RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 MYO5AQ9Y4I1 1855 aaKnown RBP13.32□□□□□ -0.28
PDPN-202ENST00000376057 LAMA4Q16363 1823 aa13.32□□□□□ -0.28
PDPN-202ENST00000376057 ATP2B4P23634 1241 aa13.31□□□□□ -0.28
PDPN-202ENST00000376057 CTNNA3Q9UI47 895 aa13.31□□□□□ -0.28
PDPN-202ENST00000376057 NEK4P51957 841 aa13.31□□□□□ -0.28
PDPN-202ENST00000376057 CUL4AQ13619 759 aa13.31□□□□□ -0.28
PDPN-202ENST00000376057 ALX1Q15699 326 aa13.31□□□□□ -0.28
PDPN-202ENST00000376057 PRPF40BQ6NWY9 871 aaKnown RBP13.31□□□□□ -0.28
PDPN-202ENST00000376057 M0R2C6 588 aa13.31□□□□□ -0.28
PDPN-202ENST00000376057 SRGNP10124 158 aa13.31□□□□□ -0.28
PDPN-202ENST00000376057 HSPD1P10809 573 aaKnown RBP13.31□□□□□ -0.28
PDPN-202ENST00000376057 SF3B2Q13435 895 aaKnown RBP13.31□□□□□ -0.28
PDPN-202ENST00000376057 SLC16A10Q8TF71 515 aa13.31□□□□□ -0.28
PDPN-202ENST00000376057 INTS4Q96HW7 963 aaKnown RBP13.31□□□□□ -0.28
PDPN-202ENST00000376057 CWC22Q9HCG8 908 aaKnown RBP13.31□□□□□ -0.28
PDPN-202ENST00000376057 DLEC1Q9Y238 1755 aa13.3□□□□□ -0.28
PDPN-202ENST00000376057 CACNA1SQ13698 1873 aa13.3□□□□□ -0.28
PDPN-202ENST00000376057 PDE6AP16499 860 aa13.3□□□□□ -0.28
PDPN-202ENST00000376057 ALDH1B1P30837 517 aa13.3□□□□□ -0.28
PDPN-202ENST00000376057 EN1Q05925 392 aaPredicted RBP13.3□□□□□ -0.28
PDPN-202ENST00000376057 RUFY3Q7L099 469 aa13.3□□□□□ -0.28
PDPN-202ENST00000376057 SEC62Q99442 399 aaKnown RBP13.3□□□□□ -0.28
PDPN-202ENST00000376057 COL1A1P02452 1464 aaPredicted RBP13.3□□□□□ -0.28
PDPN-202ENST00000376057 HMGB1P09429 215 aaKnown RBP13.3□□□□□ -0.28
PDPN-202ENST00000376057 HIBADHP31937 336 aaKnown RBP13.3□□□□□ -0.28
PDPN-202ENST00000376057 SLC9C2Q5TAH2 1124 aa13.3□□□□□ -0.28
PDPN-202ENST00000376057 PI16Q6UXB8 463 aa13.3□□□□□ -0.28
PDPN-202ENST00000376057 FBXL16Q8N461 479 aa13.3□□□□□ -0.28
PDPN-202ENST00000376057 STYK1Q6J9G0 422 aa13.29□□□□□ -0.28
PDPN-202ENST00000376057 ANO8Q9HCE9 1232 aaPredicted RBP13.29□□□□□ -0.28
PDPN-202ENST00000376057 CHMP5Q9NZZ3 219 aa13.29□□□□□ -0.28
PDPN-202ENST00000376057 CYP46A1Q9Y6A2 500 aa13.29□□□□□ -0.28
PDPN-202ENST00000376057 KIF13BQ9NQT8 1826 aa13.29□□□□□ -0.28
PDPN-202ENST00000376057 MMP10P09238 476 aa13.29□□□□□ -0.28
PDPN-202ENST00000376057 GNAT2P19087 354 aa13.29□□□□□ -0.28
PDPN-202ENST00000376057 KCNJ4P48050 445 aa13.29□□□□□ -0.28
PDPN-202ENST00000376057 ATP6V0A2Q9Y487 856 aa13.29□□□□□ -0.28
PDPN-202ENST00000376057 ANKRD1Q15327 319 aa13.28□□□□□ -0.28
PDPN-202ENST00000376057 MASTLQ96GX5 879 aa13.28□□□□□ -0.28
PDPN-202ENST00000376057 CCDC88AQ3V6T2 1871 aa13.28□□□□□ -0.28
PDPN-202ENST00000376057 SNAP23O00161 211 aa13.28□□□□□ -0.28
PDPN-202ENST00000376057 FOXP2O15409 715 aa13.28□□□□□ -0.28
PDPN-202ENST00000376057 GYG1P46976 350 aa13.28□□□□□ -0.28
PDPN-202ENST00000376057 WASHC4Q2M389 1173 aa13.28□□□□□ -0.28
PDPN-202ENST00000376057 CCDC24Q8N4L8 307 aa13.28□□□□□ -0.28
PDPN-202ENST00000376057 ZGPATQ8N5A5 531 aaKnown RBP13.28□□□□□ -0.28
PDPN-202ENST00000376057 TDRD7Q8NHU6 1098 aaKnown RBP13.28□□□□□ -0.28
PDPN-202ENST00000376057 ZSCAN31Q96LW9 406 aaPredicted RBP13.28□□□□□ -0.28
PDPN-202ENST00000376057 PUS7LQ9H0K6 701 aaKnown RBP13.28□□□□□ -0.28
PDPN-202ENST00000376057 ZNF532Q9HCE3 1301 aa13.28□□□□□ -0.28
PDPN-202ENST00000376057 CCDC129Q6ZRS4 1044 aa13.27□□□□□ -0.28
PDPN-202ENST00000376057 TIAM2Q8IVF5 1701 aa13.27□□□□□ -0.28
PDPN-202ENST00000376057 WDR19Q8NEZ3 1342 aa13.27□□□□□ -0.28
PDPN-202ENST00000376057 GPAA1O43292 621 aa13.27□□□□□ -0.29
PDPN-202ENST00000376057 IL1R1P14778 569 aa13.27□□□□□ -0.29
PDPN-202ENST00000376057 ZNF804AQ7Z570 1209 aa13.27□□□□□ -0.29
PDPN-202ENST00000376057 STRBPQ96SI9 672 aaKnown RBP13.27□□□□□ -0.29
PDPN-202ENST00000376057 PPEF1O14829 653 aaPredicted RBP13.26□□□□□ -0.29
PDPN-202ENST00000376057 CHGBP05060 677 aa13.26□□□□□ -0.29
PDPN-202ENST00000376057 CYP21A2P08686 494 aa13.26□□□□□ -0.29
PDPN-202ENST00000376057 CASTP20810 708 aaKnown RBP13.26□□□□□ -0.29
PDPN-202ENST00000376057 RPS6KB1P23443 525 aa13.26□□□□□ -0.29
PDPN-202ENST00000376057 GPSM2P81274 684 aa13.26□□□□□ -0.29
PDPN-202ENST00000376057 SPTY2D1Q68D10 685 aaPredicted RBP13.26□□□□□ -0.29
PDPN-202ENST00000376057 VPS37DQ86XT2 251 aa13.26□□□□□ -0.29
PDPN-202ENST00000376057 JAKMIP1Q96N16 626 aaKnown RBP13.26□□□□□ -0.29
PDPN-202ENST00000376057 GGA1Q9UJY5 639 aa13.26□□□□□ -0.29
PDPN-202ENST00000376057 WWC3Q9ULE0 1092 aa13.26□□□□□ -0.29
PDPN-202ENST00000376057 LIMCH1Q9UPQ0 1083 aa13.26□□□□□ -0.29
PDPN-202ENST00000376057 IDH1O75874 414 aaKnown RBP13.26□□□□□ -0.29
PDPN-202ENST00000376057 ADCK5Q3MIX3 580 aa13.26□□□□□ -0.29
PDPN-202ENST00000376057 TMX3Q96JJ7 454 aa13.26□□□□□ -0.29
PDPN-202ENST00000376057 SH2B1Q9NRF2 756 aaPredicted RBP13.26□□□□□ -0.29
PDPN-202ENST00000376057 ANKIB1Q9P2G1 1089 aa13.26□□□□□ -0.29
PDPN-202ENST00000376057 C10orf71Q711Q0 1435 aa13.26□□□□□ -0.29
PDPN-202ENST00000376057 GRIPAP1Q4V328 841 aa13.26□□□□□ -0.29
PDPN-202ENST00000376057 WDR66Q8TBY9 1149 aa13.26□□□□□ -0.29
PDPN-202ENST00000376057 PDRG1Q9NUG6 133 aa13.26□□□□□ -0.29
PDPN-202ENST00000376057 PATL2C9JE40 543 aaKnown RBP13.25□□□□□ -0.29
PDPN-202ENST00000376057 AGXT2Q9BYV1 514 aa13.25□□□□□ -0.29
PDPN-202ENST00000376057 GIMAP6Q6P9H5 292 aa13.25□□□□□ -0.29
PDPN-202ENST00000376057 BLOC1S2Q6QNY1 142 aa13.25□□□□□ -0.29
PDPN-202ENST00000376057 MAGEB6Q8N7X4 407 aa13.25□□□□□ -0.29
PDPN-202ENST00000376057 NEK1Q96PY6 1258 aa13.25□□□□□ -0.29
PDPN-202ENST00000376057 AK2P54819 239 aa13.24□□□□□ -0.29
PDPN-202ENST00000376057 IMMTQ16891 758 aaKnown RBP13.24□□□□□ -0.29
PDPN-202ENST00000376057 CLEC17AQ6ZS10 378 aa13.24□□□□□ -0.29
PDPN-202ENST00000376057 TBC1D16Q8TBP0 767 aa13.24□□□□□ -0.29
PDPN-202ENST00000376057 LRP2BPQ9P2M1 347 aa13.24□□□□□ -0.29
PDPN-202ENST00000376057 WTIPA6NIX2 430 aaPredicted RBP13.24□□□□□ -0.29
PDPN-202ENST00000376057 FGAP02671 866 aa13.24□□□□□ -0.29
PDPN-202ENST00000376057 PDIA4P13667 645 aaKnown RBP13.24□□□□□ -0.29
PDPN-202ENST00000376057 KLRK1P26718 216 aa13.24□□□□□ -0.29
PDPN-202ENST00000376057 SLFNL1Q499Z3 407 aa13.24□□□□□ -0.29
PDPN-202ENST00000376057 CERS3Q8IU89 383 aa13.24□□□□□ -0.29
PDPN-202ENST00000376057 UPF3BQ9BZI7 483 aaKnown RBP13.24□□□□□ -0.29
PDPN-202ENST00000376057 EXOSC10Q01780 885 aaKnown RBP13.23□□□□□ -0.29
PDPN-202ENST00000376057 AIDAQ96BJ3 306 aa13.23□□□□□ -0.29
PDPN-202ENST00000376057 FAM205AQ6ZU69 1335 aa13.23□□□□□ -0.29
PDPN-202ENST00000376057 NT5C2P49902 561 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms