RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 IGHMBP2P38935 993 aaKnown RBP14.88□□□□□ -0.03
VPS16-202ENST00000380445 SCRN1Q12765 414 aa14.88□□□□□ -0.03
VPS16-202ENST00000380445 SLC9C2Q5TAH2 1124 aa14.88□□□□□ -0.03
VPS16-202ENST00000380445 IFFO2Q5TF58 517 aa14.88□□□□□ -0.03
VPS16-202ENST00000380445 LRRC2Q9BYS8 371 aa14.88□□□□□ -0.03
VPS16-202ENST00000380445 ZSCAN16Q9H4T2 348 aaPredicted RBP14.88□□□□□ -0.03
VPS16-202ENST00000380445 PI16Q6UXB8 463 aa14.87□□□□□ -0.03
VPS16-202ENST00000380445 ESPNB1AK53 854 aa14.87□□□□□ -0.03
VPS16-202ENST00000380445 ZNF213O14771 459 aa14.87□□□□□ -0.03
VPS16-202ENST00000380445 PDCL3Q9H2J4 239 aa14.87□□□□□ -0.03
VPS16-202ENST00000380445 AKAP11Q9UKA4 1901 aa14.87□□□□□ -0.03
VPS16-202ENST00000380445 ATRNO75882 1429 aa14.87□□□□□ -0.03
VPS16-202ENST00000380445 MCM5P33992 734 aa14.86□□□□□ -0.03
VPS16-202ENST00000380445 PHKA1P46020 1223 aa14.86□□□□□ -0.03
VPS16-202ENST00000380445 APOBRQ0VD83 1088 aa14.86□□□□□ -0.03
VPS16-202ENST00000380445 TTLL5Q6EMB2 1281 aa14.86□□□□□ -0.03
VPS16-202ENST00000380445 FERMT3Q86UX7 667 aa14.86□□□□□ -0.03
VPS16-202ENST00000380445 NCOA7Q8NI08 942 aa14.86□□□□□ -0.03
VPS16-202ENST00000380445 FAM177BA6PVY3 158 aa14.86□□□□□ -0.03
VPS16-202ENST00000380445 JAK2O60674 1132 aa14.86□□□□□ -0.03
VPS16-202ENST00000380445 IDH1O75874 414 aaKnown RBP14.86□□□□□ -0.03
VPS16-202ENST00000380445 NTSR2O95665 410 aa14.86□□□□□ -0.03
VPS16-202ENST00000380445 RALYLQ86SE5 291 aaKnown RBP14.86□□□□□ -0.03
VPS16-202ENST00000380445 ZNF831Q5JPB2 1677 aa14.86□□□□□ -0.03
VPS16-202ENST00000380445 WDR19Q8NEZ3 1342 aa14.86□□□□□ -0.03
VPS16-202ENST00000380445 RGL2O15211 777 aa14.85□□□□□ -0.03
VPS16-202ENST00000380445 DTNBO60941 627 aa14.85□□□□□ -0.03
VPS16-202ENST00000380445 EVCP57679 992 aa14.85□□□□□ -0.03
VPS16-202ENST00000380445 ARAP2Q8WZ64 1704 aa14.85□□□□□ -0.03
VPS16-202ENST00000380445 FOXP2O15409 715 aa14.85□□□□□ -0.03
VPS16-202ENST00000380445 TRDNQ13061 729 aa14.85□□□□□ -0.03
VPS16-202ENST00000380445 VPS72Q15906 364 aa14.85□□□□□ -0.03
VPS16-202ENST00000380445 NSUN7Q8NE18 718 aaKnown RBP14.85□□□□□ -0.03
VPS16-202ENST00000380445 DHX16O60231 1041 aaKnown RBP14.85□□□□□ -0.03
VPS16-202ENST00000380445 PDIA3P30101 505 aaKnown RBP14.85□□□□□ -0.03
VPS16-202ENST00000380445 MAP3K12Q12852 859 aa14.85□□□□□ -0.03
VPS16-202ENST00000380445 NAA16Q6N069 864 aaPredicted RBP14.85□□□□□ -0.03
VPS16-202ENST00000380445 SPATA5Q8NB90 893 aa14.85□□□□□ -0.03
VPS16-202ENST00000380445 HELBQ8NG08 1087 aaPredicted RBP14.85□□□□□ -0.03
VPS16-202ENST00000380445 CDC5LQ99459 802 aaKnown RBP14.85□□□□□ -0.03
VPS16-202ENST00000380445 A0A0G2JLW4 131 aa14.84□□□□□ -0.03
VPS16-202ENST00000380445 GOLGA6L4A6NEF3 574 aa14.84□□□□□ -0.03
VPS16-202ENST00000380445 FAM98CQ17RN3 349 aaKnown RBP14.84□□□□□ -0.03
VPS16-202ENST00000380445 SPATA32Q96LK8 384 aa14.84□□□□□ -0.03
VPS16-202ENST00000380445 PIH1D3Q9NQM4 214 aaKnown RBP14.84□□□□□ -0.03
VPS16-202ENST00000380445 CFAP45Q9UL16 551 aa14.84□□□□□ -0.03
VPS16-202ENST00000380445 MYH14Q7Z406 1995 aaKnown RBP14.84□□□□□ -0.03
VPS16-202ENST00000380445 KCNQ2O43526 872 aa14.84□□□□□ -0.03
VPS16-202ENST00000380445 HAND2P61296 217 aa14.84□□□□□ -0.03
VPS16-202ENST00000380445 TTC6Q86TZ1 520 aa14.84□□□□□ -0.03
VPS16-202ENST00000380445 DDX11Q96FC9 970 aa14.84□□□□□ -0.03
VPS16-202ENST00000380445 NGLY1Q96IV0 654 aa14.84□□□□□ -0.03
VPS16-202ENST00000380445 NAP1L2Q9ULW6 460 aaPredicted RBP14.84□□□□□ -0.03
VPS16-202ENST00000380445 ZNF532Q9HCE3 1301 aa14.83□□□□□ -0.03
VPS16-202ENST00000380445 LAMB2P55268 1798 aa14.83□□□□□ -0.04
VPS16-202ENST00000380445 PTPDC1A2A3K4 754 aa14.83□□□□□ -0.04
VPS16-202ENST00000380445 PDE6AP16499 860 aa14.83□□□□□ -0.04
VPS16-202ENST00000380445 UVSSAQ2YD98 709 aa14.83□□□□□ -0.04
VPS16-202ENST00000380445 HS1BP3Q53T59 392 aa14.83□□□□□ -0.04
VPS16-202ENST00000380445 SEC31BQ9NQW1 1179 aa14.83□□□□□ -0.04
VPS16-202ENST00000380445 COL5A3P25940 1745 aaPredicted RBP14.83□□□□□ -0.04
VPS16-202ENST00000380445 DDX60Q8IY21 1712 aaKnown RBP14.83□□□□□ -0.04
VPS16-202ENST00000380445 PRC1O43663 620 aa14.83□□□□□ -0.04
VPS16-202ENST00000380445 MB21D2Q8IYB1 491 aaPredicted RBP14.83□□□□□ -0.04
VPS16-202ENST00000380445 AIDAQ96BJ3 306 aa14.83□□□□□ -0.04
VPS16-202ENST00000380445 PDLIM2Q96JY6 352 aa14.83□□□□□ -0.04
VPS16-202ENST00000380445 APPP05067 770 aa14.82□□□□□ -0.04
VPS16-202ENST00000380445 CCT2P78371 535 aaKnown RBP14.82□□□□□ -0.04
VPS16-202ENST00000380445 RESTQ13127 1097 aa14.82□□□□□ -0.04
VPS16-202ENST00000380445 PRDM4Q9UKN5 801 aa14.82□□□□□ -0.04
VPS16-202ENST00000380445 ATL3Q6DD88 541 aa14.82□□□□□ -0.04
VPS16-202ENST00000380445 CHST3Q7LGC8 479 aa14.82□□□□□ -0.04
VPS16-202ENST00000380445 CNTNAP4Q9C0A0 1308 aa14.82□□□□□ -0.04
VPS16-202ENST00000380445 CTDNEP1O95476 244 aa14.81□□□□□ -0.04
VPS16-202ENST00000380445 ALX1Q15699 326 aa14.81□□□□□ -0.04
VPS16-202ENST00000380445 C8orf37Q96NL8 207 aa14.81□□□□□ -0.04
VPS16-202ENST00000380445 BCL11BQ9C0K0 894 aaPredicted RBP14.81□□□□□ -0.04
VPS16-202ENST00000380445 ZMYM6O95789 1325 aa14.81□□□□□ -0.04
VPS16-202ENST00000380445 SALL1Q9NSC2 1324 aa14.81□□□□□ -0.04
VPS16-202ENST00000380445 BCORQ6W2J9 1755 aa14.81□□□□□ -0.04
VPS16-202ENST00000380445 TCRBV5S4A2TA0A5A2 114 aa14.81□□□□□ -0.04
VPS16-202ENST00000380445 RASGRF1Q13972 1273 aa14.81□□□□□ -0.04
VPS16-202ENST00000380445 TPRNQ4KMQ1 711 aa14.81□□□□□ -0.04
VPS16-202ENST00000380445 RNF214Q8ND24 703 aa14.81□□□□□ -0.04
VPS16-202ENST00000380445 LEO1Q8WVC0 666 aaPredicted RBP14.81□□□□□ -0.04
VPS16-202ENST00000380445 TPM2P07951 284 aa14.8□□□□□ -0.04
VPS16-202ENST00000380445 FAM173BQ6P4H8 233 aa14.8□□□□□ -0.04
VPS16-202ENST00000380445 WWC3Q9ULE0 1092 aa14.8□□□□□ -0.04
VPS16-202ENST00000380445 CHRNDQ07001 517 aa14.8□□□□□ -0.04
VPS16-202ENST00000380445 SF3B3Q15393 1217 aaKnown RBP14.8□□□□□ -0.04
VPS16-202ENST00000380445 LINC00116Q8NCU8 138 aa14.8□□□□□ -0.04
VPS16-202ENST00000380445 STRBPQ96SI9 672 aaKnown RBP14.8□□□□□ -0.04
VPS16-202ENST00000380445 TFIP11Q9UBB9 837 aaKnown RBP14.8□□□□□ -0.04
VPS16-202ENST00000380445 BCL9LQ86UU0 1499 aa14.8□□□□□ -0.04
VPS16-202ENST00000380445 PATL2C9JE40 543 aaKnown RBP14.79□□□□□ -0.04
VPS16-202ENST00000380445 GNAT2P19087 354 aa14.79□□□□□ -0.04
VPS16-202ENST00000380445 RC3H1Q5TC82 1133 aaKnown RBP14.79□□□□□ -0.04
VPS16-202ENST00000380445 ZSCAN30Q86W11 494 aa14.79□□□□□ -0.04
VPS16-202ENST00000380445 ANKRD18AQ8IVF6 992 aa14.79□□□□□ -0.04
VPS16-202ENST00000380445 NCOA5Q9HCD5 579 aaKnown RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms