RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 FEZ2Q9UHY8 353 aaPredicted RBP6.33□□□□□ -1.4
ATG4A-204ENST00000372246 DLC1Q96QB1 1528 aa6.33□□□□□ -1.4
ATG4A-204ENST00000372246 SRCAPQ6ZRS2 3230 aa6.33□□□□□ -1.4
ATG4A-204ENST00000372246 GLRX3O76003 335 aaKnown RBP6.33□□□□□ -1.4
ATG4A-204ENST00000372246 CYP2C19P33261 490 aa6.33□□□□□ -1.4
ATG4A-204ENST00000372246 NDUFA8P51970 172 aa6.33□□□□□ -1.4
ATG4A-204ENST00000372246 GNL2Q13823 731 aaKnown RBP6.33□□□□□ -1.4
ATG4A-204ENST00000372246 DDX46Q7L014 1031 aaKnown RBP6.33□□□□□ -1.4
ATG4A-204ENST00000372246 ERO1AQ96HE7 468 aa6.33□□□□□ -1.4
ATG4A-204ENST00000372246 KAZALD1Q96I82 304 aa6.33□□□□□ -1.4
ATG4A-204ENST00000372246 SUCLG2Q96I99 432 aa6.33□□□□□ -1.4
ATG4A-204ENST00000372246 SCAND2PQ9GZW5 306 aaPredicted RBP6.33□□□□□ -1.4
ATG4A-204ENST00000372246 SH2B1Q9NRF2 756 aaPredicted RBP6.33□□□□□ -1.4
ATG4A-204ENST00000372246 SLC52A1Q9NWF4 448 aa6.33□□□□□ -1.4
ATG4A-204ENST00000372246 C9orf78Q9NZ63 289 aaPredicted RBP6.33□□□□□ -1.4
ATG4A-204ENST00000372246 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.33□□□□□ -1.4
ATG4A-204ENST00000372246 MAP3K2Q9Y2U5 619 aa6.33□□□□□ -1.4
ATG4A-204ENST00000372246 HECW2Q9P2P5 1572 aa6.32□□□□□ -1.4
ATG4A-204ENST00000372246 PEAK1Q9H792 1746 aa6.32□□□□□ -1.4
ATG4A-204ENST00000372246 GNAT3A8MTJ3 354 aa6.32□□□□□ -1.4
ATG4A-204ENST00000372246 H2AFXP16104 143 aaPredicted RBP6.32□□□□□ -1.4
ATG4A-204ENST00000372246 PTPREP23469 700 aa6.32□□□□□ -1.4
ATG4A-204ENST00000372246 GRIPAP1Q4V328 841 aa6.32□□□□□ -1.4
ATG4A-204ENST00000372246 EPHA10Q5JZY3 1008 aa6.32□□□□□ -1.4
ATG4A-204ENST00000372246 TTLL5Q6EMB2 1281 aa6.32□□□□□ -1.4
ATG4A-204ENST00000372246 TYW1BQ6NUM6 668 aa6.32□□□□□ -1.4
ATG4A-204ENST00000372246 RBM43Q6ZSC3 357 aaKnown RBP6.32□□□□□ -1.4
ATG4A-204ENST00000372246 DNAAF4Q8WXU2 420 aa6.32□□□□□ -1.4
ATG4A-204ENST00000372246 DDX12PQ92771 950 aa6.32□□□□□ -1.4
ATG4A-204ENST00000372246 RNF166Q96A37 237 aaPredicted RBP6.32□□□□□ -1.4
ATG4A-204ENST00000372246 SDF4Q9BRK5 362 aa6.32□□□□□ -1.4
ATG4A-204ENST00000372246 UTP14AQ9BVJ6 771 aaKnown RBP6.32□□□□□ -1.4
ATG4A-204ENST00000372246 BICC1Q9H694 974 aaKnown RBP6.32□□□□□ -1.4
ATG4A-204ENST00000372246 CLIC4Q9Y696 253 aa6.32□□□□□ -1.4
ATG4A-204ENST00000372246 AATKQ6ZMQ8 1374 aa6.32□□□□□ -1.4
ATG4A-204ENST00000372246 NPHP4O75161 1426 aaPredicted RBP6.32□□□□□ -1.4
ATG4A-204ENST00000372246 SPDYE16A6NNV3 312 aaPredicted RBP6.32□□□□□ -1.4
ATG4A-204ENST00000372246 UBE2Q2LH0YL09 131 aa6.32□□□□□ -1.4
ATG4A-204ENST00000372246 N4BP1O75113 896 aaKnown RBP6.32□□□□□ -1.4
ATG4A-204ENST00000372246 CYP21A2P08686 494 aa6.32□□□□□ -1.4
ATG4A-204ENST00000372246 MARCKSP29966 332 aaPredicted RBP6.32□□□□□ -1.4
ATG4A-204ENST00000372246 SPECC1Q5M775 1068 aa6.32□□□□□ -1.4
ATG4A-204ENST00000372246 CNPY4Q8N129 248 aa6.32□□□□□ -1.4
ATG4A-204ENST00000372246 LRRC59Q96AG4 307 aaKnown RBP6.32□□□□□ -1.4
ATG4A-204ENST00000372246 ZSCAN31Q96LW9 406 aaPredicted RBP6.32□□□□□ -1.4
ATG4A-204ENST00000372246 WDR24Q96S15 920 aa6.32□□□□□ -1.4
ATG4A-204ENST00000372246 HINFPQ9BQA5 517 aa6.32□□□□□ -1.4
ATG4A-204ENST00000372246 DESI2Q9BSY9 194 aa6.32□□□□□ -1.4
ATG4A-204ENST00000372246 VPS9D1Q9Y2B5 631 aa6.32□□□□□ -1.4
ATG4A-204ENST00000372246 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.32□□□□□ -1.4
ATG4A-204ENST00000372246 PTPDC1A2A3K4 754 aa6.31□□□□□ -1.4
ATG4A-204ENST00000372246 H3BQF6 201 aa6.31□□□□□ -1.4
ATG4A-204ENST00000372246 COBLO75128 1261 aa6.31□□□□□ -1.4
ATG4A-204ENST00000372246 PHACTR2O75167 634 aa6.31□□□□□ -1.4
ATG4A-204ENST00000372246 OAS2P29728 719 aaKnown RBP6.31□□□□□ -1.4
ATG4A-204ENST00000372246 TEX35Q5T0J7 233 aa6.31□□□□□ -1.4
ATG4A-204ENST00000372246 AIFM3Q96NN9 605 aa6.31□□□□□ -1.4
ATG4A-204ENST00000372246 ZBED2Q9BTP6 218 aa6.31□□□□□ -1.4
ATG4A-204ENST00000372246 SLC4A5Q9BY07 1137 aa6.31□□□□□ -1.4
ATG4A-204ENST00000372246 RSPH14Q9UHP6 348 aa6.31□□□□□ -1.4
ATG4A-204ENST00000372246 DENND2AQ9ULE3 1009 aa6.31□□□□□ -1.4
ATG4A-204ENST00000372246 PCDHA7Q9UN72 937 aa6.31□□□□□ -1.4
ATG4A-204ENST00000372246 ELP1O95163 1332 aa6.31□□□□□ -1.4
ATG4A-204ENST00000372246 ROBO2Q9HCK4 1378 aa6.31□□□□□ -1.4
ATG4A-204ENST00000372246 CCDC66A2RUB6 948 aa6.31□□□□□ -1.4
ATG4A-204ENST00000372246 TULP2O00295 520 aa6.31□□□□□ -1.4
ATG4A-204ENST00000372246 TAF5LO75529 589 aa6.31□□□□□ -1.4
ATG4A-204ENST00000372246 MYL6BP14649 208 aa6.31□□□□□ -1.4
ATG4A-204ENST00000372246 RXRAP19793 462 aa6.31□□□□□ -1.4
ATG4A-204ENST00000372246 MMP14P50281 582 aa6.31□□□□□ -1.4
ATG4A-204ENST00000372246 HAND2P61296 217 aa6.31□□□□□ -1.4
ATG4A-204ENST00000372246 MTF1Q14872 753 aa6.31□□□□□ -1.4
ATG4A-204ENST00000372246 KARSQ15046 597 aaKnown RBP6.31□□□□□ -1.4
ATG4A-204ENST00000372246 STX1AQ16623 288 aa6.31□□□□□ -1.4
ATG4A-204ENST00000372246 NBPF6Q5VWK0 638 aa6.31□□□□□ -1.4
ATG4A-204ENST00000372246 NKX2-3Q8TAU0 364 aa6.31□□□□□ -1.4
ATG4A-204ENST00000372246 KCNV2Q8TDN2 545 aa6.31□□□□□ -1.4
ATG4A-204ENST00000372246 MRFAP1L1Q96HT8 127 aa6.31□□□□□ -1.4
ATG4A-204ENST00000372246 NBPF4Q96M43 638 aa6.31□□□□□ -1.4
ATG4A-204ENST00000372246 RABEP2Q9H5N1 569 aa6.31□□□□□ -1.4
ATG4A-204ENST00000372246 ORC3Q9UBD5 711 aaPredicted RBP6.31□□□□□ -1.4
ATG4A-204ENST00000372246 FOXN1O15353 648 aa6.3□□□□□ -1.4
ATG4A-204ENST00000372246 KINO60870 393 aaKnown RBP6.3□□□□□ -1.4
ATG4A-204ENST00000372246 TBC1D8O95759 1140 aa6.3□□□□□ -1.4
ATG4A-204ENST00000372246 COL9A1P20849 921 aa6.3□□□□□ -1.4
ATG4A-204ENST00000372246 LMAN1P49257 510 aa6.3□□□□□ -1.4
ATG4A-204ENST00000372246 ADKP55263 362 aaKnown RBP6.3□□□□□ -1.4
ATG4A-204ENST00000372246 EVCP57679 992 aa6.3□□□□□ -1.4
ATG4A-204ENST00000372246 SYCP1Q15431 976 aa6.3□□□□□ -1.4
ATG4A-204ENST00000372246 CCDC93Q567U6 631 aa6.3□□□□□ -1.4
ATG4A-204ENST00000372246 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.3□□□□□ -1.4
ATG4A-204ENST00000372246 ENGASEQ8NFI3 743 aa6.3□□□□□ -1.4
ATG4A-204ENST00000372246 RUFY2Q8WXA3 655 aa6.3□□□□□ -1.4
ATG4A-204ENST00000372246 EVI5LQ96CN4 794 aa6.3□□□□□ -1.4
ATG4A-204ENST00000372246 NEK1Q96PY6 1258 aa6.3□□□□□ -1.4
ATG4A-204ENST00000372246 EPAS1Q99814 870 aa6.3□□□□□ -1.4
ATG4A-204ENST00000372246 TOMM22Q9NS69 142 aa6.3□□□□□ -1.4
ATG4A-204ENST00000372246 KCNG1Q9UIX4 513 aa6.3□□□□□ -1.4
ATG4A-204ENST00000372246 AOX1Q06278 1338 aa6.3□□□□□ -1.4
ATG4A-204ENST00000372246 ABL1P00519 1130 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms