RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 KRT85P78386 507 aa21.55■■□□□ 1.04
RXRB-202ENST00000374685 LINC00116Q8NCU8 138 aa21.55■■□□□ 1.04
RXRB-202ENST00000374685 TSPY26PQ9H489 355 aa21.55■■□□□ 1.04
RXRB-202ENST00000374685 SLIT2O94813 1529 aa21.55■■□□□ 1.04
RXRB-202ENST00000374685 OFD1O75665 1012 aa21.55■■□□□ 1.04
RXRB-202ENST00000374685 ZFYP08048 801 aaPredicted RBP21.55■■□□□ 1.04
RXRB-202ENST00000374685 HMGB1P09429 215 aaKnown RBP21.55■■□□□ 1.04
RXRB-202ENST00000374685 INCENPQ9NQS7 918 aa21.55■■□□□ 1.04
RXRB-202ENST00000374685 PTPDC1A2A3K4 754 aa21.54■■□□□ 1.04
RXRB-202ENST00000374685 ZNF213O14771 459 aa21.54■■□□□ 1.04
RXRB-202ENST00000374685 IGHMBP2P38935 993 aaKnown RBP21.54■■□□□ 1.04
RXRB-202ENST00000374685 CAMK4Q16566 473 aa21.54■■□□□ 1.04
RXRB-202ENST00000374685 RALYLQ86SE5 291 aaKnown RBP21.54■■□□□ 1.04
RXRB-202ENST00000374685 LPIN2Q92539 896 aa21.54■■□□□ 1.04
RXRB-202ENST00000374685 GOLGA6L4A6NEF3 574 aa21.54■■□□□ 1.04
RXRB-202ENST00000374685 SLC5A1P13866 664 aa21.54■■□□□ 1.04
RXRB-202ENST00000374685 PLCB2Q00722 1185 aa21.54■■□□□ 1.04
RXRB-202ENST00000374685 RASGRF1Q13972 1273 aa21.54■■□□□ 1.04
RXRB-202ENST00000374685 CCDC152Q4G0S7 254 aa21.54■■□□□ 1.04
RXRB-202ENST00000374685 C3orf67Q6ZVT6 689 aa21.54■■□□□ 1.04
RXRB-202ENST00000374685 MAGEB6Q8N7X4 407 aa21.53■■□□□ 1.04
RXRB-202ENST00000374685 PDE6AP16499 860 aa21.53■■□□□ 1.04
RXRB-202ENST00000374685 RXRAP19793 462 aa21.53■■□□□ 1.04
RXRB-202ENST00000374685 ADD2P35612 726 aa21.53■■□□□ 1.04
RXRB-202ENST00000374685 ERFEQ4G0M1 354 aa21.53■■□□□ 1.04
RXRB-202ENST00000374685 CTNNA3Q9UI47 895 aa21.53■■□□□ 1.04
RXRB-202ENST00000374685 PRC1O43663 620 aa21.52■■□□□ 1.04
RXRB-202ENST00000374685 EXOSC10Q01780 885 aaKnown RBP21.52■■□□□ 1.04
RXRB-202ENST00000374685 SMAP1Q8IYB5 467 aaPredicted RBP21.52■■□□□ 1.04
RXRB-202ENST00000374685 AIDAQ96BJ3 306 aa21.52■■□□□ 1.04
RXRB-202ENST00000374685 FTOQ9C0B1 505 aaKnown RBP eCLIP21.52■■□□□ 1.04
RXRB-202ENST00000374685 MYH14Q7Z406 1995 aaKnown RBP21.52■■□□□ 1.04
RXRB-202ENST00000374685 NTSR2O95665 410 aa21.52■■□□□ 1.04
RXRB-202ENST00000374685 OTUD7BQ6GQQ9 843 aa21.52■■□□□ 1.04
RXRB-202ENST00000374685 SPATA5Q8NB90 893 aa21.52■■□□□ 1.04
RXRB-202ENST00000374685 SPATA32Q96LK8 384 aa21.52■■□□□ 1.04
RXRB-202ENST00000374685 ALDH8A1Q9H2A2 487 aaPredicted RBP21.52■■□□□ 1.04
RXRB-202ENST00000374685 SRP68Q9UHB9 627 aaKnown RBP21.52■■□□□ 1.04
RXRB-202ENST00000374685 CTDNEP1O95476 244 aa21.51■■□□□ 1.03
RXRB-202ENST00000374685 CCDC173Q0VFZ6 552 aa21.51■■□□□ 1.03
RXRB-202ENST00000374685 CCDC183Q5T5S1 534 aa21.51■■□□□ 1.03
RXRB-202ENST00000374685 MIGA1Q8NAN2 632 aa21.51■■□□□ 1.03
RXRB-202ENST00000374685 NSUN7Q8NE18 718 aaKnown RBP21.51■■□□□ 1.03
RXRB-202ENST00000374685 NKX2-3Q8TAU0 364 aa21.51■■□□□ 1.03
RXRB-202ENST00000374685 ABCF2Q9UG63 623 aa21.51■■□□□ 1.03
RXRB-202ENST00000374685 MROH5Q6ZUA9 1318 aa21.51■■□□□ 1.03
RXRB-202ENST00000374685 PDIA3P30101 505 aaKnown RBP21.51■■□□□ 1.03
RXRB-202ENST00000374685 KLF18A0A0U1RQI7 1052 aa21.51■■□□□ 1.03
RXRB-202ENST00000374685 PFKFB2O60825 505 aa21.51■■□□□ 1.03
RXRB-202ENST00000374685 CCDC144CPQ8IYA2 1237 aa21.51■■□□□ 1.03
RXRB-202ENST00000374685 TMEM87AQ8NBN3 555 aa21.51■■□□□ 1.03
RXRB-202ENST00000374685 TOMM22Q9NS69 142 aa21.51■■□□□ 1.03
RXRB-202ENST00000374685 LTBP4Q8N2S1 1624 aa21.51■■□□□ 1.03
RXRB-202ENST00000374685 GOLGB1Q14789 3259 aaKnown RBP21.5■■□□□ 1.03
RXRB-202ENST00000374685 NPHP1O15259 732 aa21.5■■□□□ 1.03
RXRB-202ENST00000374685 CHRNDQ07001 517 aa21.5■■□□□ 1.03
RXRB-202ENST00000374685 ARMT1Q9H993 441 aa21.5■■□□□ 1.03
RXRB-202ENST00000374685 GOLGA8BA8MQT2 603 aa21.5■■□□□ 1.03
RXRB-202ENST00000374685 PHF14O94880 888 aa21.5■■□□□ 1.03
RXRB-202ENST00000374685 PARP10Q53GL7 1025 aa21.5■■□□□ 1.03
RXRB-202ENST00000374685 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.5■■□□□ 1.03
RXRB-202ENST00000374685 SMARCC1Q92922 1105 aaPredicted RBP21.5■■□□□ 1.03
RXRB-202ENST00000374685 LIG1P18858 919 aa21.49■■□□□ 1.03
RXRB-202ENST00000374685 TTF1Q15361 905 aaPredicted RBP21.49■■□□□ 1.03
RXRB-202ENST00000374685 CSPP1Q1MSJ5 1256 aa21.49■■□□□ 1.03
RXRB-202ENST00000374685 BARGINQ6ZT62 677 aa21.49■■□□□ 1.03
RXRB-202ENST00000374685 GJB4Q9NTQ9 266 aa21.49■■□□□ 1.03
RXRB-202ENST00000374685 ZNF652Q9Y2D9 606 aa21.49■■□□□ 1.03
RXRB-202ENST00000374685 COL22A1Q8NFW1 1626 aaPredicted RBP21.49■■□□□ 1.03
RXRB-202ENST00000374685 MBD4O95243 580 aa21.49■■□□□ 1.03
RXRB-202ENST00000374685 GYG1P46976 350 aa21.49■■□□□ 1.03
RXRB-202ENST00000374685 ZSCAN25Q6NSZ9 544 aa21.49■■□□□ 1.03
RXRB-202ENST00000374685 UQCRFS1P1P0C7P4 283 aa21.48■■□□□ 1.03
RXRB-202ENST00000374685 FGFR2P21802 821 aa21.48■■□□□ 1.03
RXRB-202ENST00000374685 TRDNQ13061 729 aa21.48■■□□□ 1.03
RXRB-202ENST00000374685 RRP12Q5JTH9 1297 aaKnown RBP21.48■■□□□ 1.03
RXRB-202ENST00000374685 ZSCAN30Q86W11 494 aa21.48■■□□□ 1.03
RXRB-202ENST00000374685 TBC1D10CQ8IV04 446 aa21.48■■□□□ 1.03
RXRB-202ENST00000374685 NCOA7Q8NI08 942 aa21.48■■□□□ 1.03
RXRB-202ENST00000374685 BICD2Q8TD16 824 aa21.48■■□□□ 1.03
RXRB-202ENST00000374685 PPP1R9BQ96SB3 815 aa21.48■■□□□ 1.03
RXRB-202ENST00000374685 LRP2BPQ9P2M1 347 aa21.48■■□□□ 1.03
RXRB-202ENST00000374685 MYH3P11055 1940 aa21.48■■□□□ 1.03
RXRB-202ENST00000374685 B4E1Z4 1266 aa21.47■■□□□ 1.03
RXRB-202ENST00000374685 GNPATO15228 680 aa21.47■■□□□ 1.03
RXRB-202ENST00000374685 PRKAB2O43741 272 aa21.47■■□□□ 1.03
RXRB-202ENST00000374685 MCM5P33992 734 aa21.47■■□□□ 1.03
RXRB-202ENST00000374685 TBC1D9BQ66K14 1250 aa21.47■■□□□ 1.03
RXRB-202ENST00000374685 CKAP2LQ8IYA6 745 aa21.47■■□□□ 1.03
RXRB-202ENST00000374685 MYO5AQ9Y4I1 1855 aaKnown RBP21.47■■□□□ 1.03
RXRB-202ENST00000374685 CTDSPL2Q05D32 466 aa21.47■■□□□ 1.03
RXRB-202ENST00000374685 USP21Q9UK80 565 aa21.47■■□□□ 1.03
RXRB-202ENST00000374685 ANTXR2P58335 489 aa21.46■■□□□ 1.03
RXRB-202ENST00000374685 MAP3K12Q12852 859 aa21.46■■□□□ 1.03
RXRB-202ENST00000374685 CPLX1O14810 134 aa21.46■■□□□ 1.03
RXRB-202ENST00000374685 ARID4AP29374 1257 aaPredicted RBP21.46■■□□□ 1.03
RXRB-202ENST00000374685 LEO1Q8WVC0 666 aaPredicted RBP21.46■■□□□ 1.03
RXRB-202ENST00000374685 JAG2Q9Y219 1238 aa21.46■■□□□ 1.03
RXRB-202ENST00000374685 VPS37DQ86XT2 251 aa21.45■■□□□ 1.02
RXRB-202ENST00000374685 MYL10Q9BUA6 226 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms