RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 BRI3BPQ8WY22 251 aa16.23■□□□□ 0.19
HDAC8-204ENST00000373560 ZBED3Q96IU2 234 aaPredicted RBP16.23■□□□□ 0.19
HDAC8-204ENST00000373560 MS4A4AQ96JQ5 239 aa16.23■□□□□ 0.19
HDAC8-204ENST00000373560 GSE1Q14687 1217 aa16.22■□□□□ 0.19
HDAC8-204ENST00000373560 TAF1CQ15572 869 aaPredicted RBP16.22■□□□□ 0.19
HDAC8-204ENST00000373560 HSP90AB3PQ58FF7 597 aa16.22■□□□□ 0.19
HDAC8-204ENST00000373560 FBXW7Q969H0 707 aa16.22■□□□□ 0.19
HDAC8-204ENST00000373560 HTATIP2Q9BUP3 242 aa16.22■□□□□ 0.19
HDAC8-204ENST00000373560 DEFB129Q9H1M3 183 aa16.22■□□□□ 0.19
HDAC8-204ENST00000373560 U2AF1L5P0DN76 240 aaPredicted RBP16.21■□□□□ 0.19
HDAC8-204ENST00000373560 U2AF1Q01081 240 aaKnown RBP eCLIP16.21■□□□□ 0.19
HDAC8-204ENST00000373560 OTUD7BQ6GQQ9 843 aa16.21■□□□□ 0.19
HDAC8-204ENST00000373560 FAM43AQ8N2R8 423 aa16.21■□□□□ 0.19
HDAC8-204ENST00000373560 NR2E3Q9Y5X4 410 aa16.21■□□□□ 0.19
HDAC8-204ENST00000373560 ATP5J2-PTCD1G3V325 749 aa16.2■□□□□ 0.18
HDAC8-204ENST00000373560 GJA8P48165 433 aa16.2■□□□□ 0.18
HDAC8-204ENST00000373560 PNISRQ8TF01 805 aaKnown RBP16.2■□□□□ 0.18
HDAC8-204ENST00000373560 PHF12Q96QT6 1004 aa16.2■□□□□ 0.18
HDAC8-204ENST00000373560 ELP3Q9H9T3 547 aa16.2■□□□□ 0.18
HDAC8-204ENST00000373560 FARP2O94887 1054 aaPredicted RBP16.19■□□□□ 0.18
HDAC8-204ENST00000373560 LACTBP83111 547 aaPredicted RBP16.19■□□□□ 0.18
HDAC8-204ENST00000373560 NBPF12Q5TAG4 269 aaPredicted RBP16.19■□□□□ 0.18
HDAC8-204ENST00000373560 PODNQ7Z5L7 613 aa16.19■□□□□ 0.18
HDAC8-204ENST00000373560 KIAA0825Q8IV33 1275 aa16.19■□□□□ 0.18
HDAC8-204ENST00000373560 OPTNQ96CV9 577 aa16.19■□□□□ 0.18
HDAC8-204ENST00000373560 IRS4O14654 1257 aaPredicted RBP16.18■□□□□ 0.18
HDAC8-204ENST00000373560 USP2O75604 605 aaPredicted RBP16.18■□□□□ 0.18
HDAC8-204ENST00000373560 CCL5P13501 91 aa16.18■□□□□ 0.18
HDAC8-204ENST00000373560 BCAMP50895 628 aa16.18■□□□□ 0.18
HDAC8-204ENST00000373560 SP7Q8TDD2 431 aaPredicted RBP16.18■□□□□ 0.18
HDAC8-204ENST00000373560 CCDC85AQ96PX6 553 aaPredicted RBP16.18■□□□□ 0.18
HDAC8-204ENST00000373560 GDF15Q99988 308 aa16.18■□□□□ 0.18
HDAC8-204ENST00000373560 ISCA1Q9BUE6 129 aa16.18■□□□□ 0.18
HDAC8-204ENST00000373560 GPR153Q6NV75 609 aa16.17■□□□□ 0.18
HDAC8-204ENST00000373560 TXNRD3Q86VQ6 643 aa16.17■□□□□ 0.18
HDAC8-204ENST00000373560 CDAN1Q8IWY9 1227 aa16.17■□□□□ 0.18
HDAC8-204ENST00000373560 OGFOD1Q8N543 542 aa16.17■□□□□ 0.18
HDAC8-204ENST00000373560 ZNF579Q8NAF0 562 aaKnown RBP16.17■□□□□ 0.18
HDAC8-204ENST00000373560 ZFYVE28Q9HCC9 887 aa16.17■□□□□ 0.18
HDAC8-204ENST00000373560 XDHP47989 1333 aa16.17■□□□□ 0.18
HDAC8-204ENST00000373560 PRUNE2Q8WUY3 3088 aa16.16■□□□□ 0.18
HDAC8-204ENST00000373560 MED23Q9ULK4 1368 aa16.16■□□□□ 0.18
HDAC8-204ENST00000373560 CCL15-CCL14A0A0B4J2E2 113 aa16.16■□□□□ 0.18
HDAC8-204ENST00000373560 CLRN2A0PK11 232 aa16.16■□□□□ 0.18
HDAC8-204ENST00000373560 GJB1P08034 283 aa16.16■□□□□ 0.18
HDAC8-204ENST00000373560 COL9A1P20849 921 aa16.16■□□□□ 0.18
HDAC8-204ENST00000373560 CCL15Q16663 113 aa16.16■□□□□ 0.18
HDAC8-204ENST00000373560 PPP1R12BO60237 982 aaPredicted RBP16.15■□□□□ 0.18
HDAC8-204ENST00000373560 EVI5O60447 810 aa16.15■□□□□ 0.18
HDAC8-204ENST00000373560 KLRK1P26718 216 aa16.15■□□□□ 0.18
HDAC8-204ENST00000373560 GUCD1Q96NT3 240 aa16.15■□□□□ 0.18
HDAC8-204ENST00000373560 MUC3AQ02505 3323 aa16.15■□□□□ 0.18
HDAC8-204ENST00000373560 ARAP2Q8WZ64 1704 aa16.14■□□□□ 0.17
HDAC8-204ENST00000373560 ARHGEF6Q15052 776 aa16.14■□□□□ 0.17
HDAC8-204ENST00000373560 KRT24Q2M2I5 525 aa16.14■□□□□ 0.17
HDAC8-204ENST00000373560 STRIP1Q5VSL9 837 aa16.14■□□□□ 0.17
HDAC8-204ENST00000373560 U2AF1L4Q8WU68 220 aaKnown RBP16.14■□□□□ 0.17
HDAC8-204ENST00000373560 TRIM47Q96LD4 638 aa16.14■□□□□ 0.17
HDAC8-204ENST00000373560 RNF208Q9H0X6 261 aa16.14■□□□□ 0.17
HDAC8-204ENST00000373560 ZMYND8Q9ULU4 1186 aaPredicted RBP16.14■□□□□ 0.17
HDAC8-204ENST00000373560 ZNF804BA4D1E1 1349 aa16.14■□□□□ 0.17
HDAC8-204ENST00000373560 MGAMO43451 1857 aa16.14■□□□□ 0.17
HDAC8-204ENST00000373560 OSBPP22059 807 aa16.13■□□□□ 0.17
HDAC8-204ENST00000373560 ATP2B4P23634 1241 aa16.13■□□□□ 0.17
HDAC8-204ENST00000373560 GRK4P32298 578 aa16.13■□□□□ 0.17
HDAC8-204ENST00000373560 ANKRD13DQ6ZTN6 518 aa16.13■□□□□ 0.17
HDAC8-204ENST00000373560 ANKRD13AQ8IZ07 590 aa16.13■□□□□ 0.17
HDAC8-204ENST00000373560 NKX2-3Q8TAU0 364 aa16.13■□□□□ 0.17
HDAC8-204ENST00000373560 JARID2Q92833 1246 aaPredicted RBP16.13■□□□□ 0.17
HDAC8-204ENST00000373560 UNC93B1Q9H1C4 597 aa16.13■□□□□ 0.17
HDAC8-204ENST00000373560 RIPOR2Q9Y4F9 1068 aa16.13■□□□□ 0.17
HDAC8-204ENST00000373560 RPTORQ8N122 1335 aa16.13■□□□□ 0.17
HDAC8-204ENST00000373560 MYO3BQ8WXR4 1341 aa16.13■□□□□ 0.17
HDAC8-204ENST00000373560 TLR2O60603 784 aa16.12■□□□□ 0.17
HDAC8-204ENST00000373560 PYGBP11216 843 aa16.12■□□□□ 0.17
HDAC8-204ENST00000373560 IREB2P48200 963 aaKnown RBP16.12■□□□□ 0.17
HDAC8-204ENST00000373560 LRIT3Q3SXY7 679 aa16.12■□□□□ 0.17
HDAC8-204ENST00000373560 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.12■□□□□ 0.17
HDAC8-204ENST00000373560 CERS5Q8N5B7 392 aa16.12■□□□□ 0.17
HDAC8-204ENST00000373560 DIS3LQ8TF46 1054 aaKnown RBP16.12■□□□□ 0.17
HDAC8-204ENST00000373560 SRRDQ9UH36 339 aa16.12■□□□□ 0.17
HDAC8-204ENST00000373560 TSPYL4Q9UJ04 414 aa16.12■□□□□ 0.17
HDAC8-204ENST00000373560 BMP8BP34820 402 aa16.11■□□□□ 0.17
HDAC8-204ENST00000373560 CHPF2Q9P2E5 772 aa16.11■□□□□ 0.17
HDAC8-204ENST00000373560 PPP2R3BQ9Y5P8 575 aa16.11■□□□□ 0.17
HDAC8-204ENST00000373560 LAMA2P24043 3122 aaKnown RBP16.1■□□□□ 0.17
HDAC8-204ENST00000373560 UNCXA6NJT0 531 aa16.1■□□□□ 0.17
HDAC8-204ENST00000373560 BTBD19C9JJ37 291 aa16.1■□□□□ 0.17
HDAC8-204ENST00000373560 SYN1P17600 705 aa16.1■□□□□ 0.17
HDAC8-204ENST00000373560 VGLL4Q14135 290 aa16.1■□□□□ 0.17
HDAC8-204ENST00000373560 C7orf61Q8IZ16 206 aa16.1■□□□□ 0.17
HDAC8-204ENST00000373560 PLBD2Q8NHP8 589 aa16.1■□□□□ 0.17
HDAC8-204ENST00000373560 CFAP53Q96M91 514 aa16.1■□□□□ 0.17
HDAC8-204ENST00000373560 VEZTQ9HBM0 779 aa16.1■□□□□ 0.17
HDAC8-204ENST00000373560 NUDCQ9Y266 331 aa16.1■□□□□ 0.17
HDAC8-204ENST00000373560 GTF2IP78347 998 aa16.09■□□□□ 0.17
HDAC8-204ENST00000373560 KIF22Q14807 665 aa16.09■□□□□ 0.17
HDAC8-204ENST00000373560 DLGAP5Q15398 846 aa16.09■□□□□ 0.17
HDAC8-204ENST00000373560 TTLL5Q6EMB2 1281 aa16.09■□□□□ 0.17
HDAC8-204ENST00000373560 RAET1EQ8TD07 263 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms