RNA–Protein interactions for RNA: ENST00000378676.1

SHROOM1-202, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-202ENST00000378676 C11orf57Q6ZUT1 292 aaPredicted RBP22.88■■□□□ 1.25
SHROOM1-202ENST00000378676 FBXO3Q9UK99 471 aa22.88■■□□□ 1.25
SHROOM1-202ENST00000378676 EVCP57679 992 aa22.87■■□□□ 1.25
SHROOM1-202ENST00000378676 KIF6Q6ZMV9 814 aa22.87■■□□□ 1.25
SHROOM1-202ENST00000378676 NRBP1Q9UHY1 535 aa22.87■■□□□ 1.25
SHROOM1-202ENST00000378676 KAT6BQ8WYB5 2073 aa22.87■■□□□ 1.25
SHROOM1-202ENST00000378676 LRP6O75581 1613 aa22.87■■□□□ 1.25
SHROOM1-202ENST00000378676 FGAP02671 866 aa22.87■■□□□ 1.25
SHROOM1-202ENST00000378676 SNW1Q13573 536 aaKnown RBP22.87■■□□□ 1.25
SHROOM1-202ENST00000378676 MB21D2Q8IYB1 491 aaPredicted RBP22.87■■□□□ 1.25
SHROOM1-202ENST00000378676 FBXL16Q8N461 479 aa22.87■■□□□ 1.25
SHROOM1-202ENST00000378676 PRIMPOLQ96LW4 560 aa22.87■■□□□ 1.25
SHROOM1-202ENST00000378676 ZFYP08048 801 aaPredicted RBP22.86■■□□□ 1.25
SHROOM1-202ENST00000378676 IFIT5Q13325 482 aaKnown RBP22.86■■□□□ 1.25
SHROOM1-202ENST00000378676 IMMTQ16891 758 aaKnown RBP22.86■■□□□ 1.25
SHROOM1-202ENST00000378676 OTUD7BQ6GQQ9 843 aa22.86■■□□□ 1.25
SHROOM1-202ENST00000378676 ZBTB38Q8NAP3 1195 aaPredicted RBP22.86■■□□□ 1.25
SHROOM1-202ENST00000378676 PIGBQ92521 554 aa22.86■■□□□ 1.25
SHROOM1-202ENST00000378676 APPBP2Q92624 585 aa22.86■■□□□ 1.25
SHROOM1-202ENST00000378676 ZNF396Q96N95 335 aaPredicted RBP22.86■■□□□ 1.25
SHROOM1-202ENST00000378676 TRIM5Q9C035 493 aa22.86■■□□□ 1.25
SHROOM1-202ENST00000378676 NHSL1Q5SYE7 1610 aa22.86■■□□□ 1.25
SHROOM1-202ENST00000378676 ANTXR2P58335 489 aa22.86■■□□□ 1.25
SHROOM1-202ENST00000378676 CCDC186Q7Z3E2 898 aa22.86■■□□□ 1.25
SHROOM1-202ENST00000378676 RAB11FIP4Q86YS3 637 aa22.86■■□□□ 1.25
SHROOM1-202ENST00000378676 CTNNA3Q9UI47 895 aa22.86■■□□□ 1.25
SHROOM1-202ENST00000378676 A0A087WWV3 80 aa22.85■■□□□ 1.25
SHROOM1-202ENST00000378676 PRC1O43663 620 aa22.85■■□□□ 1.25
SHROOM1-202ENST00000378676 IQCB1Q15051 598 aa22.85■■□□□ 1.25
SHROOM1-202ENST00000378676 HLFQ16534 295 aa22.85■■□□□ 1.25
SHROOM1-202ENST00000378676 ENGASEQ8NFI3 743 aa22.85■■□□□ 1.25
SHROOM1-202ENST00000378676 GPTP24298 496 aa22.85■■□□□ 1.25
SHROOM1-202ENST00000378676 EVA1CP58658 441 aa22.85■■□□□ 1.25
SHROOM1-202ENST00000378676 LRMPQ12912 555 aa22.85■■□□□ 1.25
SHROOM1-202ENST00000378676 ATP2B3Q16720 1220 aa22.85■■□□□ 1.25
SHROOM1-202ENST00000378676 LRRFIP1Q32MZ4 808 aaKnown RBP22.85■■□□□ 1.25
SHROOM1-202ENST00000378676 TSC1Q92574 1164 aa22.85■■□□□ 1.25
SHROOM1-202ENST00000378676 HPS5Q9UPZ3 1129 aa22.85■■□□□ 1.25
SHROOM1-202ENST00000378676 ABCC12Q96J65 1359 aa22.84■■□□□ 1.25
SHROOM1-202ENST00000378676 MAP3K15Q6ZN16 1313 aa22.84■■□□□ 1.25
SHROOM1-202ENST00000378676 MCAMP43121 646 aa22.84■■□□□ 1.25
SHROOM1-202ENST00000378676 CCDC73Q6ZRK6 1079 aa22.84■■□□□ 1.25
SHROOM1-202ENST00000378676 KLF18A0A0U1RQI7 1052 aa22.84■■□□□ 1.25
SHROOM1-202ENST00000378676 GPAA1O43292 621 aa22.84■■□□□ 1.25
SHROOM1-202ENST00000378676 FSIP1Q8NA03 581 aa22.84■■□□□ 1.25
SHROOM1-202ENST00000378676 GREM2Q9H772 168 aa22.84■■□□□ 1.25
SHROOM1-202ENST00000378676 CHD4Q14839 1912 aa22.83■■□□□ 1.25
SHROOM1-202ENST00000378676 GOLGA8BA8MQT2 603 aa22.83■■□□□ 1.25
SHROOM1-202ENST00000378676 ME1P48163 572 aa22.83■■□□□ 1.25
SHROOM1-202ENST00000378676 METTL24Q5JXM2 366 aa22.83■■□□□ 1.25
SHROOM1-202ENST00000378676 ATL3Q6DD88 541 aa22.83■■□□□ 1.25
SHROOM1-202ENST00000378676 GIGYF2Q6Y7W6 1299 aaKnown RBP22.83■■□□□ 1.25
SHROOM1-202ENST00000378676 DRC7Q8IY82 874 aa22.83■■□□□ 1.25
SHROOM1-202ENST00000378676 RIPOR2Q9Y4F9 1068 aa22.83■■□□□ 1.25
SHROOM1-202ENST00000378676 FAM160A1Q05DH4 1040 aa22.83■■□□□ 1.24
SHROOM1-202ENST00000378676 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.83■■□□□ 1.24
SHROOM1-202ENST00000378676 ARAP2Q8WZ64 1704 aa22.82■■□□□ 1.24
SHROOM1-202ENST00000378676 CDHR2Q9BYE9 1310 aa22.82■■□□□ 1.24
SHROOM1-202ENST00000378676 STX1AQ16623 288 aa22.82■■□□□ 1.24
SHROOM1-202ENST00000378676 NBPF3Q9H094 633 aa22.82■■□□□ 1.24
SHROOM1-202ENST00000378676 LTBP4Q8N2S1 1624 aa22.82■■□□□ 1.24
SHROOM1-202ENST00000378676 CTAGE5O15320 804 aa22.82■■□□□ 1.24
SHROOM1-202ENST00000378676 ITGA6P23229 1130 aa22.82■■□□□ 1.24
SHROOM1-202ENST00000378676 NLRP10Q86W26 655 aa22.82■■□□□ 1.24
SHROOM1-202ENST00000378676 TTLL11Q8NHH1 800 aa22.82■■□□□ 1.24
SHROOM1-202ENST00000378676 NKX2-3Q8TAU0 364 aa22.82■■□□□ 1.24
SHROOM1-202ENST00000378676 GJB4Q9NTQ9 266 aa22.82■■□□□ 1.24
SHROOM1-202ENST00000378676 DENND2AQ9ULE3 1009 aa22.82■■□□□ 1.24
SHROOM1-202ENST00000378676 PCDHA7Q9UN72 937 aa22.82■■□□□ 1.24
SHROOM1-202ENST00000378676 ERCC4Q92889 916 aaPredicted RBP22.81■■□□□ 1.24
SHROOM1-202ENST00000378676 KINO60870 393 aaKnown RBP22.81■■□□□ 1.24
SHROOM1-202ENST00000378676 GTF2F1P35269 517 aaKnown RBP eCLIP22.81■■□□□ 1.24
SHROOM1-202ENST00000378676 CCDC144BQ3MJ40 725 aa22.81■■□□□ 1.24
SHROOM1-202ENST00000378676 CCDC144CPQ8IYA2 1237 aa22.81■■□□□ 1.24
SHROOM1-202ENST00000378676 NCOA7Q8NI08 942 aa22.81■■□□□ 1.24
SHROOM1-202ENST00000378676 ATRNO75882 1429 aa22.8■■□□□ 1.24
SHROOM1-202ENST00000378676 CAVIN2O95810 425 aa22.8■■□□□ 1.24
SHROOM1-202ENST00000378676 ZSCAN25Q6NSZ9 544 aa22.8■■□□□ 1.24
SHROOM1-202ENST00000378676 LDHAL6AQ6ZMR3 332 aa22.8■■□□□ 1.24
SHROOM1-202ENST00000378676 TEX13AQ9BXU3 409 aaPredicted RBP22.8■■□□□ 1.24
SHROOM1-202ENST00000378676 RTEL1Q9NZ71 1219 aa22.8■■□□□ 1.24
SHROOM1-202ENST00000378676 C8orf76Q96K31 380 aa22.79■■□□□ 1.24
SHROOM1-202ENST00000378676 SLC4A9Q96Q91 983 aa22.79■■□□□ 1.24
SHROOM1-202ENST00000378676 MAP7D2Q96T17 732 aa22.79■■□□□ 1.24
SHROOM1-202ENST00000378676 CLIP2Q9UDT6 1046 aa22.79■■□□□ 1.24
SHROOM1-202ENST00000378676 CLIC4Q9Y696 253 aa22.79■■□□□ 1.24
SHROOM1-202ENST00000378676 ZNF213O14771 459 aa22.79■■□□□ 1.24
SHROOM1-202ENST00000378676 STARD3NLO95772 234 aa22.79■■□□□ 1.24
SHROOM1-202ENST00000378676 ADD2P35612 726 aa22.79■■□□□ 1.24
SHROOM1-202ENST00000378676 CTSWP56202 376 aa22.79■■□□□ 1.24
SHROOM1-202ENST00000378676 RALYLQ86SE5 291 aaKnown RBP22.79■■□□□ 1.24
SHROOM1-202ENST00000378676 VGLL2Q8N8G2 317 aa22.79■■□□□ 1.24
SHROOM1-202ENST00000378676 ORC3Q9UBD5 711 aaPredicted RBP22.79■■□□□ 1.24
SHROOM1-202ENST00000378676 LRP5O75197 1615 aa22.79■■□□□ 1.24
SHROOM1-202ENST00000378676 FAM177BA6PVY3 158 aa22.78■■□□□ 1.24
SHROOM1-202ENST00000378676 FMR1NBQ8N0W7 255 aaPredicted RBP22.78■■□□□ 1.24
SHROOM1-202ENST00000378676 MRPS27Q92552 414 aaKnown RBP22.78■■□□□ 1.24
SHROOM1-202ENST00000378676 CHMP4CQ96CF2 233 aa22.78■■□□□ 1.24
SHROOM1-202ENST00000378676 PIH1D3Q9NQM4 214 aaKnown RBP22.78■■□□□ 1.24
SHROOM1-202ENST00000378676 DOCK2Q92608 1830 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms