RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 ZNF277Q9NRM2 450 aaPredicted RBP19.25■□□□□ 0.67
TMEM53-204ENST00000372243 IQSEC3Q9UPP2 1182 aaPredicted RBP19.25■□□□□ 0.67
TMEM53-204ENST00000372243 COL1A1P02452 1464 aaPredicted RBP19.25■□□□□ 0.67
TMEM53-204ENST00000372243 AK9Q5TCS8 1911 aa19.25■□□□□ 0.67
TMEM53-204ENST00000372243 CYP2E1P05181 493 aaPredicted RBP19.24■□□□□ 0.67
TMEM53-204ENST00000372243 YBX3P16989 372 aaKnown RBP eCLIP19.24■□□□□ 0.67
TMEM53-204ENST00000372243 LARGE2Q8N3Y3 721 aa19.24■□□□□ 0.67
TMEM53-204ENST00000372243 FAM205AQ6ZU69 1335 aa19.24■□□□□ 0.67
TMEM53-204ENST00000372243 SALL1Q9NSC2 1324 aa19.24■□□□□ 0.67
TMEM53-204ENST00000372243 GOLIM4O00461 696 aa19.23■□□□□ 0.67
TMEM53-204ENST00000372243 ECE2O60344 883 aa19.23■□□□□ 0.67
TMEM53-204ENST00000372243 IGSF3O75054 1194 aa19.23■□□□□ 0.67
TMEM53-204ENST00000372243 MAP4K4O95819 1239 aaPredicted RBP19.23■□□□□ 0.67
TMEM53-204ENST00000372243 DOK7Q18PE1 504 aa19.23■□□□□ 0.67
TMEM53-204ENST00000372243 KBTBD3Q8NAB2 608 aa19.23■□□□□ 0.67
TMEM53-204ENST00000372243 WDR66Q8TBY9 1149 aa19.23■□□□□ 0.67
TMEM53-204ENST00000372243 RILPL2Q969X0 211 aa19.23■□□□□ 0.67
TMEM53-204ENST00000372243 NDUFB9Q9Y6M9 179 aa19.23■□□□□ 0.67
TMEM53-204ENST00000372243 CHD4Q14839 1912 aa19.23■□□□□ 0.67
TMEM53-204ENST00000372243 ARHGAP27Q6ZUM4 889 aa19.23■□□□□ 0.67
TMEM53-204ENST00000372243 ANTXR1Q9H6X2 564 aa19.23■□□□□ 0.67
TMEM53-204ENST00000372243 DBNDD1Q9H9R9 158 aa19.23■□□□□ 0.67
TMEM53-204ENST00000372243 RFX7Q2KHR2 1363 aa19.22■□□□□ 0.67
TMEM53-204ENST00000372243 DOCK2Q92608 1830 aa19.22■□□□□ 0.67
TMEM53-204ENST00000372243 ZGPATQ8N5A5 531 aaKnown RBP19.22■□□□□ 0.67
TMEM53-204ENST00000372243 EDC3Q96F86 508 aaKnown RBP19.22■□□□□ 0.67
TMEM53-204ENST00000372243 COL4A5P29400 1685 aa19.21■□□□□ 0.67
TMEM53-204ENST00000372243 PSME4Q14997 1843 aa19.21■□□□□ 0.67
TMEM53-204ENST00000372243 RASSF7Q02833 373 aa19.21■□□□□ 0.67
TMEM53-204ENST00000372243 PELP1Q8IZL8 1130 aaKnown RBP19.21■□□□□ 0.67
TMEM53-204ENST00000372243 TBC1D22AQ8WUA7 517 aa19.21■□□□□ 0.67
TMEM53-204ENST00000372243 GRIN3BO60391 1043 aa19.2■□□□□ 0.66
TMEM53-204ENST00000372243 STRIP1Q5VSL9 837 aa19.2■□□□□ 0.66
TMEM53-204ENST00000372243 NIM1KQ8IY84 436 aa19.2■□□□□ 0.66
TMEM53-204ENST00000372243 JDP2Q8WYK2 163 aa19.2■□□□□ 0.66
TMEM53-204ENST00000372243 ZNRF3Q9ULT6 936 aa19.2■□□□□ 0.66
TMEM53-204ENST00000372243 DICER1Q9UPY3 1922 aaKnown RBP19.2■□□□□ 0.66
TMEM53-204ENST00000372243 SBF1O95248 1867 aa19.2■□□□□ 0.66
TMEM53-204ENST00000372243 LMNB1P20700 586 aa19.19■□□□□ 0.66
TMEM53-204ENST00000372243 FKBP1AP62942 108 aaKnown RBP19.19■□□□□ 0.66
TMEM53-204ENST00000372243 GTF2IP78347 998 aa19.19■□□□□ 0.66
TMEM53-204ENST00000372243 CHAF1AQ13111 956 aaPredicted RBP19.19■□□□□ 0.66
TMEM53-204ENST00000372243 GPR162Q16538 588 aa19.19■□□□□ 0.66
TMEM53-204ENST00000372243 LRRFIP1Q32MZ4 808 aaKnown RBP19.19■□□□□ 0.66
TMEM53-204ENST00000372243 TTLL5Q6EMB2 1281 aa19.19■□□□□ 0.66
TMEM53-204ENST00000372243 TMED8Q6PL24 325 aaPredicted RBP19.19■□□□□ 0.66
TMEM53-204ENST00000372243 FSD1Q9BTV5 496 aa19.19■□□□□ 0.66
TMEM53-204ENST00000372243 PIH1D3Q9NQM4 214 aaKnown RBP19.19■□□□□ 0.66
TMEM53-204ENST00000372243 SCN9AQ15858 1988 aa19.19■□□□□ 0.66
TMEM53-204ENST00000372243 CCDC88AQ3V6T2 1871 aa19.19■□□□□ 0.66
TMEM53-204ENST00000372243 ZNF646O15015 1829 aaPredicted RBP19.19■□□□□ 0.66
TMEM53-204ENST00000372243 YDJCA8MPS7 323 aa19.19■□□□□ 0.66
TMEM53-204ENST00000372243 HIP1O00291 1037 aa19.19■□□□□ 0.66
TMEM53-204ENST00000372243 CDC45O75419 566 aa19.19■□□□□ 0.66
TMEM53-204ENST00000372243 PRELPP51888 382 aa19.19■□□□□ 0.66
TMEM53-204ENST00000372243 SPTY2D1Q68D10 685 aaPredicted RBP19.19■□□□□ 0.66
TMEM53-204ENST00000372243 TBC1D9Q6ZT07 1266 aa19.19■□□□□ 0.66
TMEM53-204ENST00000372243 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.19■□□□□ 0.66
TMEM53-204ENST00000372243 MYH7P12883 1935 aa19.18■□□□□ 0.66
TMEM53-204ENST00000372243 USP17L3A6NCW0 530 aa19.18■□□□□ 0.66
TMEM53-204ENST00000372243 USP17L4A6NCW7 530 aa19.18■□□□□ 0.66
TMEM53-204ENST00000372243 MAP3K12Q12852 859 aa19.18■□□□□ 0.66
TMEM53-204ENST00000372243 ZSCAN25Q6NSZ9 544 aa19.18■□□□□ 0.66
TMEM53-204ENST00000372243 USP17L1Q7RTZ2 530 aa19.18■□□□□ 0.66
TMEM53-204ENST00000372243 ABCF2Q9UG63 623 aa19.18■□□□□ 0.66
TMEM53-204ENST00000372243 SUGT1Q9Y2Z0 365 aa19.18■□□□□ 0.66
TMEM53-204ENST00000372243 MYO5AQ9Y4I1 1855 aaKnown RBP19.17■□□□□ 0.66
TMEM53-204ENST00000372243 ZFYP08048 801 aaPredicted RBP19.17■□□□□ 0.66
TMEM53-204ENST00000372243 LRP2BPQ9P2M1 347 aa19.17■□□□□ 0.66
TMEM53-204ENST00000372243 IDH1O75874 414 aaKnown RBP19.16■□□□□ 0.66
TMEM53-204ENST00000372243 MFSD14BQ5SR56 506 aa19.16■□□□□ 0.66
TMEM53-204ENST00000372243 DACT2Q5SW24 774 aa19.16■□□□□ 0.66
TMEM53-204ENST00000372243 ERICH6Q7L0X2 663 aa19.16■□□□□ 0.66
TMEM53-204ENST00000372243 KCNQ5Q9NR82 932 aa19.16■□□□□ 0.66
TMEM53-204ENST00000372243 MAST2Q6P0Q8 1798 aa19.15■□□□□ 0.66
TMEM53-204ENST00000372243 FZD9O00144 591 aa19.15■□□□□ 0.66
TMEM53-204ENST00000372243 CHMLP26374 656 aa19.15■□□□□ 0.66
TMEM53-204ENST00000372243 CASC1Q6TDU7 716 aa19.15■□□□□ 0.66
TMEM53-204ENST00000372243 JAG2Q9Y219 1238 aa19.15■□□□□ 0.66
TMEM53-204ENST00000372243 RNF113AO15541 343 aaKnown RBP19.15■□□□□ 0.66
TMEM53-204ENST00000372243 LDHBP07195 334 aaKnown RBP19.15■□□□□ 0.66
TMEM53-204ENST00000372243 ADD2P35612 726 aa19.15■□□□□ 0.66
TMEM53-204ENST00000372243 UBE3CQ15386 1083 aa19.15■□□□□ 0.66
TMEM53-204ENST00000372243 MYO3BQ8WXR4 1341 aa19.14■□□□□ 0.65
TMEM53-204ENST00000372243 VIL1P09327 827 aaKnown RBP19.14■□□□□ 0.65
TMEM53-204ENST00000372243 PRDX5P30044 214 aa19.14■□□□□ 0.65
TMEM53-204ENST00000372243 C8orf34Q49A92 452 aa19.14■□□□□ 0.65
TMEM53-204ENST00000372243 SLC9C2Q5TAH2 1124 aa19.14■□□□□ 0.65
TMEM53-204ENST00000372243 DIAPH3Q9NSV4 1193 aa19.14■□□□□ 0.65
TMEM53-204ENST00000372243 RAI14Q9P0K7 980 aa19.14■□□□□ 0.65
TMEM53-204ENST00000372243 PDE6AP16499 860 aa19.13■□□□□ 0.65
TMEM53-204ENST00000372243 CXCL9Q07325 125 aa19.13■□□□□ 0.65
TMEM53-204ENST00000372243 CERS5Q8N5B7 392 aa19.13■□□□□ 0.65
TMEM53-204ENST00000372243 FBXW7Q969H0 707 aa19.13■□□□□ 0.65
TMEM53-204ENST00000372243 NSUN4Q96CB9 384 aaKnown RBP19.13■□□□□ 0.65
TMEM53-204ENST00000372243 TCRBV5S4A2TA0A5A2 114 aa19.12■□□□□ 0.65
TMEM53-204ENST00000372243 TNIP1Q15025 636 aa19.12■□□□□ 0.65
TMEM53-204ENST00000372243 CIAPIN1Q6FI81 312 aa19.12■□□□□ 0.65
TMEM53-204ENST00000372243 RUFY2Q8WXA3 655 aa19.12■□□□□ 0.65
TMEM53-204ENST00000372243 MAST3O60307 1309 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms