RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 ZNF277Q9NRM2 450 aaPredicted RBP27.82■■■□□ 2.04
HLA-C-202ENST00000376237 CYP2E1P05181 493 aaPredicted RBP27.81■■■□□ 2.04
HLA-C-202ENST00000376237 IARSP41252 1262 aaKnown RBP27.81■■■□□ 2.04
HLA-C-202ENST00000376237 DOK7Q18PE1 504 aa27.81■■■□□ 2.04
HLA-C-202ENST00000376237 LARGE2Q8N3Y3 721 aa27.81■■■□□ 2.04
HLA-C-202ENST00000376237 KBTBD3Q8NAB2 608 aa27.81■■■□□ 2.04
HLA-C-202ENST00000376237 WDR66Q8TBY9 1149 aa27.81■■■□□ 2.04
HLA-C-202ENST00000376237 FER1L6Q2WGJ9 1857 aa27.8■■■□□ 2.04
HLA-C-202ENST00000376237 LRRFIP1Q32MZ4 808 aaKnown RBP27.8■■■□□ 2.04
HLA-C-202ENST00000376237 NDUFB9Q9Y6M9 179 aa27.8■■■□□ 2.04
HLA-C-202ENST00000376237 IGSF3O75054 1194 aa27.79■■■□□ 2.04
HLA-C-202ENST00000376237 ZGPATQ8N5A5 531 aaKnown RBP27.79■■■□□ 2.04
HLA-C-202ENST00000376237 EDC3Q96F86 508 aaKnown RBP27.79■■■□□ 2.04
HLA-C-202ENST00000376237 ECE2O60344 883 aa27.78■■■□□ 2.04
HLA-C-202ENST00000376237 ARHGAP27Q6ZUM4 889 aa27.78■■■□□ 2.04
HLA-C-202ENST00000376237 FSD1Q9BTV5 496 aa27.78■■■□□ 2.04
HLA-C-202ENST00000376237 ANTXR1Q9H6X2 564 aa27.78■■■□□ 2.04
HLA-C-202ENST00000376237 DBNDD1Q9H9R9 158 aa27.78■■■□□ 2.04
HLA-C-202ENST00000376237 FAM205AQ6ZU69 1335 aa27.78■■■□□ 2.04
HLA-C-202ENST00000376237 AKAP11Q9UKA4 1901 aa27.78■■■□□ 2.04
HLA-C-202ENST00000376237 TBC1D22AQ8WUA7 517 aa27.77■■■□□ 2.04
HLA-C-202ENST00000376237 SALL1Q9NSC2 1324 aa27.77■■■□□ 2.04
HLA-C-202ENST00000376237 RFX7Q2KHR2 1363 aa27.77■■■□□ 2.04
HLA-C-202ENST00000376237 HIP1O00291 1037 aa27.77■■■□□ 2.04
HLA-C-202ENST00000376237 CDC45O75419 566 aa27.77■■■□□ 2.04
HLA-C-202ENST00000376237 CHAF1AQ13111 956 aaPredicted RBP27.77■■■□□ 2.04
HLA-C-202ENST00000376237 COL1A1P02452 1464 aaPredicted RBP27.76■■■□□ 2.03
HLA-C-202ENST00000376237 CASC1Q6TDU7 716 aa27.76■■■□□ 2.03
HLA-C-202ENST00000376237 NIM1KQ8IY84 436 aa27.76■■■□□ 2.03
HLA-C-202ENST00000376237 JDP2Q8WYK2 163 aa27.76■■■□□ 2.03
HLA-C-202ENST00000376237 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.76■■■□□ 2.03
HLA-C-202ENST00000376237 YBX3P16989 372 aaKnown RBP eCLIP27.75■■■□□ 2.03
HLA-C-202ENST00000376237 SPTY2D1Q68D10 685 aaPredicted RBP27.75■■■□□ 2.03
HLA-C-202ENST00000376237 ZSCAN25Q6NSZ9 544 aa27.75■■■□□ 2.03
HLA-C-202ENST00000376237 MAP3K12Q12852 859 aa27.74■■■□□ 2.03
HLA-C-202ENST00000376237 TTLL5Q6EMB2 1281 aa27.74■■■□□ 2.03
HLA-C-202ENST00000376237 PIH1D3Q9NQM4 214 aaKnown RBP27.74■■■□□ 2.03
HLA-C-202ENST00000376237 LRP2BPQ9P2M1 347 aa27.74■■■□□ 2.03
HLA-C-202ENST00000376237 ZFYP08048 801 aaPredicted RBP27.73■■■□□ 2.03
HLA-C-202ENST00000376237 GTF2IP78347 998 aa27.73■■■□□ 2.03
HLA-C-202ENST00000376237 RASSF7Q02833 373 aa27.73■■■□□ 2.03
HLA-C-202ENST00000376237 GPR162Q16538 588 aa27.73■■■□□ 2.03
HLA-C-202ENST00000376237 STRIP1Q5VSL9 837 aa27.73■■■□□ 2.03
HLA-C-202ENST00000376237 TBC1D9Q6ZT07 1266 aa27.73■■■□□ 2.03
HLA-C-202ENST00000376237 ABCF2Q9UG63 623 aa27.73■■■□□ 2.03
HLA-C-202ENST00000376237 ZNRF3Q9ULT6 936 aa27.73■■■□□ 2.03
HLA-C-202ENST00000376237 GRIN3BO60391 1043 aa27.72■■■□□ 2.03
HLA-C-202ENST00000376237 TMED8Q6PL24 325 aaPredicted RBP27.72■■■□□ 2.03
HLA-C-202ENST00000376237 IDH1O75874 414 aaKnown RBP27.72■■■□□ 2.03
HLA-C-202ENST00000376237 LMNB1P20700 586 aa27.72■■■□□ 2.03
HLA-C-202ENST00000376237 CHMLP26374 656 aa27.72■■■□□ 2.03
HLA-C-202ENST00000376237 FKBP1AP62942 108 aaKnown RBP27.72■■■□□ 2.03
HLA-C-202ENST00000376237 SUGT1Q9Y2Z0 365 aa27.72■■■□□ 2.03
HLA-C-202ENST00000376237 USP17L3A6NCW0 530 aa27.71■■■□□ 2.03
HLA-C-202ENST00000376237 USP17L4A6NCW7 530 aa27.71■■■□□ 2.03
HLA-C-202ENST00000376237 ERICH6Q7L0X2 663 aa27.71■■■□□ 2.03
HLA-C-202ENST00000376237 USP17L1Q7RTZ2 530 aa27.71■■■□□ 2.03
HLA-C-202ENST00000376237 DIAPH3Q9NSV4 1193 aa27.71■■■□□ 2.03
HLA-C-202ENST00000376237 MFSD14BQ5SR56 506 aa27.7■■■□□ 2.02
HLA-C-202ENST00000376237 EIF5BO60841 1220 aaKnown RBP27.69■■■□□ 2.02
HLA-C-202ENST00000376237 JAG2Q9Y219 1238 aa27.69■■■□□ 2.02
HLA-C-202ENST00000376237 MYH13Q9UKX3 1938 aa27.69■■■□□ 2.02
HLA-C-202ENST00000376237 YDJCA8MPS7 323 aa27.68■■■□□ 2.02
HLA-C-202ENST00000376237 RNF113AO15541 343 aaKnown RBP27.68■■■□□ 2.02
HLA-C-202ENST00000376237 LDHBP07195 334 aaKnown RBP27.68■■■□□ 2.02
HLA-C-202ENST00000376237 C8orf34Q49A92 452 aa27.68■■■□□ 2.02
HLA-C-202ENST00000376237 SLC9C2Q5TAH2 1124 aa27.68■■■□□ 2.02
HLA-C-202ENST00000376237 RUFY2Q8WXA3 655 aa27.68■■■□□ 2.02
HLA-C-202ENST00000376237 FBXW7Q969H0 707 aa27.68■■■□□ 2.02
HLA-C-202ENST00000376237 RAI14Q9P0K7 980 aa27.68■■■□□ 2.02
HLA-C-202ENST00000376237 UBE3CQ15386 1083 aa27.67■■■□□ 2.02
HLA-C-202ENST00000376237 ADD2P35612 726 aa27.67■■■□□ 2.02
HLA-C-202ENST00000376237 PRELPP51888 382 aa27.67■■■□□ 2.02
HLA-C-202ENST00000376237 DACT2Q5SW24 774 aa27.67■■■□□ 2.02
HLA-C-202ENST00000376237 KCNQ5Q9NR82 932 aa27.67■■■□□ 2.02
HLA-C-202ENST00000376237 COL4A5P29400 1685 aa27.66■■■□□ 2.02
HLA-C-202ENST00000376237 PRDX5P30044 214 aa27.66■■■□□ 2.02
HLA-C-202ENST00000376237 AK9Q5TCS8 1911 aa27.65■■■□□ 2.02
HLA-C-202ENST00000376237 MYO3BQ8WXR4 1341 aa27.65■■■□□ 2.02
HLA-C-202ENST00000376237 PDE6AP16499 860 aa27.65■■■□□ 2.02
HLA-C-202ENST00000376237 GOLGB1Q14789 3259 aaKnown RBP27.64■■■□□ 2.02
HLA-C-202ENST00000376237 FZD9O00144 591 aa27.64■■■□□ 2.02
HLA-C-202ENST00000376237 TNIP1Q15025 636 aa27.64■■■□□ 2.02
HLA-C-202ENST00000376237 DZIP1Q86YF9 867 aaKnown RBP27.64■■■□□ 2.02
HLA-C-202ENST00000376237 MAGEB6Q8N7X4 407 aa27.64■■■□□ 2.02
HLA-C-202ENST00000376237 APPBP2Q92624 585 aa27.64■■■□□ 2.02
HLA-C-202ENST00000376237 HELLSQ9NRZ9 838 aa27.64■■■□□ 2.02
HLA-C-202ENST00000376237 CHD4Q14839 1912 aa27.64■■■□□ 2.01
HLA-C-202ENST00000376237 VIL1P09327 827 aaKnown RBP27.63■■■□□ 2.01
HLA-C-202ENST00000376237 EIF6P56537 245 aaKnown RBP27.63■■■□□ 2.01
HLA-C-202ENST00000376237 GSTO1P78417 241 aa27.63■■■□□ 2.01
HLA-C-202ENST00000376237 ZMYM1Q5SVZ6 1142 aa27.63■■■□□ 2.01
HLA-C-202ENST00000376237 CWC27Q6UX04 472 aaKnown RBP27.63■■■□□ 2.01
HLA-C-202ENST00000376237 NSUN4Q96CB9 384 aaKnown RBP27.63■■■□□ 2.01
HLA-C-202ENST00000376237 DOCK2Q92608 1830 aa27.63■■■□□ 2.01
HLA-C-202ENST00000376237 RAD50Q92878 1312 aa27.63■■■□□ 2.01
HLA-C-202ENST00000376237 RAD17O75943 681 aa27.62■■■□□ 2.01
HLA-C-202ENST00000376237 MECOMQ03112 1051 aa27.62■■■□□ 2.01
HLA-C-202ENST00000376237 NMIQ13287 307 aaPredicted RBP27.62■■■□□ 2.01
HLA-C-202ENST00000376237 CIAPIN1Q6FI81 312 aa27.62■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms