RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 KANK3Q6NY19 840 aa14.12□□□□□ -0.15
PTPRK-203ENST00000368207 CCDC148Q8NFR7 591 aa14.12□□□□□ -0.15
PTPRK-203ENST00000368207 FAM200AQ8TCP9 573 aa14.12□□□□□ -0.15
PTPRK-203ENST00000368207 VEZTQ9HBM0 779 aa14.12□□□□□ -0.15
PTPRK-203ENST00000368207 ERBB3P21860 1342 aa14.12□□□□□ -0.15
PTPRK-203ENST00000368207 URI1O94763 535 aaPredicted RBP14.11□□□□□ -0.15
PTPRK-203ENST00000368207 TMX1Q9H3N1 280 aa14.11□□□□□ -0.15
PTPRK-203ENST00000368207 SAP30BPQ9UHR5 308 aaKnown RBP14.11□□□□□ -0.15
PTPRK-203ENST00000368207 ADCY10Q96PN6 1610 aa14.11□□□□□ -0.15
PTPRK-203ENST00000368207 ATP5JP18859 108 aa14.11□□□□□ -0.15
PTPRK-203ENST00000368207 IBSPP21815 317 aaPredicted RBP14.11□□□□□ -0.15
PTPRK-203ENST00000368207 CCDC178Q5BJE1 867 aa14.11□□□□□ -0.15
PTPRK-203ENST00000368207 UBXN4Q92575 508 aa14.11□□□□□ -0.15
PTPRK-203ENST00000368207 ZSCAN12O43309 604 aa14.11□□□□□ -0.15
PTPRK-203ENST00000368207 AMPD3Q01432 767 aa14.11□□□□□ -0.15
PTPRK-203ENST00000368207 OTUD7BQ6GQQ9 843 aa14.11□□□□□ -0.15
PTPRK-203ENST00000368207 ARHGAP31Q2M1Z3 1444 aa14.11□□□□□ -0.15
PTPRK-203ENST00000368207 CAVIN2O95810 425 aa14.11□□□□□ -0.15
PTPRK-203ENST00000368207 CDR1P51861 262 aa14.11□□□□□ -0.15
PTPRK-203ENST00000368207 UVSSAQ2YD98 709 aa14.11□□□□□ -0.15
PTPRK-203ENST00000368207 TXLNBQ8N3L3 684 aa14.11□□□□□ -0.15
PTPRK-203ENST00000368207 DHX58Q96C10 678 aa14.11□□□□□ -0.15
PTPRK-203ENST00000368207 PLCG2P16885 1265 aa14.1□□□□□ -0.15
PTPRK-203ENST00000368207 HSPA4P34932 840 aa14.1□□□□□ -0.15
PTPRK-203ENST00000368207 LRRC24Q50LG9 513 aa14.1□□□□□ -0.15
PTPRK-203ENST00000368207 AXDND1Q5T1B0 1012 aaPredicted RBP14.1□□□□□ -0.15
PTPRK-203ENST00000368207 RBM26Q5T8P6 1007 aaKnown RBP14.1□□□□□ -0.15
PTPRK-203ENST00000368207 TCERG1LQ5VWI1 586 aa14.1□□□□□ -0.15
PTPRK-203ENST00000368207 SEC62Q99442 399 aaKnown RBP14.1□□□□□ -0.15
PTPRK-203ENST00000368207 SAMM50Q9Y512 469 aa14.1□□□□□ -0.15
PTPRK-203ENST00000368207 TNNT1P13805 278 aa14.1□□□□□ -0.15
PTPRK-203ENST00000368207 SPA17Q15506 151 aa14.1□□□□□ -0.15
PTPRK-203ENST00000368207 TEX11Q8IYF3 940 aa14.1□□□□□ -0.15
PTPRK-203ENST00000368207 KIF18AQ8NI77 898 aa14.1□□□□□ -0.15
PTPRK-203ENST00000368207 CALM1P0DP23 149 aa14.1□□□□□ -0.15
PTPRK-203ENST00000368207 CALM2P0DP24 149 aa14.1□□□□□ -0.15
PTPRK-203ENST00000368207 CALM3P0DP25 149 aa14.1□□□□□ -0.15
PTPRK-203ENST00000368207 AOPEPQ8N6M6 819 aa14.1□□□□□ -0.15
PTPRK-203ENST00000368207 A2ML1A8K2U0 1454 aa14.1□□□□□ -0.15
PTPRK-203ENST00000368207 A0A0D9SFI3 127 aa14.1□□□□□ -0.15
PTPRK-203ENST00000368207 MYL10Q9BUA6 226 aa14.1□□□□□ -0.15
PTPRK-203ENST00000368207 HDAC9Q9UKV0 1011 aa14.1□□□□□ -0.15
PTPRK-203ENST00000368207 PALD1Q9ULE6 856 aa14.1□□□□□ -0.15
PTPRK-203ENST00000368207 ZNF532Q9HCE3 1301 aa14.1□□□□□ -0.15
PTPRK-203ENST00000368207 RTL9Q8NET4 1388 aa14.1□□□□□ -0.15
PTPRK-203ENST00000368207 BMP15O95972 392 aa14.09□□□□□ -0.15
PTPRK-203ENST00000368207 LIG1P18858 919 aa14.09□□□□□ -0.15
PTPRK-203ENST00000368207 TYRO3Q06418 890 aa14.09□□□□□ -0.15
PTPRK-203ENST00000368207 KIF4BQ2VIQ3 1234 aa14.09□□□□□ -0.15
PTPRK-203ENST00000368207 CCDC40Q4G0X9 1142 aa14.09□□□□□ -0.15
PTPRK-203ENST00000368207 TDRD12Q587J7 1177 aaKnown RBP14.09□□□□□ -0.15
PTPRK-203ENST00000368207 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.09□□□□□ -0.151e-9■■□□□ 13.6
PTPRK-203ENST00000368207 STAT6P42226 847 aa14.09□□□□□ -0.15
PTPRK-203ENST00000368207 DNA2P51530 1060 aa14.09□□□□□ -0.15
PTPRK-203ENST00000368207 PTH1RQ03431 593 aa14.09□□□□□ -0.15
PTPRK-203ENST00000368207 RRAGBQ5VZM2 374 aa14.09□□□□□ -0.15
PTPRK-203ENST00000368207 N4BP3O15049 544 aa14.09□□□□□ -0.15
PTPRK-203ENST00000368207 SPATA5Q8NB90 893 aa14.09□□□□□ -0.15
PTPRK-203ENST00000368207 TRIM47Q96LD4 638 aa14.09□□□□□ -0.15
PTPRK-203ENST00000368207 AATFQ9NY61 560 aaKnown RBP eCLIP14.09□□□□□ -0.15
PTPRK-203ENST00000368207 ANGEL1Q9UNK9 670 aaKnown RBP14.09□□□□□ -0.15
PTPRK-203ENST00000368207 FGFR1OPO95684 399 aaKnown RBP14.09□□□□□ -0.15
PTPRK-203ENST00000368207 LMOD1P29536 600 aaPredicted RBP14.09□□□□□ -0.15
PTPRK-203ENST00000368207 CTSWP56202 376 aa14.09□□□□□ -0.15
PTPRK-203ENST00000368207 RBM17Q96I25 401 aaKnown RBP14.09□□□□□ -0.15
PTPRK-203ENST00000368207 CARD10Q9BWT7 1032 aa14.09□□□□□ -0.15
PTPRK-203ENST00000368207 IBTKQ9P2D0 1353 aaPredicted RBP14.08□□□□□ -0.15
PTPRK-203ENST00000368207 MAP3K4Q9Y6R4 1608 aa14.08□□□□□ -0.16
PTPRK-203ENST00000368207 GSDMDP57764 484 aa14.08□□□□□ -0.16
PTPRK-203ENST00000368207 CCDC186Q7Z3E2 898 aa14.08□□□□□ -0.16
PTPRK-203ENST00000368207 EHMT1Q9H9B1 1298 aa14.08□□□□□ -0.16
PTPRK-203ENST00000368207 A0A1B0GVL5 298 aa14.08□□□□□ -0.16
PTPRK-203ENST00000368207 KIF20AO95235 890 aa14.08□□□□□ -0.16
PTPRK-203ENST00000368207 TNNI2P48788 182 aa14.08□□□□□ -0.16
PTPRK-203ENST00000368207 UBASH3AP57075 661 aa14.08□□□□□ -0.16
PTPRK-203ENST00000368207 CTDSPL2Q05D32 466 aa14.08□□□□□ -0.16
PTPRK-203ENST00000368207 PATL2C9JE40 543 aaKnown RBP14.08□□□□□ -0.16
PTPRK-203ENST00000368207 EYA3Q99504 573 aa14.08□□□□□ -0.16
PTPRK-203ENST00000368207 PYM1Q9BRP8 204 aaKnown RBP14.08□□□□□ -0.16
PTPRK-203ENST00000368207 MYO6Q9UM54 1294 aa14.08□□□□□ -0.16
PTPRK-203ENST00000368207 KIF2AO00139 706 aaPredicted RBP14.07□□□□□ -0.16
PTPRK-203ENST00000368207 CALML3P27482 149 aa14.07□□□□□ -0.16
PTPRK-203ENST00000368207 UNC5CLQ8IV45 518 aa14.07□□□□□ -0.16
PTPRK-203ENST00000368207 ARAP3Q8WWN8 1544 aa14.07□□□□□ -0.16
PTPRK-203ENST00000368207 ZNF335Q9H4Z2 1342 aaPredicted RBP14.07□□□□□ -0.16
PTPRK-203ENST00000368207 KIF5CO60282 957 aa14.07□□□□□ -0.16
PTPRK-203ENST00000368207 JAK2O60674 1132 aa14.07□□□□□ -0.16
PTPRK-203ENST00000368207 MCM7P33993 719 aa14.07□□□□□ -0.16
PTPRK-203ENST00000368207 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.07□□□□□ -0.16
PTPRK-203ENST00000368207 ZBTB1Q9Y2K1 713 aa14.07□□□□□ -0.16
PTPRK-203ENST00000368207 BCORL1Q5H9F3 1711 aa14.07□□□□□ -0.16
PTPRK-203ENST00000368207 YEATS4O95619 227 aa14.07□□□□□ -0.16
PTPRK-203ENST00000368207 BRAPQ7Z569 592 aa14.07□□□□□ -0.16
PTPRK-203ENST00000368207 GGA1Q9UJY5 639 aa14.07□□□□□ -0.16
PTPRK-203ENST00000368207 KRT2P35908 639 aa14.07□□□□□ -0.16
PTPRK-203ENST00000368207 RPS8P62241 208 aaKnown RBP14.07□□□□□ -0.16
PTPRK-203ENST00000368207 ZBTB38Q8NAP3 1195 aaPredicted RBP14.07□□□□□ -0.16
PTPRK-203ENST00000368207 TAF4BQ92750 862 aa14.07□□□□□ -0.16
PTPRK-203ENST00000368207 PUS3Q9BZE2 481 aaKnown RBP14.07□□□□□ -0.16
PTPRK-203ENST00000368207 C6orf50Q9HD87 102 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms