RNA–Protein interactions for RNA: ENST00000377507.7

TNFRSF9-201, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF9, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-201ENST00000377507 DDX60Q8IY21 1712 aaKnown RBP13.77□□□□□ -0.21
TNFRSF9-201ENST00000377507 DHX16O60231 1041 aaKnown RBP13.76□□□□□ -0.21
TNFRSF9-201ENST00000377507 FAM160A1Q05DH4 1040 aa13.76□□□□□ -0.21
TNFRSF9-201ENST00000377507 WASHC4Q2M389 1173 aa13.76□□□□□ -0.21
TNFRSF9-201ENST00000377507 HSP90AB3PQ58FF7 597 aa13.76□□□□□ -0.21
TNFRSF9-201ENST00000377507 SARM1Q6SZW1 724 aa13.76□□□□□ -0.21
TNFRSF9-201ENST00000377507 C17orf53Q8N3J3 647 aaPredicted RBP13.76□□□□□ -0.21
TNFRSF9-201ENST00000377507 VGLL2Q8N8G2 317 aa13.76□□□□□ -0.21
TNFRSF9-201ENST00000377507 FTOQ9C0B1 505 aaKnown RBP eCLIP13.76□□□□□ -0.21
TNFRSF9-201ENST00000377507 DNAJC25Q9H1X3 360 aa13.76□□□□□ -0.21
TNFRSF9-201ENST00000377507 CDC25BP30305 580 aa13.76□□□□□ -0.21
TNFRSF9-201ENST00000377507 ANTXR2P58335 489 aa13.76□□□□□ -0.21
TNFRSF9-201ENST00000377507 ATP2B3Q16720 1220 aa13.76□□□□□ -0.21
TNFRSF9-201ENST00000377507 SPC24Q8NBT2 197 aa13.76□□□□□ -0.21
TNFRSF9-201ENST00000377507 NCOA7Q8NI08 942 aa13.76□□□□□ -0.21
TNFRSF9-201ENST00000377507 GPHNQ9NQX3 736 aaPredicted RBP13.76□□□□□ -0.21
TNFRSF9-201ENST00000377507 ATRNO75882 1429 aa13.75□□□□□ -0.21
TNFRSF9-201ENST00000377507 A0A1W2PQ27 194 aa13.75□□□□□ -0.21
TNFRSF9-201ENST00000377507 A0A1W2PQ64 194 aa13.75□□□□□ -0.21
TNFRSF9-201ENST00000377507 A0A1W2PQD8 194 aa13.75□□□□□ -0.21
TNFRSF9-201ENST00000377507 GPAA1O43292 621 aa13.75□□□□□ -0.21
TNFRSF9-201ENST00000377507 PRC1O43663 620 aa13.75□□□□□ -0.21
TNFRSF9-201ENST00000377507 ADD2P35612 726 aa13.75□□□□□ -0.21
TNFRSF9-201ENST00000377507 MCAMP43121 646 aa13.75□□□□□ -0.21
TNFRSF9-201ENST00000377507 CEBPZQ03701 1054 aaKnown RBP13.75□□□□□ -0.21
TNFRSF9-201ENST00000377507 HLFQ16534 295 aa13.75□□□□□ -0.21
TNFRSF9-201ENST00000377507 TAF7LQ5H9L4 462 aa13.75□□□□□ -0.21
TNFRSF9-201ENST00000377507 DNTTIP2Q5QJE6 756 aaKnown RBP13.75□□□□□ -0.21
TNFRSF9-201ENST00000377507 ADALQ6DHV7 355 aa13.75□□□□□ -0.21
TNFRSF9-201ENST00000377507 FBXO18Q8NFZ0 1043 aa13.75□□□□□ -0.21
TNFRSF9-201ENST00000377507 AKAP11Q9UKA4 1901 aa13.74□□□□□ -0.21
TNFRSF9-201ENST00000377507 ZNF213O14771 459 aa13.74□□□□□ -0.21
TNFRSF9-201ENST00000377507 PTGS1P23219 599 aa13.74□□□□□ -0.21
TNFRSF9-201ENST00000377507 ITGA6P23229 1130 aa13.74□□□□□ -0.21
TNFRSF9-201ENST00000377507 CTSWP56202 376 aa13.74□□□□□ -0.21
TNFRSF9-201ENST00000377507 STX1AQ16623 288 aa13.74□□□□□ -0.21
TNFRSF9-201ENST00000377507 ZSCAN25Q6NSZ9 544 aa13.74□□□□□ -0.21
TNFRSF9-201ENST00000377507 LDHAL6AQ6ZMR3 332 aa13.74□□□□□ -0.21
TNFRSF9-201ENST00000377507 CCDC73Q6ZRK6 1079 aa13.74□□□□□ -0.21
TNFRSF9-201ENST00000377507 MTERF4Q7Z6M4 381 aaKnown RBP13.74□□□□□ -0.21
TNFRSF9-201ENST00000377507 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.74□□□□□ -0.21
TNFRSF9-201ENST00000377507 GREM2Q9H772 168 aa13.74□□□□□ -0.21
TNFRSF9-201ENST00000377507 DISP2A7MBM2 1401 aa13.74□□□□□ -0.21
TNFRSF9-201ENST00000377507 BCL9O00512 1426 aa13.74□□□□□ -0.21
TNFRSF9-201ENST00000377507 CYP19A1P11511 503 aaPredicted RBP13.74□□□□□ -0.21
TNFRSF9-201ENST00000377507 HAND2P61296 217 aa13.74□□□□□ -0.21
TNFRSF9-201ENST00000377507 TTF1Q15361 905 aaPredicted RBP13.74□□□□□ -0.21
TNFRSF9-201ENST00000377507 UBE3CQ15386 1083 aa13.74□□□□□ -0.21
TNFRSF9-201ENST00000377507 METTL24Q5JXM2 366 aa13.74□□□□□ -0.21
TNFRSF9-201ENST00000377507 PI16Q6UXB8 463 aa13.74□□□□□ -0.21
TNFRSF9-201ENST00000377507 CCDC186Q7Z3E2 898 aa13.74□□□□□ -0.21
TNFRSF9-201ENST00000377507 FMR1NBQ8N0W7 255 aaPredicted RBP13.74□□□□□ -0.21
TNFRSF9-201ENST00000377507 SYNE4Q8N205 404 aa13.74□□□□□ -0.21
TNFRSF9-201ENST00000377507 LINC00301Q8NCQ3 95 aa13.74□□□□□ -0.21
TNFRSF9-201ENST00000377507 CCDC85AQ96PX6 553 aaPredicted RBP13.74□□□□□ -0.21
TNFRSF9-201ENST00000377507 TRIM5Q9C035 493 aa13.74□□□□□ -0.21
TNFRSF9-201ENST00000377507 POLR3EQ9NVU0 708 aa13.74□□□□□ -0.21
TNFRSF9-201ENST00000377507 PCDHA7Q9UN72 937 aa13.74□□□□□ -0.21
TNFRSF9-201ENST00000377507 ZNF330Q9Y3S2 320 aaPredicted RBP13.74□□□□□ -0.21
TNFRSF9-201ENST00000377507 LRP6O75581 1613 aa13.74□□□□□ -0.21
TNFRSF9-201ENST00000377507 KLF18A0A0U1RQI7 1052 aa13.73□□□□□ -0.21
TNFRSF9-201ENST00000377507 ANKRD18BA2A2Z9 1011 aa13.73□□□□□ -0.21
TNFRSF9-201ENST00000377507 KINO60870 393 aaKnown RBP13.73□□□□□ -0.21
TNFRSF9-201ENST00000377507 PDE8BO95263 885 aa13.73□□□□□ -0.21
TNFRSF9-201ENST00000377507 SLC4A9Q96Q91 983 aa13.73□□□□□ -0.21
TNFRSF9-201ENST00000377507 NBPF3Q9H094 633 aa13.73□□□□□ -0.21
TNFRSF9-201ENST00000377507 MYH7P12883 1935 aa13.73□□□□□ -0.21
TNFRSF9-201ENST00000377507 ERVV-1B6SEH8 477 aa13.72□□□□□ -0.21
TNFRSF9-201ENST00000377507 YEATS4O95619 227 aa13.72□□□□□ -0.21
TNFRSF9-201ENST00000377507 ME1P48163 572 aa13.72□□□□□ -0.21
TNFRSF9-201ENST00000377507 FOSBP53539 338 aa13.72□□□□□ -0.21
TNFRSF9-201ENST00000377507 RBM10P98175 930 aaKnown RBP13.72□□□□□ -0.21
TNFRSF9-201ENST00000377507 GUCY1B3Q02153 619 aa13.72□□□□□ -0.21
TNFRSF9-201ENST00000377507 C11orf57Q6ZUT1 292 aaPredicted RBP13.72□□□□□ -0.21
TNFRSF9-201ENST00000377507 BRAPQ7Z569 592 aa13.72□□□□□ -0.21
TNFRSF9-201ENST00000377507 MRFAP1L1Q96HT8 127 aa13.72□□□□□ -0.21
TNFRSF9-201ENST00000377507 C8orf76Q96K31 380 aa13.72□□□□□ -0.21
TNFRSF9-201ENST00000377507 FAM13BQ9NYF5 915 aa13.72□□□□□ -0.21
TNFRSF9-201ENST00000377507 NAP1L2Q9ULW6 460 aaPredicted RBP13.72□□□□□ -0.21
TNFRSF9-201ENST00000377507 ITGB4P16144 1822 aa13.72□□□□□ -0.21
TNFRSF9-201ENST00000377507 NHSL1Q5SYE7 1610 aa13.72□□□□□ -0.21
TNFRSF9-201ENST00000377507 IRS4O14654 1257 aaPredicted RBP13.72□□□□□ -0.21
TNFRSF9-201ENST00000377507 ARID4AP29374 1257 aaPredicted RBP13.72□□□□□ -0.21
TNFRSF9-201ENST00000377507 RALYLQ86SE5 291 aaKnown RBP13.72□□□□□ -0.21
TNFRSF9-201ENST00000377507 FSIP1Q8NA03 581 aa13.72□□□□□ -0.21
TNFRSF9-201ENST00000377507 KCNG4Q8TDN1 519 aa13.72□□□□□ -0.21
TNFRSF9-201ENST00000377507 MRPS27Q92552 414 aaKnown RBP13.72□□□□□ -0.21
TNFRSF9-201ENST00000377507 ANO10Q9NW15 660 aa13.72□□□□□ -0.21
TNFRSF9-201ENST00000377507 STRCQ7RTU9 1775 aa13.72□□□□□ -0.21
TNFRSF9-201ENST00000377507 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.71□□□□□ -0.21
TNFRSF9-201ENST00000377507 ANKRD36CQ5JPF3 1778 aa13.71□□□□□ -0.21
TNFRSF9-201ENST00000377507 GOLGA8BA8MQT2 603 aa13.71□□□□□ -0.21
TNFRSF9-201ENST00000377507 PDE8AO60658 829 aa13.71□□□□□ -0.21
TNFRSF9-201ENST00000377507 SLC9C2Q5TAH2 1124 aa13.71□□□□□ -0.21
TNFRSF9-201ENST00000377507 DHX40Q8IX18 779 aaKnown RBP13.71□□□□□ -0.21
TNFRSF9-201ENST00000377507 ORC3Q9UBD5 711 aaPredicted RBP13.71□□□□□ -0.21
TNFRSF9-201ENST00000377507 NRBP1Q9UHY1 535 aa13.71□□□□□ -0.21
TNFRSF9-201ENST00000377507 LRP5O75197 1615 aa13.7□□□□□ -0.22
TNFRSF9-201ENST00000377507 TCRBV5S4A2TA0A5A2 114 aa13.7□□□□□ -0.22
TNFRSF9-201ENST00000377507 PPFIA3O75145 1194 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms