RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 APPBP2Q92624 585 aa19.06■□□□□ 0.64
VPS16-203ENST00000380469 C8orf76Q96K31 380 aa19.06■□□□□ 0.64
VPS16-203ENST00000380469 PCDHA7Q9UN72 937 aa19.06■□□□□ 0.64
VPS16-203ENST00000380469 TRIM28Q13263 835 aaKnown RBP19.05■□□□□ 0.64
VPS16-203ENST00000380469 IFIT5Q13325 482 aaKnown RBP19.05■□□□□ 0.64
VPS16-203ENST00000380469 KIF6Q6ZMV9 814 aa19.05■□□□□ 0.64
VPS16-203ENST00000380469 RALYLQ86SE5 291 aaKnown RBP19.05■□□□□ 0.64
VPS16-203ENST00000380469 NCOA7Q8NI08 942 aa19.05■□□□□ 0.64
VPS16-203ENST00000380469 ARID3AQ99856 593 aa19.05■□□□□ 0.64
VPS16-203ENST00000380469 CCDC94Q9BW85 323 aaPredicted RBP19.05■□□□□ 0.64
VPS16-203ENST00000380469 KLF18A0A0U1RQI7 1052 aa19.05■□□□□ 0.64
VPS16-203ENST00000380469 NEMFO60524 1076 aa19.05■□□□□ 0.64
VPS16-203ENST00000380469 PCCAP05165 728 aaPredicted RBP19.05■□□□□ 0.64
VPS16-203ENST00000380469 STK38Q15208 465 aa19.05■□□□□ 0.64
VPS16-203ENST00000380469 CEP57L1Q8IYX8 460 aa19.05■□□□□ 0.64
VPS16-203ENST00000380469 CACTINQ8WUQ7 758 aaKnown RBP19.05■□□□□ 0.64
VPS16-203ENST00000380469 SDF4Q9BRK5 362 aa19.05■□□□□ 0.64
VPS16-203ENST00000380469 BCL2L12Q9HB09 334 aa19.05■□□□□ 0.64
VPS16-203ENST00000380469 GPHNQ9NQX3 736 aaPredicted RBP19.05■□□□□ 0.64
VPS16-203ENST00000380469 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.04■□□□□ 0.64
VPS16-203ENST00000380469 A0A1W2PQ27 194 aa19.04■□□□□ 0.64
VPS16-203ENST00000380469 A0A1W2PQ64 194 aa19.04■□□□□ 0.64
VPS16-203ENST00000380469 A0A1W2PQD8 194 aa19.04■□□□□ 0.64
VPS16-203ENST00000380469 ZNF213O14771 459 aa19.04■□□□□ 0.64
VPS16-203ENST00000380469 CPLX1O14810 134 aa19.04■□□□□ 0.64
VPS16-203ENST00000380469 ZAP70P43403 619 aa19.04■□□□□ 0.64
VPS16-203ENST00000380469 ABCC12Q96J65 1359 aa19.04■□□□□ 0.64
VPS16-203ENST00000380469 GOLGA8BA8MQT2 603 aa19.03■□□□□ 0.64
VPS16-203ENST00000380469 ZRSR1Q15695 479 aaKnown RBP19.03■□□□□ 0.64
VPS16-203ENST00000380469 CCDC144BQ3MJ40 725 aa19.03■□□□□ 0.64
VPS16-203ENST00000380469 CCDC144CPQ8IYA2 1237 aa19.03■□□□□ 0.64
VPS16-203ENST00000380469 KCNG4Q8TDN1 519 aa19.03■□□□□ 0.64
VPS16-203ENST00000380469 CCDC85AQ96PX6 553 aaPredicted RBP19.03■□□□□ 0.64
VPS16-203ENST00000380469 CARD10Q9BWT7 1032 aa19.03■□□□□ 0.64
VPS16-203ENST00000380469 PLA2G12BQ9BX93 195 aa19.03■□□□□ 0.64
VPS16-203ENST00000380469 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.03■□□□□ 0.645e-6■■■■□ 24.2
VPS16-203ENST00000380469 ZMYND15Q9H091 742 aa19.03■□□□□ 0.64
VPS16-203ENST00000380469 ORC3Q9UBD5 711 aaPredicted RBP19.03■□□□□ 0.64
VPS16-203ENST00000380469 PAPPAQ13219 1627 aa19.03■□□□□ 0.64
VPS16-203ENST00000380469 STRCP1A6NGW2 1772 aa19.03■□□□□ 0.64
VPS16-203ENST00000380469 FAM177BA6PVY3 158 aa19.03■□□□□ 0.64
VPS16-203ENST00000380469 FOXP2O15409 715 aa19.03■□□□□ 0.64
VPS16-203ENST00000380469 DHX40Q8IX18 779 aaKnown RBP19.03■□□□□ 0.64
VPS16-203ENST00000380469 MB21D2Q8IYB1 491 aaPredicted RBP19.03■□□□□ 0.64
VPS16-203ENST00000380469 FMR1NBQ8N0W7 255 aaPredicted RBP19.03■□□□□ 0.64
VPS16-203ENST00000380469 FAM89AQ96GI7 184 aa19.03■□□□□ 0.64
VPS16-203ENST00000380469 TNS2Q63HR2 1409 aa19.03■□□□□ 0.64
VPS16-203ENST00000380469 TPD52L1Q16890 204 aaPredicted RBP19.02■□□□□ 0.64
VPS16-203ENST00000380469 BRAPQ7Z569 592 aa19.02■□□□□ 0.64
VPS16-203ENST00000380469 ZBTB38Q8NAP3 1195 aaPredicted RBP19.02■□□□□ 0.64
VPS16-203ENST00000380469 LINC00301Q8NCQ3 95 aa19.02■□□□□ 0.64
VPS16-203ENST00000380469 FBXO18Q8NFZ0 1043 aa19.02■□□□□ 0.64
VPS16-203ENST00000380469 C16orf45Q96MC5 204 aaPredicted RBP19.02■□□□□ 0.64
VPS16-203ENST00000380469 TEX13AQ9BXU3 409 aaPredicted RBP19.02■□□□□ 0.64
VPS16-203ENST00000380469 PUS7LQ9H0K6 701 aaKnown RBP19.02■□□□□ 0.64
VPS16-203ENST00000380469 TMOD3Q9NYL9 352 aa19.02■□□□□ 0.64
VPS16-203ENST00000380469 CSF1RP07333 972 aa19.02■□□□□ 0.64
VPS16-203ENST00000380469 TNNT1P13805 278 aa19.02■□□□□ 0.64
VPS16-203ENST00000380469 SCARF1Q14162 830 aa19.02■□□□□ 0.64
VPS16-203ENST00000380469 SYNE3Q6ZMZ3 975 aa19.02■□□□□ 0.64
VPS16-203ENST00000380469 LRRC8AQ8IWT6 810 aa19.02■□□□□ 0.64
VPS16-203ENST00000380469 WDR19Q8NEZ3 1342 aa19.01■□□□□ 0.63
VPS16-203ENST00000380469 A0A1B0GVL5 298 aa19.01■□□□□ 0.63
VPS16-203ENST00000380469 GPAA1O43292 621 aa19.01■□□□□ 0.63
VPS16-203ENST00000380469 YEATS4O95619 227 aa19.01■□□□□ 0.63
VPS16-203ENST00000380469 POLR3DP05423 398 aaPredicted RBP19.01■□□□□ 0.63
VPS16-203ENST00000380469 OTUD7BQ6GQQ9 843 aa19.01■□□□□ 0.63
VPS16-203ENST00000380469 POLR3EQ9NVU0 708 aa19.01■□□□□ 0.63
VPS16-203ENST00000380469 CLIC4Q9Y696 253 aa19.01■□□□□ 0.63
VPS16-203ENST00000380469 SMTNL1A8MU46 457 aa19.01■□□□□ 0.63
VPS16-203ENST00000380469 TRDNQ13061 729 aa19.01■□□□□ 0.63
VPS16-203ENST00000380469 ATP2B3Q16720 1220 aa19.01■□□□□ 0.63
VPS16-203ENST00000380469 METTL24Q5JXM2 366 aa19.01■□□□□ 0.63
VPS16-203ENST00000380469 HPS5Q9UPZ3 1129 aa19.01■□□□□ 0.63
VPS16-203ENST00000380469 PAXBP1Q9Y5B6 917 aa19.01■□□□□ 0.63
VPS16-203ENST00000380469 COL5A2P05997 1499 aaPredicted RBP19■□□□□ 0.63
VPS16-203ENST00000380469 NWD2Q9ULI1 1742 aa19■□□□□ 0.63
VPS16-203ENST00000380469 SPTLC2O15270 562 aa19■□□□□ 0.63
VPS16-203ENST00000380469 CTIFO43310 598 aaKnown RBP19■□□□□ 0.63
VPS16-203ENST00000380469 NDUFA8P51970 172 aa19■□□□□ 0.63
VPS16-203ENST00000380469 HSP90AB3PQ58FF7 597 aa19■□□□□ 0.63
VPS16-203ENST00000380469 AOPEPQ8N6M6 819 aa19■□□□□ 0.63
VPS16-203ENST00000380469 BRINP3Q76B58 766 aa19■□□□□ 0.63
VPS16-203ENST00000380469 ANTXR2P58335 489 aa18.99■□□□□ 0.63
VPS16-203ENST00000380469 EVA1CP58658 441 aa18.99■□□□□ 0.63
VPS16-203ENST00000380469 MYSM1Q5VVJ2 828 aa18.99■□□□□ 0.63
VPS16-203ENST00000380469 A0A087WWV3 80 aa18.99■□□□□ 0.63
VPS16-203ENST00000380469 STARD3NLO95772 234 aa18.99■□□□□ 0.63
VPS16-203ENST00000380469 LDHAL6AQ6ZMR3 332 aa18.99■□□□□ 0.63
VPS16-203ENST00000380469 STRN4Q9NRL3 753 aa18.99■□□□□ 0.63
VPS16-203ENST00000380469 KIAA1468Q9P260 1216 aa18.99■□□□□ 0.63
VPS16-203ENST00000380469 RBM6P78332 1123 aaKnown RBP18.98■□□□□ 0.63
VPS16-203ENST00000380469 TTF1Q15361 905 aaPredicted RBP18.98■□□□□ 0.63
VPS16-203ENST00000380469 PI16Q6UXB8 463 aa18.98■□□□□ 0.63
VPS16-203ENST00000380469 PDCL2Q8N4E4 241 aa18.98■□□□□ 0.63
VPS16-203ENST00000380469 ERCC4Q92889 916 aaPredicted RBP18.98■□□□□ 0.63
VPS16-203ENST00000380469 FBXW7Q969H0 707 aa18.98■□□□□ 0.63
VPS16-203ENST00000380469 RIPOR2Q9Y4F9 1068 aa18.98■□□□□ 0.63
VPS16-203ENST00000380469 RAB11FIP4Q86YS3 637 aa18.97■□□□□ 0.63
VPS16-203ENST00000380469 DNAJC10Q8IXB1 793 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms