RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 LRP6O75581 1613 aa28.01■■■□□ 2.07
CDK9-201ENST00000373264 PRC1O43663 620 aa28■■■□□ 2.07
CDK9-201ENST00000373264 SLC9C2Q5TAH2 1124 aa28■■■□□ 2.07
CDK9-201ENST00000373264 ZSCAN16Q9H4T2 348 aaPredicted RBP28■■■□□ 2.07
CDK9-201ENST00000373264 IDH1O75874 414 aaKnown RBP28■■■□□ 2.07
CDK9-201ENST00000373264 MCM5P33992 734 aa28■■■□□ 2.07
CDK9-201ENST00000373264 GOLPH3LQ9H4A5 285 aa28■■■□□ 2.07
CDK9-201ENST00000373264 TAOK2Q9UL54 1235 aa28■■■□□ 2.07
CDK9-201ENST00000373264 EXOC5O00471 708 aa27.99■■■□□ 2.07
CDK9-201ENST00000373264 MB21D2Q8IYB1 491 aaPredicted RBP27.99■■■□□ 2.07
CDK9-201ENST00000373264 ZNF274Q96GC6 653 aaPredicted RBP27.99■■■□□ 2.07
CDK9-201ENST00000373264 CARMIL3Q8ND23 1372 aa27.99■■■□□ 2.07
CDK9-201ENST00000373264 NUP98P52948 1817 aa27.99■■■□□ 2.07
CDK9-201ENST00000373264 NAA16Q6N069 864 aaPredicted RBP27.99■■■□□ 2.07
CDK9-201ENST00000373264 ZFYP08048 801 aaPredicted RBP27.98■■■□□ 2.07
CDK9-201ENST00000373264 ACSBG1Q96GR2 724 aa27.98■■■□□ 2.07
CDK9-201ENST00000373264 HPS5Q9UPZ3 1129 aa27.98■■■□□ 2.07
CDK9-201ENST00000373264 KLF18A0A0U1RQI7 1052 aa27.98■■■□□ 2.07
CDK9-201ENST00000373264 FAM200AQ8TCP9 573 aa27.98■■■□□ 2.07
CDK9-201ENST00000373264 CBX8Q9HC52 389 aa27.98■■■□□ 2.07
CDK9-201ENST00000373264 INCENPQ9NQS7 918 aa27.98■■■□□ 2.07
CDK9-201ENST00000373264 WWC3Q9ULE0 1092 aa27.98■■■□□ 2.07
CDK9-201ENST00000373264 HMGN5P82970 282 aaKnown RBP27.97■■■□□ 2.07
CDK9-201ENST00000373264 CCDC102BQ68D86 513 aa27.97■■■□□ 2.07
CDK9-201ENST00000373264 PDE8BO95263 885 aa27.97■■■□□ 2.07
CDK9-201ENST00000373264 DDX19AQ9NUU7 478 aaKnown RBP27.97■■■□□ 2.07
CDK9-201ENST00000373264 CTNNA3Q9UI47 895 aa27.97■■■□□ 2.07
CDK9-201ENST00000373264 ADD2P35612 726 aa27.96■■■□□ 2.07
CDK9-201ENST00000373264 ERCC4Q92889 916 aaPredicted RBP27.96■■■□□ 2.07
CDK9-201ENST00000373264 DNAJC25Q9H1X3 360 aa27.96■■■□□ 2.07
CDK9-201ENST00000373264 CFAP45Q9UL16 551 aa27.96■■■□□ 2.07
CDK9-201ENST00000373264 MYH7P12883 1935 aa27.96■■■□□ 2.07
CDK9-201ENST00000373264 KIAA2012Q0VF49 1180 aa27.96■■■□□ 2.07
CDK9-201ENST00000373264 TBC1D10CQ8IV04 446 aa27.96■■■□□ 2.07
CDK9-201ENST00000373264 GOLGA8BA8MQT2 603 aa27.95■■■□□ 2.07
CDK9-201ENST00000373264 ZNF213O14771 459 aa27.95■■■□□ 2.07
CDK9-201ENST00000373264 RXRAP19793 462 aa27.95■■■□□ 2.07
CDK9-201ENST00000373264 RBM43Q6ZSC3 357 aaKnown RBP27.95■■■□□ 2.07
CDK9-201ENST00000373264 SEC31BQ9NQW1 1179 aa27.95■■■□□ 2.07
CDK9-201ENST00000373264 MYH3P11055 1940 aa27.95■■■□□ 2.07
CDK9-201ENST00000373264 MYH15Q9Y2K3 1946 aa27.95■■■□□ 2.07
CDK9-201ENST00000373264 PDE8AO60658 829 aa27.95■■■□□ 2.06
CDK9-201ENST00000373264 CCAR1Q8IX12 1150 aaKnown RBP27.95■■■□□ 2.06
CDK9-201ENST00000373264 SENP2Q9HC62 589 aa27.95■■■□□ 2.06
CDK9-201ENST00000373264 ZNF532Q9HCE3 1301 aa27.94■■■□□ 2.06
CDK9-201ENST00000373264 SUSD4Q5VX71 490 aa27.94■■■□□ 2.06
CDK9-201ENST00000373264 TICAM2Q86XR7 235 aa27.94■■■□□ 2.06
CDK9-201ENST00000373264 KCNF1Q9H3M0 494 aa27.94■■■□□ 2.06
CDK9-201ENST00000373264 APPP05067 770 aa27.94■■■□□ 2.06
CDK9-201ENST00000373264 RCOR1Q9UKL0 485 aa27.94■■■□□ 2.06
CDK9-201ENST00000373264 ADAMTS2O95450 1211 aa27.93■■■□□ 2.06
CDK9-201ENST00000373264 POLR3DP05423 398 aaPredicted RBP27.93■■■□□ 2.06
CDK9-201ENST00000373264 LRRFIP1Q32MZ4 808 aaKnown RBP27.93■■■□□ 2.06
CDK9-201ENST00000373264 ZNF34Q8IZ26 560 aa27.93■■■□□ 2.06
CDK9-201ENST00000373264 ANKRD36CQ5JPF3 1778 aa27.93■■■□□ 2.06
CDK9-201ENST00000373264 EVCP57679 992 aa27.93■■■□□ 2.06
CDK9-201ENST00000373264 CYB5R4Q7L1T6 521 aa27.93■■■□□ 2.06
CDK9-201ENST00000373264 NCOA7Q8NI08 942 aa27.92■■■□□ 2.06
CDK9-201ENST00000373264 RALYLQ86SE5 291 aaKnown RBP27.92■■■□□ 2.06
CDK9-201ENST00000373264 AIFM3Q96NN9 605 aa27.91■■■□□ 2.06
CDK9-201ENST00000373264 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.91■■■□□ 2.062e-6■■□□□ 13.9
CDK9-201ENST00000373264 PDE6AP16499 860 aa27.91■■■□□ 2.06
CDK9-201ENST00000373264 IL6STP40189 918 aaPredicted RBP27.91■■■□□ 2.06
CDK9-201ENST00000373264 SNW1Q13573 536 aaKnown RBP27.91■■■□□ 2.06
CDK9-201ENST00000373264 INTS5Q6P9B9 1019 aaKnown RBP27.91■■■□□ 2.06
CDK9-201ENST00000373264 PYCARDQ9ULZ3 195 aa27.9■■■□□ 2.06
CDK9-201ENST00000373264 ME1P48163 572 aa27.9■■■□□ 2.06
CDK9-201ENST00000373264 SASS6Q6UVJ0 657 aa27.9■■■□□ 2.06
CDK9-201ENST00000373264 FBXL16Q8N461 479 aa27.89■■■□□ 2.06
CDK9-201ENST00000373264 ORC3Q9UBD5 711 aaPredicted RBP27.89■■■□□ 2.06
CDK9-201ENST00000373264 CLIC4Q9Y696 253 aa27.89■■■□□ 2.06
CDK9-201ENST00000373264 DOT1LQ8TEK3 1739 aa27.89■■■□□ 2.05
CDK9-201ENST00000373264 COL16A1Q07092 1604 aaPredicted RBP27.89■■■□□ 2.05
CDK9-201ENST00000373264 TPM2P07951 284 aa27.89■■■□□ 2.05
CDK9-201ENST00000373264 C11orf57Q6ZUT1 292 aaPredicted RBP27.89■■■□□ 2.05
CDK9-201ENST00000373264 CCDC144CPQ8IYA2 1237 aa27.89■■■□□ 2.05
CDK9-201ENST00000373264 FBXW7Q969H0 707 aa27.89■■■□□ 2.05
CDK9-201ENST00000373264 TCRBV5S4A2TA0A5A2 114 aa27.88■■■□□ 2.05
CDK9-201ENST00000373264 B4E1Z4 1266 aa27.88■■■□□ 2.05
CDK9-201ENST00000373264 KIF28PB7ZC32 967 aa27.88■■■□□ 2.05
CDK9-201ENST00000373264 ZNF165P49910 485 aa27.88■■■□□ 2.05
CDK9-201ENST00000373264 PIBF1Q8WXW3 757 aa27.88■■■□□ 2.05
CDK9-201ENST00000373264 ERVV-1B6SEH8 477 aa27.87■■■□□ 2.05
CDK9-201ENST00000373264 EIF5P55010 431 aaKnown RBP27.87■■■□□ 2.05
CDK9-201ENST00000373264 NRBP1Q9UHY1 535 aa27.87■■■□□ 2.05
CDK9-201ENST00000373264 KIF3AQ9Y496 699 aa27.87■■■□□ 2.05
CDK9-201ENST00000373264 COL14A1Q05707 1796 aaKnown RBP27.87■■■□□ 2.05
CDK9-201ENST00000373264 FGFR2P21802 821 aa27.87■■■□□ 2.05
CDK9-201ENST00000373264 CRKLP46109 303 aaKnown RBP27.87■■■□□ 2.05
CDK9-201ENST00000373264 RASGRF1Q13972 1273 aa27.87■■■□□ 2.05
CDK9-201ENST00000373264 NOLC1Q14978 699 aaKnown RBP eCLIP27.87■■■□□ 2.05
CDK9-201ENST00000373264 C8orf76Q96K31 380 aa27.87■■■□□ 2.05
CDK9-201ENST00000373264 PCDHA7Q9UN72 937 aa27.87■■■□□ 2.05
CDK9-201ENST00000373264 TACC3Q9Y6A5 838 aa27.87■■■□□ 2.05
CDK9-201ENST00000373264 ABCC12Q96J65 1359 aa27.87■■■□□ 2.05
CDK9-201ENST00000373264 UBE2Q2LH0YL09 131 aa27.86■■■□□ 2.05
CDK9-201ENST00000373264 ARID4AP29374 1257 aaPredicted RBP27.86■■■□□ 2.05
CDK9-201ENST00000373264 ATP6V1AP38606 617 aa27.86■■■□□ 2.05
CDK9-201ENST00000373264 PUM3Q15397 648 aaKnown RBP27.86■■■□□ 2.05
CDK9-201ENST00000373264 NEDD4P46934 1319 aa27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms