RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 CCAR2Q8N163 923 aaKnown RBP15.11■□□□□ 0.01
MSH5-204ENST00000375755 GTF3C6Q969F1 213 aa15.11■□□□□ 0.01
MSH5-204ENST00000375755 FAM227BQ96M60 508 aa15.11■□□□□ 0.01
MSH5-204ENST00000375755 NEMFO60524 1076 aa15.1■□□□□ 0.01
MSH5-204ENST00000375755 STARD3NLO95772 234 aa15.1■□□□□ 0.01
MSH5-204ENST00000375755 TCIRG1Q13488 830 aa15.1■□□□□ 0.01
MSH5-204ENST00000375755 FAM98CQ17RN3 349 aaKnown RBP15.1■□□□□ 0.01
MSH5-204ENST00000375755 PTF1AQ7RTS3 328 aa15.1■□□□□ 0.01
MSH5-204ENST00000375755 BICD2Q8TD16 824 aa15.1■□□□□ 0.01
MSH5-204ENST00000375755 MRFAP1L1Q96HT8 127 aa15.1■□□□□ 0.01
MSH5-204ENST00000375755 DBNDD2Q9BQY9 259 aa15.1■□□□□ 0.01
MSH5-204ENST00000375755 ISCA1Q9BUE6 129 aa15.1■□□□□ 0.01
MSH5-204ENST00000375755 LRP6O75581 1613 aa15.1■□□□□ 0.01
MSH5-204ENST00000375755 SPATA31A5Q5VU36 1347 aa15.1■□□□□ 0.01
MSH5-204ENST00000375755 SPATA31A7Q8IWB4 1347 aa15.1■□□□□ 0.01
MSH5-204ENST00000375755 FAM193AP78312 1265 aa15.1■□□□□ 0.01
MSH5-204ENST00000375755 TNNI3KQ59H18 835 aa15.1■□□□□ 0.01
MSH5-204ENST00000375755 ATG9AQ7Z3C6 839 aa15.1■□□□□ 0.01
MSH5-204ENST00000375755 FILIP1Q7Z7B0 1213 aa15.1■□□□□ 0.01
MSH5-204ENST00000375755 CCDC191Q8NCU4 936 aa15.1■□□□□ 0.01
MSH5-204ENST00000375755 LRRN4CLQ8ND94 238 aa15.1■□□□□ 0.01
MSH5-204ENST00000375755 KCNB2Q92953 911 aa15.1■□□□□ 0.01
MSH5-204ENST00000375755 ZBTB9Q96C00 473 aa15.1■□□□□ 0.01
MSH5-204ENST00000375755 FPGT-TNNI3KV9GXZ4 949 aa15.1■□□□□ 0.01
MSH5-204ENST00000375755 JCADQ9P266 1359 aa15.09■□□□□ 0.01
MSH5-204ENST00000375755 H2AFXP16104 143 aaPredicted RBP15.09■□□□□ 0.01
MSH5-204ENST00000375755 HNRNPH2P55795 449 aaKnown RBP15.09■□□□□ 0.01
MSH5-204ENST00000375755 SLIT2O94813 1529 aa15.09■□□□□ 0.01
MSH5-204ENST00000375755 GOLGA6L19H0YKK7 550 aa15.09■□□□□ 0.01
MSH5-204ENST00000375755 TIMM10P62072 90 aa15.09■□□□□ 0.01
MSH5-204ENST00000375755 ERCC6LQ2NKX8 1250 aa15.09■□□□□ 0.01
MSH5-204ENST00000375755 FAM182BQ5T319 152 aa15.09■□□□□ 0.01
MSH5-204ENST00000375755 SMIM5Q71RC9 77 aa15.09■□□□□ 0.01
MSH5-204ENST00000375755 FHOD1Q9Y613 1164 aa15.09■□□□□ 0.01
MSH5-204ENST00000375755 PDCP20941 246 aa15.08■□□□□ 0.01
MSH5-204ENST00000375755 BMS1Q14692 1282 aaKnown RBP15.08■□□□□ 0.01
MSH5-204ENST00000375755 KIF6Q6ZMV9 814 aa15.08■□□□□ 0.01
MSH5-204ENST00000375755 CREBRFQ8IUR6 639 aa15.08■□□□□ 0.01
MSH5-204ENST00000375755 NECTIN1Q15223 517 aa15.08■□□□□ 0
MSH5-204ENST00000375755 TCEANC2Q96MN5 208 aa15.08■□□□□ 0
MSH5-204ENST00000375755 MAP3K15Q6ZN16 1313 aa15.07■□□□□ 0
MSH5-204ENST00000375755 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.07■□□□□ 0
MSH5-204ENST00000375755 CLCN6P51797 869 aa15.07■□□□□ 0
MSH5-204ENST00000375755 GPATCH3Q96I76 525 aa15.07■□□□□ 0
MSH5-204ENST00000375755 A0A087WWV3 80 aa15.06■□□□□ 0
MSH5-204ENST00000375755 CAVIN2O95810 425 aa15.06■□□□□ 0
MSH5-204ENST00000375755 HSPA1LP34931 641 aa15.06■□□□□ 0
MSH5-204ENST00000375755 NMIQ13287 307 aaPredicted RBP15.06■□□□□ 0
MSH5-204ENST00000375755 ITPK1Q13572 414 aa15.06■□□□□ 0
MSH5-204ENST00000375755 RUFY2Q8WXA3 655 aa15.06■□□□□ 0
MSH5-204ENST00000375755 NEUROD6Q96NK8 337 aa15.06■□□□□ 0
MSH5-204ENST00000375755 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.06■□□□□ 0
MSH5-204ENST00000375755 RBM8AQ9Y5S9 174 aaKnown RBP15.06■□□□□ 0
MSH5-204ENST00000375755 A0A0D9SFI3 127 aa15.06■□□□□ 0
MSH5-204ENST00000375755 ATP6V1AP38606 617 aa15.06■□□□□ 0
MSH5-204ENST00000375755 PLA2G4AP47712 749 aa15.06■□□□□ 0
MSH5-204ENST00000375755 RNF20Q5VTR2 975 aa15.06■□□□□ 0
MSH5-204ENST00000375755 CREB3L3Q68CJ9 461 aa15.06■□□□□ 0
MSH5-204ENST00000375755 NGLY1Q96IV0 654 aa15.06■□□□□ 0
MSH5-204ENST00000375755 TEX13AQ9BXU3 409 aaPredicted RBP15.06■□□□□ 0
MSH5-204ENST00000375755 L2HGDHQ9H9P8 463 aa15.06■□□□□ 0
MSH5-204ENST00000375755 COL15A1P39059 1388 aa15.05■□□□□ 0
MSH5-204ENST00000375755 PNMA6AP0CW24 399 aaPredicted RBP15.05■□□□□ 0
MSH5-204ENST00000375755 ZKSCAN1P17029 563 aaPredicted RBP15.05■□□□□ 0
MSH5-204ENST00000375755 GIGYF2Q6Y7W6 1299 aaKnown RBP15.05■□□□□ 0
MSH5-204ENST00000375755 EVI5LQ96CN4 794 aa15.05■□□□□ 0
MSH5-204ENST00000375755 TRIM34Q9BYJ4 488 aa15.05■□□□□ 0
MSH5-204ENST00000375755 KCND1Q9NSA2 647 aa15.05■□□□□ 0
MSH5-204ENST00000375755 MYH14Q7Z406 1995 aaKnown RBP15.05■□□□□ -0
MSH5-204ENST00000375755 NUP98P52948 1817 aa15.05■□□□□ -0
MSH5-204ENST00000375755 INTS5Q6P9B9 1019 aaKnown RBP15.05■□□□□ -0
MSH5-204ENST00000375755 NLRP10Q86W26 655 aa15.05■□□□□ -0
MSH5-204ENST00000375755 ZFP91Q96JP5 570 aaPredicted RBP15.04■□□□□ -0
MSH5-204ENST00000375755 FSD1Q9BTV5 496 aa15.04■□□□□ -0
MSH5-204ENST00000375755 FEZ2Q9UHY8 353 aaPredicted RBP15.04■□□□□ -0
MSH5-204ENST00000375755 STK3Q13188 491 aa15.04■□□□□ -0
MSH5-204ENST00000375755 SNW1Q13573 536 aaKnown RBP15.04■□□□□ -0
MSH5-204ENST00000375755 DDX46Q7L014 1031 aaKnown RBP15.04■□□□□ -0
MSH5-204ENST00000375755 ZNF589Q86UQ0 364 aaPredicted RBP15.04■□□□□ -0
MSH5-204ENST00000375755 DZIP3Q86Y13 1208 aaKnown RBP15.04■□□□□ -0
MSH5-204ENST00000375755 DHX40Q8IX18 779 aaKnown RBP15.04■□□□□ -0
MSH5-204ENST00000375755 UBN2Q6ZU65 1347 aa15.04■□□□□ -0
MSH5-204ENST00000375755 KIF2AO00139 706 aaPredicted RBP15.03■□□□□ -0
MSH5-204ENST00000375755 STX1AQ16623 288 aa15.03■□□□□ -0
MSH5-204ENST00000375755 CCDC93Q567U6 631 aa15.03■□□□□ -0
MSH5-204ENST00000375755 E4F1Q66K89 784 aaPredicted RBP15.03■□□□□ -0
MSH5-204ENST00000375755 SEC62Q99442 399 aaKnown RBP15.03■□□□□ -0
MSH5-204ENST00000375755 THRAP3Q9Y2W1 955 aaKnown RBP15.03■□□□□ -0
MSH5-204ENST00000375755 TAF6LQ9Y6J9 622 aa15.03■□□□□ -0
MSH5-204ENST00000375755 BECN2A8MW95 431 aa15.03■□□□□ -0
MSH5-204ENST00000375755 SYT10Q6XYQ8 523 aa15.03■□□□□ -0
MSH5-204ENST00000375755 GOLGB1Q14789 3259 aaKnown RBP15.03■□□□□ -0
MSH5-204ENST00000375755 BCL9LQ86UU0 1499 aa15.03■□□□□ -0
MSH5-204ENST00000375755 LOC102724428A0A0B4J2F2 783 aa15.03■□□□□ -0
MSH5-204ENST00000375755 SLC27A2O14975 620 aa15.03■□□□□ -0
MSH5-204ENST00000375755 CRKLP46109 303 aaKnown RBP15.03■□□□□ -0
MSH5-204ENST00000375755 SIK1P57059 783 aa15.03■□□□□ -0
MSH5-204ENST00000375755 RAD51AP2Q09MP3 1159 aa15.03■□□□□ -0
MSH5-204ENST00000375755 RESTQ13127 1097 aa15.03■□□□□ -0
MSH5-204ENST00000375755 ARHGAP29Q52LW3 1261 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms