RNA–Protein interactions for RNA: ENST00000374257.5

PTBP3-205, Transcript of polypyrimidine tract binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene PTBP3, Length 7,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP3-205ENST00000374257 TCP10L2B9ZVM9 353 aa9.68□□□□□ -0.86
PTBP3-205ENST00000374257 SEMA3EO15041 775 aa9.68□□□□□ -0.86
PTBP3-205ENST00000374257 TMEM266Q2M3C6 531 aa9.68□□□□□ -0.86
PTBP3-205ENST00000374257 SMARCC2Q8TAQ2 1214 aa9.68□□□□□ -0.86
PTBP3-205ENST00000374257 EPS15P42566 896 aa9.67□□□□□ -0.86
PTBP3-205ENST00000374257 SSRP1Q08945 709 aaKnown RBP9.67□□□□□ -0.86
PTBP3-205ENST00000374257 IARSP41252 1262 aaKnown RBP9.67□□□□□ -0.86
PTBP3-205ENST00000374257 BEND3Q5T5X7 828 aa9.67□□□□□ -0.86
PTBP3-205ENST00000374257 MICU3Q86XE3 530 aa9.67□□□□□ -0.86
PTBP3-205ENST00000374257 DDX11Q96FC9 970 aa9.67□□□□□ -0.86
PTBP3-205ENST00000374257 AATFQ9NY61 560 aaKnown RBP eCLIP9.67□□□□□ -0.863e-8■□□□□ 10.6
PTBP3-205ENST00000374257 DDX49Q9Y6V7 483 aaKnown RBP9.67□□□□□ -0.86
PTBP3-205ENST00000374257 DDX11L8A8MPP1 907 aa9.67□□□□□ -0.86
PTBP3-205ENST00000374257 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.67□□□□□ -0.864e-6■■■□□ 17.1
PTBP3-205ENST00000374257 RBM27Q9P2N5 1060 aaKnown RBP9.67□□□□□ -0.86
PTBP3-205ENST00000374257 LAMC1P11047 1609 aa9.67□□□□□ -0.86
PTBP3-205ENST00000374257 A0A0G2JLW4 131 aa9.67□□□□□ -0.86
PTBP3-205ENST00000374257 MAPKAPK5Q8IW41 473 aa9.67□□□□□ -0.86
PTBP3-205ENST00000374257 PLEKHF1Q96S99 279 aa9.67□□□□□ -0.86
PTBP3-205ENST00000374257 COA1Q9GZY4 146 aa9.67□□□□□ -0.86
PTBP3-205ENST00000374257 FAM13BQ9NYF5 915 aa9.67□□□□□ -0.86
PTBP3-205ENST00000374257 USP17L3A6NCW0 530 aa9.67□□□□□ -0.86
PTBP3-205ENST00000374257 USP17L4A6NCW7 530 aa9.67□□□□□ -0.86
PTBP3-205ENST00000374257 USP17L1Q7RTZ2 530 aa9.67□□□□□ -0.86
PTBP3-205ENST00000374257 CCDC148Q8NFR7 591 aa9.67□□□□□ -0.86
PTBP3-205ENST00000374257 NEK1Q96PY6 1258 aa9.67□□□□□ -0.86
PTBP3-205ENST00000374257 PREX1Q8TCU6 1659 aa9.66□□□□□ -0.86
PTBP3-205ENST00000374257 PDE8BO95263 885 aa9.66□□□□□ -0.86
PTBP3-205ENST00000374257 SYNE4Q8N205 404 aa9.66□□□□□ -0.86
PTBP3-205ENST00000374257 SEC31BQ9NQW1 1179 aa9.66□□□□□ -0.86
PTBP3-205ENST00000374257 CEP131Q9UPN4 1083 aa9.66□□□□□ -0.86
PTBP3-205ENST00000374257 SETBP1Q9Y6X0 1596 aa9.66□□□□□ -0.86
PTBP3-205ENST00000374257 MYO3BQ8WXR4 1341 aa9.66□□□□□ -0.86
PTBP3-205ENST00000374257 MED14O60244 1454 aa9.66□□□□□ -0.86
PTBP3-205ENST00000374257 USP17L8P0C7I0 530 aa9.66□□□□□ -0.86
PTBP3-205ENST00000374257 CALM1P0DP23 149 aa9.66□□□□□ -0.86
PTBP3-205ENST00000374257 CALM2P0DP24 149 aa9.66□□□□□ -0.86
PTBP3-205ENST00000374257 CALM3P0DP25 149 aa9.66□□□□□ -0.86
PTBP3-205ENST00000374257 TBC1D9BQ66K14 1250 aa9.66□□□□□ -0.86
PTBP3-205ENST00000374257 CHMP5Q9NZZ3 219 aa9.66□□□□□ -0.86
PTBP3-205ENST00000374257 IREB2P48200 963 aaKnown RBP9.66□□□□□ -0.86
PTBP3-205ENST00000374257 UPF3BQ9BZI7 483 aaKnown RBP9.66□□□□□ -0.86
PTBP3-205ENST00000374257 SAMM50Q9Y512 469 aa9.66□□□□□ -0.86
PTBP3-205ENST00000374257 MATR3P43243 847 aaKnown RBP eCLIP9.66□□□□□ -0.863e-8■■■■□ 23.9
PTBP3-205ENST00000374257 CD163L1Q9NR16 1453 aa9.66□□□□□ -0.86
PTBP3-205ENST00000374257 ZBED4O75132 1171 aa9.66□□□□□ -0.86
PTBP3-205ENST00000374257 HMGN5P82970 282 aaKnown RBP9.66□□□□□ -0.86
PTBP3-205ENST00000374257 TTC22Q5TAA0 569 aa9.66□□□□□ -0.86
PTBP3-205ENST00000374257 PODNQ7Z5L7 613 aa9.65□□□□□ -0.86
PTBP3-205ENST00000374257 NOD1Q9Y239 953 aa9.65□□□□□ -0.86
PTBP3-205ENST00000374257 IPO7O95373 1038 aaKnown RBP9.65□□□□□ -0.86
PTBP3-205ENST00000374257 METAP2P50579 478 aaKnown RBP eCLIP9.65□□□□□ -0.86
PTBP3-205ENST00000374257 IPO9Q96P70 1041 aaKnown RBP9.65□□□□□ -0.86
PTBP3-205ENST00000374257 ZYXQ15942 572 aaKnown RBP9.65□□□□□ -0.86
PTBP3-205ENST00000374257 APPBP2Q92624 585 aa9.65□□□□□ -0.86
PTBP3-205ENST00000374257 KINO60870 393 aaKnown RBP9.65□□□□□ -0.86
PTBP3-205ENST00000374257 BMP2KLQ5H9B9 411 aa9.65□□□□□ -0.86
PTBP3-205ENST00000374257 SH2B1Q9NRF2 756 aaPredicted RBP9.65□□□□□ -0.86
PTBP3-205ENST00000374257 SPDYE4A6NLX3 237 aa9.65□□□□□ -0.87
PTBP3-205ENST00000374257 TRIM21P19474 475 aaKnown RBP9.65□□□□□ -0.87
PTBP3-205ENST00000374257 CHRNA5P30532 468 aa9.65□□□□□ -0.87
PTBP3-205ENST00000374257 TGFBRAP1Q8WUH2 860 aa9.65□□□□□ -0.87
PTBP3-205ENST00000374257 BCAMP50895 628 aa9.65□□□□□ -0.87
PTBP3-205ENST00000374257 HLFQ16534 295 aa9.65□□□□□ -0.87
PTBP3-205ENST00000374257 OLFM4Q6UX06 510 aa9.65□□□□□ -0.87
PTBP3-205ENST00000374257 USP44Q9H0E7 712 aa9.65□□□□□ -0.87
PTBP3-205ENST00000374257 GPHNQ9NQX3 736 aaPredicted RBP9.65□□□□□ -0.87
PTBP3-205ENST00000374257 BSDC1Q9NW68 430 aaPredicted RBP9.65□□□□□ -0.87
PTBP3-205ENST00000374257 CNTNAP4Q9C0A0 1308 aa9.65□□□□□ -0.87
PTBP3-205ENST00000374257 SLC10A4Q96EP9 437 aa9.64□□□□□ -0.87
PTBP3-205ENST00000374257 C8orf76Q96K31 380 aa9.64□□□□□ -0.87
PTBP3-205ENST00000374257 GZF1Q9H116 711 aaPredicted RBP9.64□□□□□ -0.87
PTBP3-205ENST00000374257 ZBTB40Q9NUA8 1239 aa9.64□□□□□ -0.87
PTBP3-205ENST00000374257 RBM19Q9Y4C8 960 aaKnown RBP9.64□□□□□ -0.87
PTBP3-205ENST00000374257 CLRN2A0PK11 232 aa9.64□□□□□ -0.87
PTBP3-205ENST00000374257 ZBTB43O43298 467 aa9.64□□□□□ -0.87
PTBP3-205ENST00000374257 CCDC102BQ68D86 513 aa9.64□□□□□ -0.87
PTBP3-205ENST00000374257 ARMT1Q9H993 441 aa9.64□□□□□ -0.87
PTBP3-205ENST00000374257 SPDYE3A6NKU9 549 aa9.64□□□□□ -0.87
PTBP3-205ENST00000374257 SPC25Q9HBM1 224 aa9.64□□□□□ -0.87
PTBP3-205ENST00000374257 HELLSQ9NRZ9 838 aa9.64□□□□□ -0.87
PTBP3-205ENST00000374257 CEBPZQ03701 1054 aaKnown RBP9.64□□□□□ -0.87
PTBP3-205ENST00000374257 ZNF277Q9NRM2 450 aaPredicted RBP9.64□□□□□ -0.87
PTBP3-205ENST00000374257 EIF5P55010 431 aaKnown RBP9.64□□□□□ -0.87
PTBP3-205ENST00000374257 CKAP2LQ8IYA6 745 aa9.64□□□□□ -0.87
PTBP3-205ENST00000374257 NMIQ13287 307 aaPredicted RBP9.64□□□□□ -0.87
PTBP3-205ENST00000374257 STIM1Q13586 685 aa9.64□□□□□ -0.87
PTBP3-205ENST00000374257 DNAI2Q9GZS0 605 aa9.64□□□□□ -0.87
PTBP3-205ENST00000374257 RAD50Q92878 1312 aa9.64□□□□□ -0.87
PTBP3-205ENST00000374257 ZBTB7BO15156 539 aaPredicted RBP9.63□□□□□ -0.87
PTBP3-205ENST00000374257 PLSCR1O15162 318 aa9.63□□□□□ -0.87
PTBP3-205ENST00000374257 CCNA1P78396 465 aa9.63□□□□□ -0.87
PTBP3-205ENST00000374257 RRP36Q96EU6 259 aaKnown RBP9.63□□□□□ -0.87
PTBP3-205ENST00000374257 OFD1O75665 1012 aa9.63□□□□□ -0.87
PTBP3-205ENST00000374257 SLC1A4P43007 532 aa9.63□□□□□ -0.87
PTBP3-205ENST00000374257 ME1P48163 572 aa9.63□□□□□ -0.87
PTBP3-205ENST00000374257 SKOR2Q2VWA4 1001 aaPredicted RBP9.63□□□□□ -0.87
PTBP3-205ENST00000374257 GADL1Q6ZQY3 521 aa9.63□□□□□ -0.87
PTBP3-205ENST00000374257 PRM3Q9NNZ6 103 aa9.63□□□□□ -0.87
PTBP3-205ENST00000374257 RTL9Q8NET4 1388 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms