RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 CHST3Q7LGC8 479 aa20.45■□□□□ 0.86
CLSTN1-202ENST00000377298 WWC3Q9ULE0 1092 aa20.45■□□□□ 0.86
CLSTN1-202ENST00000377298 RTL1A6NKG5 1358 aa20.45■□□□□ 0.86
CLSTN1-202ENST00000377298 TCIRG1Q13488 830 aa20.45■□□□□ 0.86
CLSTN1-202ENST00000377298 IL17REQ8NFR9 667 aa20.45■□□□□ 0.86
CLSTN1-202ENST00000377298 MROH5Q6ZUA9 1318 aa20.45■□□□□ 0.86
CLSTN1-202ENST00000377298 SPDYE3A6NKU9 549 aa20.44■□□□□ 0.86
CLSTN1-202ENST00000377298 SEPT7Q16181 437 aaKnown RBP20.44■□□□□ 0.86
CLSTN1-202ENST00000377298 RBM26Q5T8P6 1007 aaKnown RBP20.44■□□□□ 0.86
CLSTN1-202ENST00000377298 KIF18AQ8NI77 898 aa20.44■□□□□ 0.86
CLSTN1-202ENST00000377298 KLHDC4Q8TBB5 520 aa20.44■□□□□ 0.86
CLSTN1-202ENST00000377298 TRIM47Q96LD4 638 aa20.44■□□□□ 0.86
CLSTN1-202ENST00000377298 JAG2Q9Y219 1238 aa20.44■□□□□ 0.86
CLSTN1-202ENST00000377298 SPATA31E1Q6ZUB1 1445 aa20.44■□□□□ 0.86
CLSTN1-202ENST00000377298 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.44■□□□□ 0.865e-7■■□□□ 12.1
CLSTN1-202ENST00000377298 ERBB4Q15303 1308 aa20.44■□□□□ 0.86
CLSTN1-202ENST00000377298 PTPDC1A2A3K4 754 aa20.44■□□□□ 0.86
CLSTN1-202ENST00000377298 ZNF594Q96JF6 807 aaPredicted RBP20.44■□□□□ 0.86
CLSTN1-202ENST00000377298 KRT2P35908 639 aa20.44■□□□□ 0.86
CLSTN1-202ENST00000377298 CWC15Q9P013 229 aaKnown RBP20.44■□□□□ 0.86
CLSTN1-202ENST00000377298 SPTLC2O15270 562 aa20.43■□□□□ 0.86
CLSTN1-202ENST00000377298 BRAPQ7Z569 592 aa20.43■□□□□ 0.86
CLSTN1-202ENST00000377298 SH2D4AQ9H788 454 aa20.43■□□□□ 0.86
CLSTN1-202ENST00000377298 CCDC66A2RUB6 948 aa20.43■□□□□ 0.86
CLSTN1-202ENST00000377298 TMC6Q7Z403 805 aa20.43■□□□□ 0.86
CLSTN1-202ENST00000377298 KIF4BQ2VIQ3 1234 aa20.43■□□□□ 0.86
CLSTN1-202ENST00000377298 USP48Q86UV5 1035 aa20.43■□□□□ 0.86
CLSTN1-202ENST00000377298 TMEM87BQ96K49 555 aa20.43■□□□□ 0.86
CLSTN1-202ENST00000377298 ENOX2Q16206 610 aaKnown RBP20.42■□□□□ 0.86
CLSTN1-202ENST00000377298 GBP3Q9H0R5 595 aa20.42■□□□□ 0.86
CLSTN1-202ENST00000377298 ATP7BP35670 1465 aa20.42■□□□□ 0.86
CLSTN1-202ENST00000377298 H0YIN7 160 aa20.42■□□□□ 0.86
CLSTN1-202ENST00000377298 SPAG1Q07617 926 aa20.42■□□□□ 0.86
CLSTN1-202ENST00000377298 RRAGBQ5VZM2 374 aa20.42■□□□□ 0.86
CLSTN1-202ENST00000377298 KBTBD3Q8NAB2 608 aa20.42■□□□□ 0.86
CLSTN1-202ENST00000377298 HECW2Q9P2P5 1572 aa20.42■□□□□ 0.86
CLSTN1-202ENST00000377298 PREX2Q70Z35 1606 aa20.42■□□□□ 0.86
CLSTN1-202ENST00000377298 NEURL1BA8MQ27 555 aa20.42■□□□□ 0.86
CLSTN1-202ENST00000377298 ISM2Q6H9L7 571 aa20.42■□□□□ 0.86
CLSTN1-202ENST00000377298 ZCCHC11Q5TAX3 1644 aaKnown RBP20.42■□□□□ 0.86
CLSTN1-202ENST00000377298 DNM1Q05193 864 aaKnown RBP20.41■□□□□ 0.86
CLSTN1-202ENST00000377298 PNMA6EA0A0J9YXQ4 647 aa20.41■□□□□ 0.86
CLSTN1-202ENST00000377298 LMOD1P29536 600 aaPredicted RBP20.41■□□□□ 0.86
CLSTN1-202ENST00000377298 AFMP43652 599 aa20.41■□□□□ 0.86
CLSTN1-202ENST00000377298 GIMAP6Q6P9H5 292 aa20.41■□□□□ 0.86
CLSTN1-202ENST00000377298 ERVK-7P63135 1459 aa20.41■□□□□ 0.86
CLSTN1-202ENST00000377298 N4BP3O15049 544 aa20.41■□□□□ 0.86
CLSTN1-202ENST00000377298 MARCKSP29966 332 aaPredicted RBP20.41■□□□□ 0.86
CLSTN1-202ENST00000377298 ZSCAN23Q3MJ62 389 aa20.41■□□□□ 0.86
CLSTN1-202ENST00000377298 USP37Q86T82 979 aa20.41■□□□□ 0.86
CLSTN1-202ENST00000377298 CCDC174Q6PII3 467 aa20.41■□□□□ 0.86
CLSTN1-202ENST00000377298 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.41■□□□□ 0.86
CLSTN1-202ENST00000377298 ADCY5O95622 1261 aa20.4■□□□□ 0.86
CLSTN1-202ENST00000377298 LRSAM1Q6UWE0 723 aa20.4■□□□□ 0.86
CLSTN1-202ENST00000377298 DPP8Q6V1X1 898 aaPredicted RBP20.4■□□□□ 0.86
CLSTN1-202ENST00000377298 SPDYE4A6NLX3 237 aa20.4■□□□□ 0.86
CLSTN1-202ENST00000377298 PARP1P09874 1014 aaKnown RBP20.4■□□□□ 0.86
CLSTN1-202ENST00000377298 KRT79Q5XKE5 535 aa20.4■□□□□ 0.86
CLSTN1-202ENST00000377298 CASQ1P31415 396 aa20.4■□□□□ 0.86
CLSTN1-202ENST00000377298 SUPT20HQ8NEM7 779 aa20.4■□□□□ 0.86
CLSTN1-202ENST00000377298 OTUD7AQ8TE49 926 aaPredicted RBP20.4■□□□□ 0.86
CLSTN1-202ENST00000377298 CTAGE1Q96RT6 745 aa20.4■□□□□ 0.86
CLSTN1-202ENST00000377298 GTPBP4Q9BZE4 634 aaKnown RBP20.4■□□□□ 0.86
CLSTN1-202ENST00000377298 PAFAH1B1P43034 410 aa20.39■□□□□ 0.86
CLSTN1-202ENST00000377298 LEKR1Q6ZMV7 388 aa20.39■□□□□ 0.86
CLSTN1-202ENST00000377298 BICD1Q96G01 975 aa20.39■□□□□ 0.86
CLSTN1-202ENST00000377298 DACT1Q9NYF0 836 aa20.39■□□□□ 0.86
CLSTN1-202ENST00000377298 GOLGA6L9A6NEM1 432 aa20.39■□□□□ 0.85
CLSTN1-202ENST00000377298 PSMA7O14818 248 aa20.39■□□□□ 0.85
CLSTN1-202ENST00000377298 ARHGEF25Q86VW2 580 aa20.39■□□□□ 0.85
CLSTN1-202ENST00000377298 GPAA1O43292 621 aa20.39■□□□□ 0.85
CLSTN1-202ENST00000377298 RPS6KB1P23443 525 aa20.39■□□□□ 0.85
CLSTN1-202ENST00000377298 ARMT1Q9H993 441 aa20.39■□□□□ 0.85
CLSTN1-202ENST00000377298 ATL3Q6DD88 541 aa20.39■□□□□ 0.85
CLSTN1-202ENST00000377298 NAP1L4Q99733 375 aaKnown RBP20.38■□□□□ 0.85
CLSTN1-202ENST00000377298 URI1O94763 535 aaPredicted RBP20.38■□□□□ 0.85
CLSTN1-202ENST00000377298 APBA3O96018 575 aa20.38■□□□□ 0.85
CLSTN1-202ENST00000377298 TAF5LO75529 589 aa20.38■□□□□ 0.85
CLSTN1-202ENST00000377298 ASIC1P78348 528 aa20.38■□□□□ 0.85
CLSTN1-202ENST00000377298 SGSM2O43147 1006 aa20.38■□□□□ 0.85
CLSTN1-202ENST00000377298 CCDC172P0C7W6 258 aa20.38■□□□□ 0.85
CLSTN1-202ENST00000377298 USP8P40818 1118 aa20.38■□□□□ 0.85
CLSTN1-202ENST00000377298 CARD10Q9BWT7 1032 aa20.38■□□□□ 0.85
CLSTN1-202ENST00000377298 CHD1O14646 1710 aa20.37■□□□□ 0.85
CLSTN1-202ENST00000377298 KDRP35968 1356 aa20.37■□□□□ 0.85
CLSTN1-202ENST00000377298 SLC27A2O14975 620 aa20.37■□□□□ 0.85
CLSTN1-202ENST00000377298 ALS2CR12Q96Q35 445 aa20.37■□□□□ 0.85
CLSTN1-202ENST00000377298 CENPHQ9H3R5 247 aa20.37■□□□□ 0.85
CLSTN1-202ENST00000377298 ROBO2Q9HCK4 1378 aa20.37■□□□□ 0.85
CLSTN1-202ENST00000377298 FLAD1Q8NFF5 587 aa20.37■□□□□ 0.85
CLSTN1-202ENST00000377298 ABCC4O15439 1325 aa20.37■□□□□ 0.85
CLSTN1-202ENST00000377298 B4E1Z4 1266 aa20.37■□□□□ 0.85
CLSTN1-202ENST00000377298 CCDC129Q6ZRS4 1044 aa20.37■□□□□ 0.85
CLSTN1-202ENST00000377298 ALDH1B1P30837 517 aa20.37■□□□□ 0.85
CLSTN1-202ENST00000377298 H0YHG0 523 aa20.36■□□□□ 0.85
CLSTN1-202ENST00000377298 ZRSR2Q15696 482 aaKnown RBP20.36■□□□□ 0.85
CLSTN1-202ENST00000377298 SPATA5Q8NB90 893 aa20.36■□□□□ 0.85
CLSTN1-202ENST00000377298 KCNQ3O43525 872 aa20.36■□□□□ 0.85
CLSTN1-202ENST00000377298 FAM200AQ8TCP9 573 aa20.36■□□□□ 0.85
CLSTN1-202ENST00000377298 SAP30BPQ9UHR5 308 aaKnown RBP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms