.8□□□□□ -1
TTC39B-203ENST00000380853 NLRP3Q96P20 1036 aa8.8□□□□□ -1
TTC39B-203ENST00000380853 TAF1DQ9H5J8 278 aaPredicted RBP8.8□□□□□ -1
TTC39B-203ENST00000380853 GJA3Q9Y6H8 435 aa8.8□□□□□ -1
TTC39B-203ENST00000380853 UTRNP46939 3433 aa8.8□□□□□ -1
TTC39B-203ENST00000380853 RNF123Q5XPI4 1314 aa8.8□□□□□ -1
TTC39B-203ENST00000380853 PPIP5K2O43314 1243 aa8.8□□□□□ -1
TTC39B-203ENST00000380853 JUNDP17535 347 aa8.8□□□□□ -1
TTC39B-203ENST00000380853 EPHX2P34913 555 aa8.8□□□□□ -1
TTC39B-203ENST00000380853 MDM2Q00987 491 aaPredicted RBP8.8□□□□□ -1
TTC39B-203ENST00000380853 PROSER3Q2NL68 480 aa8.8□□□□□ -1
TTC39B-203ENST00000380853 HDGFL1Q5TGJ6 251 aa8.8□□□□□ -1
TTC39B-203ENST00000380853 ZNF34Q8IZ26 560 aa8.8□□□□□ -1
TTC39B-203ENST00000380853 XAGE3Q8WTP9 111 aa8.8□□□□□ -1
TTC39B-203ENST00000380853 CRAMP1Q96RY5 1269 aa8.8□□□□□ -1
TTC39B-203ENST00000380853 PSMD1Q99460 953 aa8.8□□□□□ -1
TTC39B-203ENST00000380853 MKRN1Q9UHC7 482 aaKnown RBP8.8□□□□□ -1
TTC39B-203ENST00000380853 LAMB2P55268 1798 aa8.79□□□□□ -1
TTC39B-203ENST00000380853 SIAH2O43255 324 aa8.79□□□□□ -1
TTC39B-203ENST00000380853 HSPA1AP0DMV8 641 aaKnown RBP8.79□□□□□ -1
TTC39B-203ENST00000380853 HSPA1BP0DMV9 641 aaKnown RBP8.79□□□□□ -1
TTC39B-203ENST00000380853 HOXA10P31260 410 aaPredicted RBP8.79□□□□□ -1
TTC39B-203ENST00000380853 USP46P62068 366 aa8.79□□□□□ -1
TTC39B-203ENST00000380853 PTCRAQ6ISU1 281 aaPredicted RBP8.79□□□□□ -1
TTC39B-203ENST00000380853 COPS6Q7L5N1 327 aa8.79□□□□□ -1
TTC39B-203ENST00000380853 GPC2Q8N158 579 aa8.79□□□□□ -1
TTC39B-203ENST00000380853 EHBP1Q8NDI1 1231 aa8.79□□□□□ -1
TTC39B-203ENST00000380853 SUPT20HQ8NEM7 779 aa8.79□□□□□ -1
TTC39B-203ENST00000380853 DDX21Q9NR30 783 aaKnown RBP eCLIP8.79□□□□□ -1
TTC39B-203ENST00000380853 CHPF2Q9P2E5 772 aa8.79□□□□□ -1
TTC39B-203ENST00000380853 ABCC4O15439 1325 aa8.78□□□□□ -1
TTC39B-203ENST00000380853 SH3TC1Q8TE82 1336 aa8.78□□□□□ -1
TTC39B-203ENST00000380853 CAPN5O15484 640 aaPredicted RBP8.78□□□□□ -1
TTC39B-203ENST00000380853 KRT24Q2M2I5 525 aa8.78□□□□□ -1
TTC39B-203ENST00000380853 DDX46Q7L014 1031 aaKnown RBP8.78□□□□□ -1
TTC39B-203ENST00000380853 PNMA8AQ86V59 439 aaPredicted RBP8.78□□□□□ -1
TTC39B-203ENST00000380853 ZSCAN1Q8NBB4 408 aa8.78□□□□□ -1
TTC39B-203ENST00000380853 TRMT112Q9UI30 125 aaKnown RBP8.78□□□□□ -1
TTC39B-203ENST00000380853 FAM181BA6NEQ2 426 aa8.77□□□□□ -1.01
TTC39B-203ENST00000380853 FZD9O00144 591 aa8.77□□□□□ -1.01
TTC39B-203ENST00000380853 HOXB7P09629 217 aa8.77□□□□□ -1.01
TTC39B-203ENST00000380853 HCLS1P14317 486 aaPredicted RBP8.77□□□□□ -1.01
TTC39B-203ENST00000380853 CALD1Q05682 793 aaKnown RBP8.77□□□□□ -1.01
TTC39B-203ENST00000380853 MAP2K5Q13163 448 aa8.77□□□□□ -1.01
TTC39B-203ENST00000380853 AOC3Q16853 763 aa8.77□□□□□ -1.01
TTC39B-203ENST00000380853 DPP8Q6V1X1 898 aaPredicted RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms